LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1501	ATGGTTTACACTGAAAAAGGGAAACCTCAAGTTTTGCTTTTCTTCACATACTTGTCCTTATGGTGTATTACTATTTCTACCTATGTCAAAGCAGAAAATACTGATAGTATGAAGCTAGGAGATATACTGAATGCCAGTGCCACATCTAAGTTGTGTTCTAAACAAGGTAGATATTGCATGCATTTTAACCAAAAACCGGATCCTGAAAACCTCACTTATCTCAGCATATTTGGCAAAGGGAAAGATGATTGGTTAGTGTGGATTTCTAACAGAAACCAACCTGTTGACATTAATTCAGCAACTCTATCACTAAACTACTCTGGTGTGCTAAAAATAGAATCCAAAATTGGCAAACCAATAATCCTGTATGCTTCACCACCACCTTTTAACAATAGTAGTTATATCGTTGCCACGTTGTTGGATACAGGTAACTTTGTGTTGAAAGATATTCAGAAGAACCTTGTTTTGTGGCAAAGTTTTGATCATCCAACCGATAGTTTACTCCCTGGGATGAAATTAGGTGTGAATCATAAAACTGGTGAAAACTGGTCACTGGTTTCAAGTATTAGTGATACAATTCTGTCTCCTGGTCCATTCAGGCTTGAGTGGGAAGCCACAAGAAAAGAATTGGTTATCAAGCGTAGAGAAAAAGTTTATTGGACAAGTGGAAAACTGATGAAAAACAATAGATTTATGCATATAACTGGAAAAGATTTCGTGATCAAAGTTGTGTCTGATGAGTACTTCACATACACAACTCTAAATAAAAACGGTCTTACCAAATGGACTCTATTACAGACTGGGCAACTGATAAACAGAGAAGGAGGTGAGTCTGGTGACATAGCAAGGGCAGATATGTGTTATGGGTATAACACTAACGGAGGGTGCCAAAAATGGGGTGAAGCAGGGATACCTACTTGTAGGAATCCTGGTGATAAGTTTGACAACAAGCCAGTTTACGGTAATGACAATATCGTAAACAATATAGAAAATGCTAGTTATGGCATAAGTGATTGCCAAGAAATGTGTTGGAGTAACTGCAGCTGTTTTGGATTCAAATACTTGTATGAGAATGGAACTGGCTGTGTCTTCTTGGAATCAACTGAAGGTCTTAACGTTGCAAGCAGTGGTGATGACTACTTTTACATTTTGATTAAGAACGCCGATCACAAAGTATTTGACAAGTGGATATGGATTTGCGCTGGAATGGGGACTCTTCTGCTAATTATTGGTCTTTCCATTCTGCTCAGAGCTTTAATGAAACGAAAACAAGTGCTTCGAGAGGAGGAAAGAATAAGAATGCAGATTGAGATTCAAGATCTTGAAGCTTCTAGACGATATTGTAATGGCGACGATCTAGAAGGAGATTTGAGCAACGGCGATGACTTAAAAGTGTTTAGCTATTCATCAATAATTGTTGCTACCAGTGGCTTTTCTTCTGAAAACAAGTTAGGACAAGGTGGCTTTGGACCTGTTTTCAAGGGAATTCTACCTTCAGGGCAAGAAGTAGCTGTGAAGAAACTTTCAAAAACTTCTGGACAAGGAATGACCGAGTTTAGAAATGAATTAACTCTCATTTGTAAGCTTCAGCATACCAATCTTGTTCAACTAATCGGTCATTGCATTCATGAACAAGAGCGTATATTGATCTATGAGTATATGCCTAACAAAAGCTTGGACTTCTTTTTATTTGACTCCACTAGAAGAAAGTTGCTAAACTGGAATAAACGCTTTAACATAATGGATGGAATTGCTCAAGGGTTATTATATCTTCACAAATACTCAAGACACAAAATTATTCACAGAGATTTGAAGGCTAGTAATATTCTCCTAGATGATAATATGAACCCAAAAATTTCTGATTTTGGTGTGGCAAGAATGTTCACAAAACAAGAAACCGAAGCAAATACCAACAGGATAGTTGGGACATATGGTTACATGTCTCCAGAGTATGCAATGGAAGGAGTTTTTTCGACAAAGTCCGATGTGTACAGCTTTGGAGTCCTGCTCCTCGAGATTATTAGTGGTGAAAAATGCAATAGCATGTACTGTGAAGACAGACCACTTAATCTAGTTGGACATGCATGGGAGCTATGGAAAGAAGGTGTAGTTCTTCAGTTGGTGGATCCATTACTAAATGATACATTTTCTGAAGATGAGGTGCTAAGATGTGTTCATGCTGGTTTATTATGCGTAGAAGAAAATGCAGATGATCGCCCCACCATATCCAATGTTATAGCAATGTTAACTAACAAAATTAAAGTCGATGTTTTGCCTAAGAAACCAGCATACTATGGTAGAACAAGGGTTTTTGATGAAGAAACGTATGGCGAAGAAGTTGGTGTGGATTCCACACATGAAAACTCTGATTCACATGTACAATCATTATTAAAATGCAGGGATGAAATTATTAAATTTACTGAATAA	2427	0.3749	