Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1512 ATGATAAGCTTTAAAATAGAGAAACAAGTTGTATTGATATACTTATGGTTGTGGTGGATTACTACTACTAATATTTGTGTTAAAGCTATGAAAGATAGTTTAAGGCCAGGTGATACATTGAATTCCAATTCCTCTCTATGTTCTAAACAAGGCAAGTATTGTCTTCAATTCAGCAACACTATGGCCATTATAACATACCGTTGTTTGGTTATAAGTACTGATAACGACACAAGAGTGTGGATGTACGATAGAAATCAACCCGTAGACGTAAAATCAGCAGTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGAATCTCAAAATAGGAAATTACCAATAATCATTTACTCTTCACCTCAACCTACCAACAACACTATGGCCACTATTTTAGACACGGGTAACTTTGTGCTTCAACAACTTCACCCAAATGGGACAAAGAGTATATTATGGCAGAGTTTTGATTATCCCACAAATGATTTGATCCCAACGATGAAGTTGGGAGTTAATCGAAAAACTGGACATAATTGGTCATTGGTTTCATGGATGACTCCTATTCTTATAAATTCAGGTGAGTTTAGTCTTGAATGGGAACCAAAACAAGGTGAATTGAACATCAAGAAACGCAGCATAGTGTATTGGAAAAGTGGAAAACTTAAAAGCAATGGAATATTCGAGAACATTCCCGCGAATGTTCAACATATGTATCAGTACATTATTGTCTCTAACAAGACGGAAGAGTCTTTCTCTTTCGAAGTTAGAGATGGAAAGTTAATGCAATGGTACCTATCCCCGAAGGGGAGGTTAGTAGGTGATGATGGATATATTGCTAATACAGATATGTGTTATGGATATAATAATGATGGAGGGTGCCAAAAATGGGAGGATGTACCAACTTGCAGGGAACCTGGTGAGATGTTTCAGGAAAAGGCGGGAAGACCAAGCACGGACAATTCAACGTGGTGGTTTGAACGGGATGTGACTTATAGTTACAGTGATTGCAAGATGAGATGTTGGAAAAATTGTAGCTGCAATGGATTCCAAGTATTGTATGATAATTTGACTGGATGTATATTCTATTTATGGAATTCGACACAAGATGTTCACATGGTTCCGAATACCTTTTACACCTTGGTAAAGCCAACAAAATCAACTCCGAATTCCCATGTCAATGCAGGTAGAAGGTGGATATGGATAGGTGCTGCAATCGCATCTGCTTTACTCATATTATGTCCACTCCTTTTATGCTTAGTCAAAAAGAAACAAAAATATGCACTTAAAGATAAGAAAACTAAAGATTTGGCGGATTCCAATAAATCATATGATATCAAAGATCTTGAAGACGATTTCAAGGGACATGATATAAAAGTTTTTAACTTTACATCAATTTTGGAAGCAACTATGGAGTTTTCCCCAGAAAACAAATTAGGACAGGGAGGCTATAGACCTGTTTACAAGGTGATTTTAACCTATTTATTTGTGATTACTTCAAATCCATTATTTTATTCAAAGTTTGATATTGTAACTACAAAAAGTGTATTTTATGCTAAGAACCAAAAGAAAAGTATTTACAGAAATGCAAGTAAATTTTTTCCTTTTGTTTTACGATGTCATGGAATCTTGGCAACAGGGCAAGAAGTTGTTGTAAAAAGACTCTCAAAAACATCTGGACAAGGAATTGTGGAATTCAAAAATGAATTGGTATTGATATGTGAGCTTCAGCACACAAACCTTGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAAAGGATTCTAATTTACGAATACATGCGAAACAAAAGCTTCGATTTCTATCTATTTTATTGTACAAAAAAGAAGTTGCTAGATTGGAAGAAGCGTTTGTACATAATAGAAGGAATTGCTCAAGGATTACTTTATCTTCTTAAGTACTCAAGACTCAAAATCATTCATAGAGACTTGAAGGCTAGCAACATACTTCTTGATGAGAATATGAATGCAAAAATTTCTGATTTCGGTATGGCAAGAATGTTCGCCCAGCAAGAATCAACCGTTAACACGAATAGGATTGTTGGGACATATGGATACATGTCTCCAGAATATGATGAAGGAATTTGTTCAACAAAGTCTGATGTATATAGCTTTGGAGTGTTGCTTCTTGAAATTATTTGTGGAAGAAAAAACAATAGCTTTTATGATGTTGATCGCCCACTAAACCTAATACGACATGCATGGGAGCTATGGAACGATGGTGAGTATCTACAATTATTGGATCCATCATTAAATGACACTTTTGTTCCCGAATAAGTGCAAAGGTGCATTCATGTTGGTCTCTTATGTGTTGAGCATTATGCAAATGATCGTCCAACAATGTCTGATGTTATATCAGTGTTAACAAACAAATATGAACTCACAACCATACCAAAAAGACCAGCATTCTATGTTAGAAATGAGATATTTGACGGGGAAAGTACTTCAAAAGTGTCTGACACATATTCTATGACAGGGATTTCTACCTCATGTGAAGTAGAAGTGAAAATATAA 2526 0.3543 