Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1506 ATGGTTTGCACTGAAAAAGGAAAACCTCGAGTTTTGCTTTTCTTTACATACTTGTGCTTGTGGTGGTGGTGGTTTACTACTACTTCTATCTATGTCAAAGCAGAAAATACTGATAGTATGAAGCCAGGAGATATACTGAATGTCAGTGCCACATCTACGTTGTGTTCTAAACAAGGTAAATATTGCATGAGTTTTAACCAAAATACGGATCCTGAAAACCTCACTTATCTCAGCATATTTGGCAAAGGGAAAGATGATTGGTTAGTGTGGATTTCTAACAGAAACCAACCTGTTGACATTAATTCAGCAAGTCTATCACTAAACTACTCTGGTGTGCTAAAAATAGAATCCAAAATTGGTAAACCAATAATCTTGTATGCTTCACCTCCACCTTTTAACAATAGAAATTATATCGTTGCCACGTTGTTGGATACAGGTAACTTTGTGTTGAAAGATATTCAGAAGAACATTGTGTTGTGGCAAAGTTTTGATCATCCAACCGACAGTTTACTCCCTGGTATGAAATTAGGTGTGAATCGTAAAACTGGTGAAAACTGGTCGCTGGTTTCAAGCATTAGTGATTCAATTCTGGCTCCTGGTCCATTCAGTCTTGAATGGGAGGCCACGAGAAAAGAATTGGTTATCAAGCGTAGAGAAAAAGTTTATTGGACAAGTGGAAAACTGATGAAAAACAATAGATTTGAGAATATACCTGGAGAAGATTTCAAGGTCAAAGTTGTGTCTGATGAGTACTTCACATACACAACTCAAAATGAAAACGGTCTTACCAAATGGACTCTATTACAGACTGGGCAACTTATAAACAGAGAAGGAGGTGCGTCTGGTGACATAGCAAGGGCTGATATGTGTAATGGGTATAACACTAACGGAGGGTGCCAAAAATGGGGTGAAGCCAAGATACCTGCTTGCAGGAATCCTGGTGATAAGTTTGAGAACAAGCCCGTTTACAGTAATGACAATATAGTATACAATATAAAAAATGCTAGTTTAGGCATAAGTGATTGCCAAGAAATGTGCTGGGGTAACTGCAGCTGTTTTGGATTCAATAACTACTATGGAAATGGAACTGGTTGTGTCTTCTTGGTATCAACTGAAGGTCTTAACATTGCAAGCAGTGGTTATGAGTTATTTTACATTCTGGTTAAGAACACCGATCACAAAGTAACCAACAACTGGATATGGATTTGCGCTGGAATGGGGACTCTTCTGCTAATTATTGGTCTTTCCATTCTGCTCAGAGCTTTAATGAAAGGAAAACAAGTGCTTCGAGAGGGGGAGAGAATAACAATACAGAATGAGATTCAAGATCTGGAAGCTTATAGAGCATACTGTAATGGGGACGATCTAGAAGGAGATTTAAGCAACGGTGATGACTTAAAAGTGTTTAGCTATTCATCAATAATTGTGGCTACCAATGGCTTTTCTTCTGAAAACAAGTTAGGACAAGGTGGCTTTGGACCTGTTTTCAAGGGAATTCTACCTTCAGGGCAAGAAGTAGCTGTGAAGAAACTTTCAAAAACTTCTGGACAAGGAATGACGGAGTTTAGAAATGAATTAACACTCATTTGTAAGCTTCAGCATACAAATCTTGTTCAACTAATCGGTCATTGCATTCATGAACAAGAGCGGATATTGATCTATGAGTATATGCCCAACAAAAGCTTGGACTTCTTTTTATTTGACTCCACTAGAAGAAAGTTGCTAAACTGGAACAAACGCTTTAACATAATAGAAGGAATTGCTCAAGGATTACTATATCTTCACAAATACTCAAGACTCAGAATTATTCACAGAGATTTGAAGGCTAGTAATATTCTCCTAGATGATAATATGAACCCAAAAATTTCTGATTTTGGTGTGGCAAGAATGTTCACAAAACAAGAAACCGAAGCAAATACCAACAGGATAGTTGGGACATATGGTTACATGTCTCCAGAGTATGCAATGGAAGGAGTTTTTTCGACAAAGTCTGATGTGTACAGCTTTGGAGTCCTGCTCCTCGAAATTATTAGTGGTGAAAAATGCAATAGCATGTACTGTGAAGACAGAGCACTTAATCTAGTTGGACATGCATGGGAGCTATGGAAAGAAGGTGTAGTTCTTCAGTTGGTGGATCCATTACTAAATGAGTCGTTTTCTGAGGATGAGGTGCTAAGATGTGTTCATATTGGTTTATTATGCGTAGAAGAAAATGCAGATGATCGTCCGACAATGTCCAATGTTATATCAATGTTAACTAACAAAATTAAAGTGGATGTTTTGCCTAAGAAACCAGCATACTATGGTGGAACAAGAGTTTTTGATGAAGAAACGTACTGCGAAGAAGTTGGTGTGGATTACACACATGAAAACTCTCATTCACATGTACAATCAATATAG 