Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1499 ATGGTACTTTGTAGTGCACAAAGGAAAACTCAATTTTTGCTACTTTTCACATACTTGTGCTTGTGGTGTACTGATAATACTTCTCTCAATGCCAAAGCAGAAAATAATGATAGTTTGAAGCCAGGAGATAAGCTGAATGCCACATCCAAGCTATGTTCTAAACAAGGTAACTTTGTGTTGAAAGATACTCAGAAGAACACTGTGTTGTGGCAAAGTTTTGATCATCCAACCGATAGTTTGCTCCCTGGGATGAAATTAGGTTTGAATCACAAAACTGGTGAAAATTGGTCACTGGTTTCATGGATTGCTAATTCAAAACTATTACCAGCTTCTGGTCCATTCAGGCTTGATTGGGAACCCATAGGAAAGGAATTGGTCATTAAGCATAGAGAAAAAGTTTACTGGAAAAGTGGTAAGTTGATCAGACATAATAAATTTGAGCATATAGCTGAAGATAAAGAAGTTCAGTACACATCTGTGTCGAATGAGAGTGAAGATTCCATCTCATTTACACTGTCAACTGATGAAGACTTTACAATATGGGCTCTATTGGGAAATGGGCAGTTGATAAACAGGAATAGGAAAGGAGATACTTTAGCAAGGGCTGATGTGTGTTATGGCTACAACACCTATAAAGGGTGCCAAAAGTATGAGGACAAGCCTGCTTGCAGGAATTTTGGCGATGTATTTACAAGCAAAATAGGTTATCCCAATAAGGCAATGTTAAATGTTATAGGAAATGCTAGCTACAGCATAAGTGATTGTCAAGCTATGTGTTGGAGAAACTGCAGGTGCTTTGGATTCAAAAATTATCATACCAATGGAACTGGTTGTATGTTCTTTCTATCATCAGAGGGTCATAATATTGCAGCTGGTGGTCAAGAATTTTACCTTTTGCAGGAGAACATGCAAGCAGGTAAACATAATCGGTTGTGGATATGGATAAGCGTTGCAATAGCTACTGCTCTTCTCATAATTAGTATTTCCATTCTGTATAGAGCCAGAATGAAACGAAAGTATATGCTTGGAGAGAGTGATAGAAACACAATGGGGACTGAGATACAACATCTTGAGGATTCCAAGGCATCATCTAGTGGCAATGATCTAGAAGTTGATTTAAGCAAAGGAGATGACTTGAAAGTATTTAGCTATTCATCAATAAAAGTAGCTACTAATGACTTTTCATCTGAAAACAAGTTAGGACAGGGTGGCTTTGGATCGGTTTTTAAGGGAATTCTACCTTCTGGGCAAGAAGTAGCTGTGAAAAGACTTTCAAAATCTTCTGGACAAGGAATTGTTGAATTTAAAAATGAATTAAATCTCATATGTAAGCTCCAGCATACAAATCTGGTTCAGCTAATAGGTCACTGCATTCATGAACAAGAGAGAATATTAATCTATGAGTATCTTCCAAATAAAAGTTTGGACTTCTTTTTATTTGATTCTACTAGGAAAAAGCTGCTAGATTGGAATAAGCGCTTTAGCATAATCGAAGGAATCGCTCAAGGATTACTATATCTTCACAAGTACTCAAGACTCAGAATTATACATAGAGATTTGAAGCCTAGTAACATACTCCTTGATGAAAGCATGAACCCCAAAATATCTGATTTCGGTGTAGCAAGAATGTTTATGAAACAGGAATCTGAGGCAAATACCGACAGAATTGTTGGGACATATGGTTACATGTCTCCTGAGTATGCGATGGAAGGAATTTTTTCTACGAAGTCTGATGTGTATAGCTTTGGGGTGTTACTCCTTGAAATTATTAGCGGTAGAAAAAATAATAGCTTTTATTGTGAAGACAACCCACTAAATCTAGTAGGTCATGTTTGGGAGCTATGGAAAGAAGGTGAAGTTCTTCGGTTGGTCGATTCAGCTCTAAATGATTTTTTTTCTCAGGAAGAGGTGCTAAGATGTGTTCATGTTGGTTTATTGTGCGTACAAGAACATGCCGATGATCGCCCCAACATGTCGAATGTTATATCAATGTTAACAAATAAAAGTAGAGTGACTGTTTTTCCTAAGAAGCCGGCATACTATGGTAGAACAACCTTCGAGGAAGAAACGTGTTTTGAAGAATTTACTGGGGATTTTACATATAGTAATTCTTGTTCCCATTCACAATTAATACAGATAGACGTATGA 2148 0.371 MVLCSAQRKTQFLLLFTYLCLWCTDNTSLNAKAENNDSLKPGDKLNATSKLCSKQGNFVLKDTQKNTVLWQSFDHPTDSLLPGMKLGLNHKTGENWSLVSWIANSKLLPASGPFRLDWEPIGKELVIKHREKVYWKSGKLIRHNKFEHIAEDKEVQYTSVSNESEDSISFTLSTDEDFTIWALLGNGQLINRNRKGDTLARADVCYGYNTYKGCQKYEDKPACRNFGDVFTSKIGYPNKAMLNVIGNASYSISDCQAMCWRNCRCFGFKNYHTNGTGCMFFLSSEGHNIAAGGQEFYLLQENMQAGKHNRLWIWISVAIATALLIISISILYRARMKRKYMLGESDRNTMGTEIQHLEDSKASSSGNDLEVDLSKGDDLKVFSYSSIKVATNDFSSENKLGQGGFGSVFKGILPSGQEVAVKRLSKSSGQGIVEFKNELNLICKLQHTNLVQLIGHCIHEQERILIYEYLPNKSLDFFLFDSTRKKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKPSNILLDESMNPKISDFGVARMFMKQESEANTDRIVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIISGRKNNSFYCEDNPLNLVGHVWELWKEGEVLRLVDSALNDFFSQEEVLRCVHVGLLCVQEHADDRPNMSNVISMLTNKSRVTVFPKKPAYYGRTTFEEETCFEEFTGDFTYSNSCSHSQLIQIDV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1499 715 SUPERFAMILY Protein kinase-like (PK-like) 378 684 IPR011009 -
Mtr8g1499 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Mtr8g1499 715 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 102 IPR036426 -
Mtr8g1499 715 ProSiteProfiles Protein kinase domain profile. 394 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1499 715 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 52 709 - -
Mtr8g1499 715 Pfam D-mannose binding lectin 48 101 IPR001480 -
Mtr8g1499 715 Pfam Protein tyrosine and serine/threonine kinase 397 665 IPR001245 GO:0004672|GO:0006468
Mtr8g1499 715 Gene3D Phosphorylase Kinase; domain 1 355 469 - -
Mtr8g1499 715 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Mtr8g1499 715 CDD STKc_IRAK 400 667 - -
Mtr8g1499 715 PIRSF SRK 15 205 IPR024171 GO:0004674
Mtr8g1499 715 PIRSF SRK 201 713 IPR024171 GO:0004674
Mtr8g1499 715 Gene3D Transferase(Phosphotransferase) domain 1 470 676 - -
Mtr8g1499 715 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 52 709 - -
Mtr8g1499 715 SMART serkin_6 394 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1499 Mtr-Chr8 19676103 19683670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1499 372 690 Receptor kinase-like Gene Family AT3G45860 57.632 3.16e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1499 PK_Tyr_Ser-Thr 7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1499 - - gmx:100816869 766.918