MISFKIEKQVVLIYLWLWWITTTNICVKAMKDSLRPGDTLNSNSSLCSKQGKYCLQFSNTMAIITYRCLVISTDNDTRVWMYDRNQPVDVKSAVLSLDYSGVLKIESQNRKLPIIIYSSPQPTNNTMATILDTGNFVLQQLHPNGTKSILWQSFDYPTNDLIPTMKLGVNRKTGHNWSLVSWMTPILINSGEFSLEWEPKQGELNIKKRSIVYWKSGKLKSNGIFENIPANVQHMYQYIIVSNKTEESFSFEVRDGKLMQWYLSPKGRLVGDDGYIANTDMCYGYNNDGGCQKWEDVPTCREPGEMFQEKAGRPSTDNSTWWFERDVTYSYSDCKMRCWKNCSCNGFQVLYDNLTGCIFYLWNSTQDVHMVPNTFYTLVKPTKSTPNSHVNAGRRWIWIGAAIASALLILCPLLLCLVKKKQKYALKDKKTKDLADSNKSYDIKDLEDDFKGHDIKVFNFTSILEATMEFSPENKLGQGGYRPVYKVILTYLFVITSNPLFYSKFDIVTTKSVFYAKNQKKSIYRNASKFFPFVLRCHGILATGQEVVVKRLSKTSGQGIVEFKNELVLICELQHTNLVQLLGCCIHEEERILIYEYMRNKSFDFYLFYCTKKKLLDWKKRLYIIEGIAQGLLYLLKYSRLKIIHRDLKASNILLDENMNAKISDFGMARMFAQQESTVNTNRIVGTYGYMSPEYDEGICSTKSDVYSFGVLLLEIICGRKNNSFYDVDRPLNLIRHAWELWNDGEYLQLLDPSLNDTFVPE*VQRCIHVGLLCVEHYANDRPTMSDVISVLTNKYELTTIPKRPAFYVRNEIFDGESTSKVSDTYSMTGISTSCEVEVKI* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1512 840 SUPERFAMILY Protein kinase-like (PK-like) 456 811 IPR011009 -
Mtr8g1512 840 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 538 815 - -
Mtr8g1512 840 PIRSF SRK 4 272 IPR024171 GO:0004674
Mtr8g1512 840 PIRSF SRK 537 838 IPR024171 GO:0004674
Mtr8g1512 840 PIRSF SRK 276 496 IPR024171 GO:0004674
Mtr8g1512 840 Pfam D-mannose binding lectin 77 182 IPR001480 -
Mtr8g1512 840 Pfam Protein tyrosine and serine/threonine kinase 543 789 IPR001245 GO:0004672|GO:0006468
Mtr8g1512 840 Gene3D Phosphorylase Kinase; domain 1 442 497 - -
Mtr8g1512 840 ProSiteProfiles Protein kinase domain profile. 470 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1512 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 490 - -
Mtr8g1512 840 Gene3D - 25 154 IPR036426 -
Mtr8g1512 840 SMART blect_4 37 157 IPR001480 -
Mtr8g1512 840 ProSiteProfiles Bulb-type lectin domain profile. 31 151 IPR001480 -
Mtr8g1512 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 538 815 - -
Mtr8g1512 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Mtr8g1512 840 Gene3D Transferase(Phosphotransferase) domain 1 598 803 - -
Mtr8g1512 840 SMART serkin_6 470 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1512 840 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 490 - -
Mtr8g1512 840 Gene3D Phosphorylase Kinase; domain 1 503 597 - -
Mtr8g1512 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 185 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1512 Mtr-Chr8 19994585 19998496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1512 424 810 Receptor kinase-like Gene Family AT3G45860 45.013 3.83e-102 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1512 PK_Tyr_Ser-Thr 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1512 - - mtr:MTR_1g081665 903.279