Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1549 ATGCTTCCTTGTATTAGCATTTATACAAGAACAAGATTGATGATAATGTTACCCCATTTTCTTTCTGTACTATCTTCAGTCCTTACTATTTTGGTTTTGATACAAGCTCAGGATCAATCAGGATTCATTAGCTTAGATTGTGGGCGACCTGAAGATGCGAACTATTCTTCGTTGGAGACAGGCATAAATTACATTTCAGATGCCAAATTCATCCTCGATAAAGGTGTAAGTAAGAGCATACAACCTACGAAAGAGTTTTCTCGACAGGAACTAGAGAAAGTGAGGAGCTTTCCAAGTGGAGTGAGAAACTGTTACAAAATAAATGTAACAAGTGGTACTAAATATTTAATAAGAGCTTCTTTCTATTATGGAAACTATGATAATCTAAATGAACCACCACAATTTGATCTTCATTTTGGAGCTAATGTGTGGGATACAGTGAAGTTGTTCTCCAATGCATCACACATCACTATCAAGGAGATTATTTACACTCCATCAGTAGATTACATAAAACCATGTCTTGTTAACACAGGCAAAGGGACTCCATTCATTTCAGCCATAGAATTGAGGGCTATGAACAATACGTATACGGCTTATGGCACATACGAACCTAAATCAGTATTATCACTCATCAAGCGATGCAATTTAGGTTCCACGACAGACATAAAATACAGGTACAGAAAGGATGTTTATGACCGCAACTGGATGCCGTGTAAATTACCAAGTGTTTGCAGACGATTAAATACCTCCGTTAAGAATGTTGAGAAACTGGCTGGAAATGAAACTAGAGAACCAAATATCACTATCAATGACAATGTTTTGAAAGGAGACTTCAACAAGTTCTTGAAAGTAAGAACCGTTGCGGGTGCAACACCTTTGACTGGAGCCACAAGGTATCAAATTTCTCTTTCTAGGACACAGAATTCAACCCTTCCACCCATCCTAAATGCATTTGAGATTTATATGGGAAAAGTCTTCTCACAATCAGAAACTCAACAGGATGATGTTGATGCTATCACAAACGTCAAGGATGCTTATAAGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGGGAATTATATGTGGGAAGGCCTAAATTGTAGCATTGATGGATATAGCATCCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGACTGAGAGGGAATATATCATCTTACATCTCAAAGCTCACAATGTTACAAAACTTAGATTTATCAAACAATAGTTTGAACGGTCCCTTACCTGATTTTCTGGTGCAACTGCAATCACTGCAAGTCTTAAATGTGAGGAAGAACAAACTTAGAGGGTTTGTTCCAAGTGAACTCCTTGAGAGACATAAAACAGGTTCACTGTCATTGAGTGTAGATGATAATCCTGATCTTTGTATGACGAAATCATGTGGAAAGAACGATTTTTTAGTACCACTTATTGCATTAGTTGTAATGGTTTCGATTTTTCTTGTATGTTGGATATTCAGAACACTAAAAGTAGCTACGTGCTCAAATTCTAAGAAAAGGCGTTGGATGAAATCAAAGCATCAAACATTCAGTTACACTGAAATTCTCAATATTACTGATAACTTCAAAACAGTTATTGGAGAAGGAGGATTTGGAAAAGTTTACATTGGCATTTTACATGATCGCACTCAAGTAGCGGTAAAAATGCTTTCAAAATCATCAAAGCAAGGTTATAAGGAATTTCAATCTGAGGCGCAACTTCTAATGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGGTATTGTGATGAAGGTGAAAAAAAGGCATTGATTTATGAATACATGGGCAACGGAAATGTTCAACAACACTTGTTAGAAGATTATGCAAATGTCTTAAAATGGAATGAGAGACTCAAAATCGCAGTTGATGCAGCATATGGATTGGAATATCTGCATAATGGATGTAAACCAGCAATTATGCATAGAGATTTGAAGCTTACCAACATATTACTAGATGAGAATATGCAAGCCAAGATAGCTGATTTTGGCCTAAGTAGAGCTTTCGGTAACGATATTGATTCTCATATATCGACTCAACCTGCTGGTACACTAGGTTATGTTGATCCTGCATATCAGAGAACAGGAAACACAAATAAAAAAAATGATATCTACAGCTTTGGAATAATTCTATTTGTGTTGATCACTGGTCATGAAGCAATAATAAGAGCAGCTGGAGAAAACATTCACATACTTGAATGGGTTATTCCTGTAATTGAAGAAGGAGATATTGAGAAACTTTTTGATCCAAAGTTGGAGGGTGAGTTTAGCATAAATTCAGCACAAAAAGTTGTAGAGATTGCCATGTCATGCATTTCACCAAATGCAACAGAAAGGCCAGACATTAGCCAAATATTGGCAGAATTGAGGGAGTGTCTATCTTTTGAAATGGATCACCATTTATAA 