Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1547 ATGAAACATTGTATGTTGAGTTCTTCATTTGTTATTTCTCTCTGTGTCTTCAGCTTGATTAACTTTGCACACTTTGAACAAGCACAAGCACAAACTCAAACTTCAAATGCTACTACAGATCCTTCTGAAGCAAGAGTTGTAAATTCAATATTTAGCAAATGGAAGATATCAGCAAATCAAACTCAATGGAACGTAACCGGTGATATATGCAGTGGAGGAGCCATCGATACCGTCATCGATGACAACACTTATAACCCTTTCATCAAATGCGATTGTTCCTTTAACAAAAACACTACTTGCCGCATCATCGCACTGAAAGTTTATGCAATAGATGTGATTGGTGAAATTCCAGCTGAGCTATGGACTCTTACTTATCTCACCAATTTGAACCTTGGCCAGAATTACTTGAACGGATCTCTACCTCCGGCAGTTGGAAATCTGACTCGTATGCAATACATGTCCATTGGCATCAATGCTTTATCAGGAAAACTTCCAAAGGAATTGGGAGATCTAACTGAGTTGATTGTATTGGGTATTGGGACTAATAACTTCTCAGGATCTCTGCCATCTGAACTAGGGAAGCTGACAAAACTAGAACAACTCTACATGGATAGTTCTGGAATCAGTGGTCCAATTCCGCCCACATTTGCAAGCCTTAAGAATTTGGTGACATTATGGGCTTCAGACAATGAACTCACAGGTAGAATACCGGACTTCATTGGAAATTGGACTAAGCTTCAATCCTTGAGGTTTCAGGGTAATTCTTTTGAAAGTCCAATTCCCTCGTCATTGTCCAATTTGACTTCTTTGACAGACATAAAGATAAGTGGTTTACTTAATGGGAGCTCCTCATTGGATGTAATAAGGAACATGAAGTCCTTAACGATCTTAGACTTGAGGTATAACAATATTTCTGGTTCAATTCCTTCCACCATAGGAGAATTTGAAAATTTGACTTATCTGGATTTAAGCTTCAATAGCCTCTCAGGACAAATTCCTGGATCGATTTTCAATTTGACTTCGCTCACTTCCTTGTTTCTTGGAAATAACACATTTAGTGGCACTCTCCCTCCGCAGAAAAGCTCATCTCTTATCAACATAGACTTGTCATACAATGATCTATCAGGAAGCCTCCCCTCTTGGATAAACGAACCAAATTTACAACTGAACATAGTTGCCAACAATTTGACAATAGGAAATTCAAATATCAGTGGTTTGCCTATTGGGCTTAACTGTCTTCAGAAAAATTTTCCATGCAATCGTGGTGTTGGACGATATTCAGACTTTGCGATCAAGTGTGGTGGTCCCCAACTAACTACAGATGGAATTGTGTATGAAAAAGACAATGAGACACTTGGTCCTGCTACTTACTTTGTTACTGATACAAATAGATGGGCCGTTAGTAATGTTGGATTATTTACCGGAAACCCCAATCCTCTGTTCCAAAGTATTGGCTCAAATGAGTTCAACGGTACTGTGAATTCGGAGCTTTTAGAACATTTGATCTGGACTTTACAACAAAGAGTTTTGTTACAAACTGCTCGTATCTCTGCCTCATCATTAAGATATTATGGTCTGGGGCTACAAAATGGTTTTTACAACATTACCCTCCAATTTGCGGAAACAACTATTCTGGATTCTCCAACATGGAAAAGCCTCGGGAGACGAATCTTTGATATTTATATCCAGGGAACTCGTGTTTTGAAGGATTTTGACATACAAAAAGAAGCTGGAGGCGTCTCTTACAGTGCAGTTCAAAAGCAATTTAGGTTTGAAGTTAAAGAAAACTATCTCGAGGTCCATCTTTTTTGGCCCGGAAAAGGGACTTGCTGCATACCCGGCCAAGGTACTTATGGGCCCTTGATTCAAGCCATCAGTGCTACCCCAGATTTTGTACCTACTGTCAACAGTAAACCTCCCAGCAGCAAAAAGAATAAAGTGGGTCTAATCATTGGAGTTGTTGTGGGGGTTGGAGCTGTTTGCTTCCTAGCAGTTTCTTCCATTTTCTATATCCTTAGGAGAAGAAAACTCTATAATGACGATGATGATCTTGTAGGCATTGATACGATGCCAAACACTTTCAGCTATTATGAGTTAAAAAATGCTACAAGTGACTTCAATCGTGACAATAAACTTGGAGAGGGGGGTTTTGGACCTGTGTATAAGGGGACTCTTAATGATGGAAGATTTGTAGCTGTGAAACAATTATCTATAGGATCCCATCAAGGAAAGAGCCAGTTTATAGCTGAGATTGCTACTATATCCGCTGTTCAACACCGAAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAATAAAAGACTTCTTGTCTACGAGTATTTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATTCCTTAATTGGTCGACCCGTTATGATGTTTGTATGGGTGTTGCAAGAGGATTGACATATTTACACGAGGAGTCACGACTCCGAATTGTGCACCGTGATGTGAAAGCTAGTAATATTCTACTCGACTCTGAGCTTGTCCCAAAATTATCTGACTTTGGATTGGCCAAATTATATGATGATAAAAAAACGCATATCAGCACCCGTGTTGCAGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACGACTCACCGAGAAAGCGGATGTTTTTTCCTTTGGTGTTGTGGCTCTGGAGTTAGTTAGTGGGAGACCAAATTCTGATTCAAGTTTGGAAGAAGATAAGATGTATCTTCTAGACTGGGCTTGGCAGCTTCATGAAAGAAACTGTATAAATGATCTGATAGATCCTAGACTATCAGAATTCAACATGGAAGAAGTCGAACGCCTTGTGGGAATAGGATTGTTGTGCACTCAGACATCACCAAATTTACGACCATCAATGTCACGTGTAGTGGCAATGCTTTTAGGAGATATTGAAGTGAGCACAGTAACATCAAGGCCCGAATACTGGACTGACTGGAAATTTGGCGACGTGAGCAGCATCATGACTGACACTTCAGCAGAGGGATTAGATACAAGTAATTACAATTCAACAGCAAGTACAAGCATAGTTAGTGGTGCATATATTCATTCACCAAATGATCCTTCTAAATCCATCCTTCATGACAATCTTAGAGATGATGGTTGGTAA 