LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1496	ATGGTTTGCAGTGAAAAAGGGATACCTCAACTGTTGCTTCTCTTCACACACTTCAGCTTGTTTTGGTGGATTACTAGTACTTCTATCTATGTCAAAGCAGAAAATATTGATAGTATGAAGCCAGGAGATAAACTGAATGCCACATCCGATTTGTGTTCTAAACAAGGTAGATATTGCATGAATTTTAACCAAACTACGCAATCTGAAAATCTCACTTATCTCAGCATAGTTGCCAAAGGTACTACTTGGGTGGTGTGGATTGCTAACAGAAACCAACTTGTTGACAAAAATTCAGCTGTTCTATCACTAGACTACTCTGGTGTGCTCAAAATAGAATCCAAAATCGGTGAACCAATAATCCTGTATTCTTCACCTCAACCTTTAAACAATAGTACTATTGTTGCCACCTTGTTAGATAAAGGTGACTTTGTGTTGAAAGATATTGAGAAGAACATTGTTTTGTGGCAAAGTTTTGATCATCCAACTGATAGTTGGCTTCCTGAGATGAAACTAGGTGTGAATCGTAAAACTGGTGAAAACTGGTCACTGGTTTCATACATTAGTGGTTCAATCCCAGCTTCTGGTCCATTCAGGCTTGAGTGGGAACCCACAATAAAAGAATTGGTCATCAAGCATAGAGAAAAAGTATATTGGACAAGTGGAAAACTGATGAAAAACAATAGATTTGAGAATATACGTGGAGAAGAATTTGAGGTCAAAGATTTTGAGGTCACATATAAAACTCCAAATGAAGAACTTACTATATGGACTCTATTGGAAACTGGGCAACTGATAAACAGAGGAGGAGTTGACATAGCAAGAGCTGATATATGTTATGGGTATAACACTAATGGAGGGTGCCAAAAGTGGCGTGATGTGGAGATACCTGCTTGCAGGAATCCTGGTGATATGTTTGATAGCAAGTTAGGATTCAGTAATAAAGATATGTTATACAATATAGAAAATGCTAGTTATGGCATAAGTGATTGCCAAGATATGTGCTGGAGTAACTGCAGCTGCTTTGGATTCAAACCTTTTTATGATAATCGAACTGGTTGTGTAATCTTGGTATCAAGTAATGGTTTTAACGCTGCAGGCATTGGTTTTGACTCATTTTACATTCTGGATAAGAACACTGGTCACAAAGTATCGAACAAGTGGCTATTGATTTGCACTGGATTGGGGACTCTTCTGCTATTTATGGGCCTTTCCATTCTGCTCCGAGCTTTAATGAGACGAAAACATGTGCTTCGAGAGAATGAACGAATAAGAATGCAGATTGAGATTCAAGATCTTGAAGGTTCTAGGCGAGACTCTGATAGCGATGATCTAGAAGGCAATTTCAGCAGTGGAGATGACTTAAAAGTGTTTAGCTATTCATCAATAATTGTGGCCACCAATGGCTTTTCTTCTGAAAACAAGTTAGGACAAGGTGGCTTTGAACCTGTTTTTAAGGGAATTCTACCTTCAGGGCAAGAAGTAGCTGTGAAGAAACTTTCAAAAACTTCTGGACAAGGAATGACTGAGTTTAGAAATGAATTAACACTCATTAGTAAGCTTCAGCATACGAATCTTGTTCGGCTAATCGGACATTGCATTCATGAACATGAGCGTATATTGATCTATGAGTATATGCCCAACAAAAGCTTGGACTTCTTTTTATTTGATTCCACCAGAAGAAAGTTGCTAGATTGGAACAAACGTTTTAGCATAATAGAAGGAATTGCTCAAGGATTACTTTACCTTCACAAATACTCAAGACTCCGAATTATCCACAGAGATTTGAAGGCTAGTAATATTCTCCTTGATGAAAATATGAACCCAAAAATTTCTGATTTTGGTGTGGCAAGAATGTTCACAAGACAAGAAACCAAAGCAAATACCAATAGAATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCGATGGAAGGAGTATTTTCTACGAAGTCTGATGTGTACAGCTTTGGAGTGCTGCTCCTTGAAATTATCAATGGTGAAAAAAACAATAGTTTCTACTGTGAAGACAGACCACTTAACCTAGTAGGACATGCATGGGAGCTATGGAAAGAAGGTGTGGTTCTTGAGTTGGTGGATCCATTACTAAATGAGTCATTTTCTGAGGATGAGGTGCTAAGATGTGTTCATGCTGGTTTATTATGCGTAGAAGAAAATGCAGATGATCGCCCCACCATGTCCAATGTTATAGCAATGTTAACTAACAAAATTAAAGTCGATGTTTTGCCTAAGAAACCGGCATACTATGGTAGAACAAGAGTTTTTGAGGAAGAAACATATGGCGAAGATGTTGGTGTGGATTCCACATATGAAAACTCTCATTCACATGAGCAAAGTATAGATAGATCCAGTGAAGAAAATACAAAATTTATCGATTAA	2400	0.3775	MVCSEKGIPQLLLLFTHFSLFWWITSTSIYVKAENIDSMKPGDKLNATSDLCSKQGRYCMNFNQTTQSENLTYLSIVAKGTTWVVWIANRNQLVDKNSAVLSLDYSGVLKIESKIGEPIILYSSPQPLNNSTIVATLLDKGDFVLKDIEKNIVLWQSFDHPTDSWLPEMKLGVNRKTGENWSLVSYISGSIPASGPFRLEWEPTIKELVIKHREKVYWTSGKLMKNNRFENIRGEEFEVKDFEVTYKTPNEELTIWTLLETGQLINRGGVDIARADICYGYNTNGGCQKWRDVEIPACRNPGDMFDSKLGFSNKDMLYNIENASYGISDCQDMCWSNCSCFGFKPFYDNRTGCVILVSSNGFNAAGIGFDSFYILDKNTGHKVSNKWLLICTGLGTLLLFMGLSILLRALMRRKHVLRENERIRMQIEIQDLEGSRRDSDSDDLEGNFSSGDDLKVFSYSSIIVATNGFSSENKLGQGGFEPVFKGILPSGQEVAVKKLSKTSGQGMTEFRNELTLISKLQHTNLVRLIGHCIHEHERILIYEYMPNKSLDFFLFDSTRRKLLDWNKRFSIIEGIAQGLLYLHKYSRLRIIHRDLKASNILLDENMNPKISDFGVARMFTRQETKANTNRIVGTYGYMSPEYAMEGVFSTKSDVYSFGVLLLEIINGEKNNSFYCEDRPLNLVGHAWELWKEGVVLELVDPLLNESFSEDEVLRCVHAGLLCVEENADDRPTMSNVIAMLTNKIKVDVLPKKPAYYGRTRVFEEETYGEDVGVDSTYENSHSHEQSIDRSSEENTKFID*	800

