Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1564 ATGGGTTTTCGCTTACCTGGTATTAGACGATCATCATTTAGTGCAAGTCAATCATCTATCAAACAAGTGGAAGTTCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAGAAGGTTCATGATTCCAATATCATTCTTGAATGAGCCTTTATTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAATTCGGTTATTGTCATCCAATGGGAGGTCTTACAATTCCCTGCAAGGAAGACATGTTCTTACATACAGCTTCTGTCTTGAACAGGATATAA 279 0.3835 MGFRLPGIRRSSFSASQSSIKQVEVPKGYLAVYVGEKMRRFMIPISFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDMFLHTASVLNRI* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1564 92 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
Mtr8g1564 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 90 - -
Mtr8g1564 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1564 Mtr-Chr8 21589423 21590131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1564 14 82 Calmodulin-binding Proteins AT3G43120 53.623 2.11e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1564 K14488 - gmx:100500615 154.451