3147 0.3972 MKHCMLSSSFVISLCVFSLINFAHFEQAQAQTQTSNATTDPSEARVVNSIFSKWKISANQTQWNVTGDICSGGAIDTVIDDNTYNPFIKCDCSFNKNTTCRIIALKVYAIDVIGEIPAELWTLTYLTNLNLGQNYLNGSLPPAVGNLTRMQYMSIGINALSGKLPKELGDLTELIVLGIGTNNFSGSLPSELGKLTKLEQLYMDSSGISGPIPPTFASLKNLVTLWASDNELTGRIPDFIGNWTKLQSLRFQGNSFESPIPSSLSNLTSLTDIKISGLLNGSSSLDVIRNMKSLTILDLRYNNISGSIPSTIGEFENLTYLDLSFNSLSGQIPGSIFNLTSLTSLFLGNNTFSGTLPPQKSSSLINIDLSYNDLSGSLPSWINEPNLQLNIVANNLTIGNSNISGLPIGLNCLQKNFPCNRGVGRYSDFAIKCGGPQLTTDGIVYEKDNETLGPATYFVTDTNRWAVSNVGLFTGNPNPLFQSIGSNEFNGTVNSELLEHLIWTLQQRVLLQTARISASSLRYYGLGLQNGFYNITLQFAETTILDSPTWKSLGRRIFDIYIQGTRVLKDFDIQKEAGGVSYSAVQKQFRFEVKENYLEVHLFWPGKGTCCIPGQGTYGPLIQAISATPDFVPTVNSKPPSSKKNKVGLIIGVVVGVGAVCFLAVSSIFYILRRRKLYNDDDDLVGIDTMPNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRFVAVKQLSIGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGNKRLLVYEYLENKSLDQALFGNVLFLNWSTRYDVCMGVARGLTYLHEESRLRIVHRDVKASNILLDSELVPKLSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGRLTEKADVFSFGVVALELVSGRPNSDSSLEEDKMYLLDWAWQLHERNCINDLIDPRLSEFNMEEVERLVGIGLLCTQTSPNLRPSMSRVVAMLLGDIEVSTVTSRPEYWTDWKFGDVSSIMTDTSAEGLDTSNYNSTASTSIVSGAYIHSPNDPSKSILHDNLRDDGW* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1547 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 140 1025 - -
Mtr8g1547 1048 Gene3D Transferase(Phosphotransferase) domain 1 782 984 - -
Mtr8g1547 1048 Gene3D Phosphorylase Kinase; domain 1 679 781 - -
Mtr8g1547 1048 Gene3D Ribonuclease Inhibitor 39 280 IPR032675 -
Mtr8g1547 1048 Pfam Leucine rich repeat 293 350 IPR001611 GO:0005515
Mtr8g1547 1048 Pfam Protein tyrosine and serine/threonine kinase 709 973 IPR001245 GO:0004672|GO:0006468
Mtr8g1547 1048 Gene3D - 428 628 - -
Mtr8g1547 1048 ProSiteProfiles Protein kinase domain profile. 706 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1547 1048 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 140 1025 - -
Mtr8g1547 1048 SUPERFAMILY L domain-like 101 412 - -
Mtr8g1547 1048 Gene3D Ribonuclease Inhibitor 281 412 IPR032675 -
Mtr8g1547 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Mtr8g1547 1048 ProSiteProfiles Leucine-rich repeat profile. 317 339 IPR001611 GO:0005515
Mtr8g1547 1048 SMART serkin_6 706 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1547 1048 SUPERFAMILY Protein kinase-like (PK-like) 689 991 IPR011009 -
Mtr8g1547 1048 CDD STKc_IRAK 712 973 - -
Mtr8g1547 1048 Pfam Malectin domain 428 625 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1547 Mtr-Chr8 21282458 21299546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1547 150 999 Receptor kinase-like Gene Family AT1G56120 62.911 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1547 PK_Tyr_Ser-Thr 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1547 - - mtr:MTR_8g445800 2023.82