Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1563 ATGGGTTTCCGTTTACCTGCTATTAGACGAACTTCATTTACAAGTAGCCAAGCATCATCAAAAGTTGTGAATGTACCAAAGGGATATCTTGCGGTATATGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCGAGCTTCCTTTCAAAACTTATTGAGTCAAGCAGAGGAAGAATTTGGATATGATCACCCAATGGGTGGCCTCACGGTTCCTTGCACAGAAGATATTTTCATGGAAATTACTTCTCGCTTCAATGGGCTATAA 279 0.4086 MGFRLPAIRRTSFTSSQASSKVVNVPKGYLAVYVGEQMKRFVIPMSYLNRASFQNLLSQAEEEFGYDHPMGGLTVPCTEDIFMEITSRFNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1563 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 90 IPR003676 GO:0009733
Mtr8g1563 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Mtr8g1563 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1563 Mtr-Chr8 21588641 21589133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1563 14 82 Calmodulin-binding Proteins AT3G43120 49.275 2.52e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1563 K14488 - gmx:100817347 154.066