2433 0.3658 MLPCISIYTRTRLMIMLPHFLSVLSSVLTILVLIQAQDQSGFISLDCGRPEDANYSSLETGINYISDAKFILDKGVSKSIQPTKEFSRQELEKVRSFPSGVRNCYKINVTSGTKYLIRASFYYGNYDNLNEPPQFDLHFGANVWDTVKLFSNASHITIKEIIYTPSVDYIKPCLVNTGKGTPFISAIELRAMNNTYTAYGTYEPKSVLSLIKRCNLGSTTDIKYRYRKDVYDRNWMPCKLPSVCRRLNTSVKNVEKLAGNETREPNITINDNVLKGDFNKFLKVRTVAGATPLTGATRYQISLSRTQNSTLPPILNAFEIYMGKVFSQSETQQDDVDAITNVKDAYKVARNWQGDPCGPGNYMWEGLNCSIDGYSIPRITSLNLSSSGLRGNISSYISKLTMLQNLDLSNNSLNGPLPDFLVQLQSLQVLNVRKNKLRGFVPSELLERHKTGSLSLSVDDNPDLCMTKSCGKNDFLVPLIALVVMVSIFLVCWIFRTLKVATCSNSKKRRWMKSKHQTFSYTEILNITDNFKTVIGEGGFGKVYIGILHDRTQVAVKMLSKSSKQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEGEKKALIYEYMGNGNVQQHLLEDYANVLKWNERLKIAVDAAYGLEYLHNGCKPAIMHRDLKLTNILLDENMQAKIADFGLSRAFGNDIDSHISTQPAGTLGYVDPAYQRTGNTNKKNDIYSFGIILFVLITGHEAIIRAAGENIHILEWVIPVIEEGDIEKLFDPKLEGEFSINSAQKVVEIAMSCISPNATERPDISQILAELRECLSFEMDHHL* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1549 810 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Mtr8g1549 810 Gene3D Phosphorylase Kinase; domain 1 501 604 - -
Mtr8g1549 810 ProSiteProfiles Protein kinase domain profile. 529 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1549 810 Gene3D Ribonuclease Inhibitor 336 463 IPR032675 -
Mtr8g1549 810 Pfam Protein tyrosine and serine/threonine kinase 531 798 IPR001245 GO:0004672|GO:0006468
Mtr8g1549 810 CDD STKc_IRAK 535 798 - -
Mtr8g1549 810 Pfam Malectin-like domain 255 322 IPR024788 -
Mtr8g1549 810 Pfam Malectin-like domain 45 252 IPR024788 -
Mtr8g1549 810 SMART serkin_6 529 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1549 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Mtr8g1549 810 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 251 807 - -
Mtr8g1549 810 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 30 250 - -
Mtr8g1549 810 PANTHER OS07G0107800 PROTEIN-RELATED 251 807 - -
Mtr8g1549 810 PANTHER OS07G0107800 PROTEIN-RELATED 30 250 - -
Mtr8g1549 810 Gene3D Transferase(Phosphotransferase) domain 1 605 808 - -
Mtr8g1549 810 SUPERFAMILY L domain-like 361 457 - -
Mtr8g1549 810 SUPERFAMILY Protein kinase-like (PK-like) 510 798 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1549 Mtr-Chr8 21371778 21377028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1549 27 805 Receptor kinase-like Gene Family AT1G05700 43.986 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr8g1549 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1549 - - mtr:MTR_8g461120 1517.67