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1496	799	Gene3D	Transferase(Phosphotransferase) domain 1	545	751	-	-
	Mtr8g1496	799	MobiDBLite	consensus disorder prediction	773	799	-	-
	Mtr8g1496	799	Pfam	D-mannose binding lectin	84	185	IPR001480	-
	Mtr8g1496	799	SUPERFAMILY	Protein kinase-like (PK-like)	453	759	IPR011009	-
	Mtr8g1496	799	SMART	serkin_6	469	740	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr8g1496	799	SMART	blect_4	42	161	IPR001480	-
	Mtr8g1496	799	SUPERFAMILY	alpha-D-mannose-specific plant lectins	81	182	IPR036426	-
	Mtr8g1496	799	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	15	785	-	-
	Mtr8g1496	799	Pfam	Protein tyrosine and serine/threonine kinase	472	738	IPR001245	GO:0004672\|GO:0006468
	Mtr8g1496	799	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	590	602	IPR008271	GO:0004672\|GO:0006468
	Mtr8g1496	799	Gene3D	Phosphorylase Kinase; domain 1	434	544	-	-
	Mtr8g1496	799	ProSiteProfiles	Protein kinase domain profile.	469	733	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr8g1496	799	CDD	STKc_IRAK	475	742	-	-
	Mtr8g1496	799	Gene3D	-	30	158	IPR036426	-
	Mtr8g1496	799	MobiDBLite	consensus disorder prediction	781	799	-	-
	Mtr8g1496	799	PANTHER	CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN	15	785	-	-
	Mtr8g1496	799	ProSiteProfiles	Bulb-type lectin domain profile.	36	158	IPR001480	-
	Mtr8g1496	799	PIRSF	SRK	8	271	IPR024171	GO:0004674
	Mtr8g1496	799	PIRSF	SRK	273	793	IPR024171	GO:0004674

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1496	Mtr-Chr8	19632503	19637138	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g1496	457	791	Receptor kinase-like Gene Family	AT4G11530	56.250	2.08e-124	387

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Mtr8g1496		PK_Tyr_Ser-Thr	3.2e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1496	-		-	gmx:100816869	924.465