Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1553 ATGAAGGACTTAATCCGCAAACTCTCAGCCAAATTGCGGAGAAACCACACTATCCTAAGATCCGACTCAACCCTGCAGGACAGACTATTACAAAAGAATGACGTCCCAGAGGGTCATGTGCCGGTGTATGTAGGAGAGGAGATGAAGCTGTTTGTGATCAACGCGGAGCTGCTGAACCATCCAGTTTTCGTCAACCTCTTAAACCGGGCTGCTCAAGAGTATGGTTATCAACACGAAGGAGTGCTTCGAATCCCCTGCAAGGTCGCCGTGTTTGAACGAGTTCTTGAAGTGCTTCGACGCAATGGTGACTCGAGTGTACTTCATGACATTCTCAGTTCCGATGAGTTGTTTTAG 354 0.4802 MKDLIRKLSAKLRRNHTILRSDSTLQDRLLQKNDVPEGHVPVYVGEEMKLFVINAELLNHPVFVNLLNRAAQEYGYQHEGVLRIPCKVAVFERVLEVLRRNGDSSVLHDILSSDELF* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1553 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 113 IPR003676 GO:0009733
Mtr8g1553 117 Pfam Auxin responsive protein 17 98 IPR003676 GO:0009733
Mtr8g1553 117 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 9 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1553 Mtr-Chr8 21425008 21425599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1553 35 116 Calmodulin-binding Proteins AT2G24400 40.244 3.95e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1553 K14488 - sind:105175082 129.413