MVYTEKGKPQVLLFFTYLSLWCITISTYVKAENTDSMKLGDILNASATSKLCSKQGRYCMHFNQKPDPENLTYLSIFGKGKDDWLVWISNRNQPVDINSATLSLNYSGVLKIESKIGKPIILYASPPPFNNSSYIVATLLDTGNFVLKDIQKNLVLWQSFDHPTDSLLPGMKLGVNHKTGENWSLVSSISDTILSPGPFRLEWEATRKELVIKRREKVYWTSGKLMKNNRFMHITGKDFVIKVVSDEYFTYTTLNKNGLTKWTLLQTGQLINREGGESGDIARADMCYGYNTNGGCQKWGEAGIPTCRNPGDKFDNKPVYGNDNIVNNIENASYGISDCQEMCWSNCSCFGFKYLYENGTGCVFLESTEGLNVASSGDDYFYILIKNADHKVFDKWIWICAGMGTLLLIIGLSILLRALMKRKQVLREEERIRMQIEIQDLEASRRYCNGDDLEGDLSNGDDLKVFSYSSIIVATSGFSSENKLGQGGFGPVFKGILPSGQEVAVKKLSKTSGQGMTEFRNELTLICKLQHTNLVQLIGHCIHEQERILIYEYMPNKSLDFFLFDSTRRKLLNWNKRFNIMDGIAQGLLYLHKYSRHKIIHRDLKASNILLDDNMNPKISDFGVARMFTKQETEANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIISGEKCNSMYCEDRPLNLVGHAWELWKEGVVLQLVDPLLNDTFSEDEVLRCVHAGLLCVEENADDRPTISNVIAMLTNKIKVDVLPKKPAYYGRTRVFDEETYGEEVGVDSTHENSDSHVQSLLKCRDEIIKFTE*	809

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1501	808	SUPERFAMILY	Protein kinase-like (PK-like)	462	766	IPR011009	-
	Mtr8g1501	808	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	12	794	-	-
	Mtr8g1501	808	PIRSF	SRK	7	281	IPR024171	GO:0004674
	Mtr8g1501	808	PIRSF	SRK	281	798	IPR024171	GO:0004674
	Mtr8g1501	808	Pfam	PAN-like domain	326	364	IPR003609	-
	Mtr8g1501	808	PANTHER	CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN	12	794	-	-
	Mtr8g1501	808	ProSiteProfiles	Protein kinase domain profile.	478	753	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr8g1501	808	Pfam	D-mannose binding lectin	86	187	IPR001480	-
	Mtr8g1501	808	Pfam	Protein tyrosine and serine/threonine kinase	481	686	IPR001245	GO:0004672\|GO:0006468
	Mtr8g1501	808	Gene3D	-	28	161	IPR036426	-
	Mtr8g1501	808	ProSiteProfiles	Bulb-type lectin domain profile.	34	160	IPR001480	-
	Mtr8g1501	808	CDD	STKc_IRAK	484	751	-	-
	Mtr8g1501	808	ProSiteProfiles	PAN/Apple domain profile.	307	388	IPR003609	-
	Mtr8g1501	808	SUPERFAMILY	alpha-D-mannose-specific plant lectins	85	188	IPR036426	-
	Mtr8g1501	808	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	599	611	IPR008271	GO:0004672\|GO:0006468
	Mtr8g1501	808	SMART	blect_4	34	163	IPR001480	-
	Mtr8g1501	808	Gene3D	Phosphorylase Kinase; domain 1	447	553	-	-
	Mtr8g1501	808	Gene3D	Transferase(Phosphotransferase) domain 1	554	760	-	-
	Mtr8g1501	808	SMART	serkin_6	478	749	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1501	Mtr-Chr8	19761014	19764487	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g1501	456	768	Receptor kinase-like Gene Family	AT3G45860	57.460	1.94e-121	379

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mtr8g1501		PK_Tyr_Ser-Thr	4.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1501	-		-	vra:106778432	912.138