Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1555 ATGACGCTCAACCACACATTGCAGGTTGAAATATCTACTTTGATTGGCAAATGTAGGATATGTATTGGCATTGCAAGTGGGCTTGCGTTTCTCCACGAGGAAGTACAACCGCATATTGTTCACGGGGAACTAACCAGTACCAATATTCTCCTTGACAAAGACCTTACACCTAAGATTTCAGATGTTGGTCTATCAAAACTTATATCCGTGACTCGTGTTATCATCACCGCGTCTGTATATGCACCAGAGGTTATCATGACACATGAATCAGATGTTTACAGTTATGGGATCCTTCTTGTGGAGATAGTTGGTGGGAGATATATCCAATCTATTGTAGAGCAAACATGGGAGCATTATAAGCAAAAGAAATTGGTGGAGTTGATAGACATATCACTAAACAAGGAGTTGTGTGTGGAGGAGGCTTGTAAATATCTGAAGATTGCCTTGCTTTGCATTCAGGATTGA 465 0.4065 MTLNHTLQVEISTLIGKCRICIGIASGLAFLHEEVQPHIVHGELTSTNILLDKDLTPKISDVGLSKLISVTRVIITASVYAPEVIMTHESDVYSYGILLVEIVGGRYIQSIVEQTWEHYKQKKLVELIDISLNKELCVEEACKYLKIALLCIQD* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1555 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1555 154 Gene3D Transferase(Phosphotransferase) domain 1 4 154 - -
Mtr8g1555 154 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 18 154 - -
Mtr8g1555 154 SUPERFAMILY Protein kinase-like (PK-like) 17 148 IPR011009 -
Mtr8g1555 154 Pfam Protein tyrosine and serine/threonine kinase 16 104 IPR001245 GO:0004672|GO:0006468
Mtr8g1555 154 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 18 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1555 Mtr-Chr8 21457152 21459049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1555 19 151 Receptor kinase-like Gene Family AT1G53420 43.590 1.51e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1555 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1555 - - mtr:MTR_8g461230 291.197