2400 0.3792 MVCTEKGKPRVLLFFTYLCLWWWWFTTTSIYVKAENTDSMKPGDILNVSATSTLCSKQGKYCMSFNQNTDPENLTYLSIFGKGKDDWLVWISNRNQPVDINSASLSLNYSGVLKIESKIGKPIILYASPPPFNNRNYIVATLLDTGNFVLKDIQKNIVLWQSFDHPTDSLLPGMKLGVNRKTGENWSLVSSISDSILAPGPFSLEWEATRKELVIKRREKVYWTSGKLMKNNRFENIPGEDFKVKVVSDEYFTYTTQNENGLTKWTLLQTGQLINREGGASGDIARADMCNGYNTNGGCQKWGEAKIPACRNPGDKFENKPVYSNDNIVYNIKNASLGISDCQEMCWGNCSCFGFNNYYGNGTGCVFLVSTEGLNIASSGYELFYILVKNTDHKVTNNWIWICAGMGTLLLIIGLSILLRALMKGKQVLREGERITIQNEIQDLEAYRAYCNGDDLEGDLSNGDDLKVFSYSSIIVATNGFSSENKLGQGGFGPVFKGILPSGQEVAVKKLSKTSGQGMTEFRNELTLICKLQHTNLVQLIGHCIHEQERILIYEYMPNKSLDFFLFDSTRRKLLNWNKRFNIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDDNMNPKISDFGVARMFTKQETEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIISGEKCNSMYCEDRALNLVGHAWELWKEGVVLQLVDPLLNESFSEDEVLRCVHIGLLCVEENADDRPTMSNVISMLTNKIKVDVLPKKPAYYGGTRVFDEETYCEEVGVDYTHENSHSHVQSI* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1506 799 PIRSF SRK 283 798 IPR024171 GO:0004674
Mtr8g1506 799 PIRSF SRK 9 280 IPR024171 GO:0004674
Mtr8g1506 799 ProSiteProfiles Bulb-type lectin domain profile. 37 163 IPR001480 -
Mtr8g1506 799 Pfam Protein tyrosine and serine/threonine kinase 484 751 IPR001245 GO:0004672|GO:0006468
Mtr8g1506 799 Gene3D Phosphorylase Kinase; domain 1 454 556 - -
Mtr8g1506 799 Pfam D-mannose binding lectin 89 190 IPR001480 -
Mtr8g1506 799 SMART serkin_6 481 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1506 799 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 13 797 - -
Mtr8g1506 799 Gene3D Transferase(Phosphotransferase) domain 1 557 762 - -
Mtr8g1506 799 ProSiteProfiles Protein kinase domain profile. 481 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1506 799 SUPERFAMILY Protein kinase-like (PK-like) 465 768 IPR011009 -
Mtr8g1506 799 Gene3D - 31 163 IPR036426 -
Mtr8g1506 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 191 IPR036426 -
Mtr8g1506 799 Pfam PAN-like domain 323 367 IPR003609 -
Mtr8g1506 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Mtr8g1506 799 SMART blect_4 45 166 IPR001480 -
Mtr8g1506 799 CDD STKc_IRAK 487 754 - -
Mtr8g1506 799 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1506 Mtr-Chr8 19867840 19871206 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1506 459 768 Receptor kinase-like Gene Family AT3G45860 59.295 1.16e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1506 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1506 - - gmx:100816869 917.146