Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1491 ATGTCATCGGAGGGAAGAAATGACGCCATTGATGGGTCCTTGGAATATGAAGATGATGAAATAATAGATTCTCTGACCACTGTACCAGAGCCACAACATGGACCTTTACCTCAAGCCAATCACATTGATGACGGTGTTCTTTATGAAGGAAAGTCGGAAGATAATCCATTAGGTGTTTATAAAAGAGAGTTTGTTTGTCATCGTGCTGGTACTATTAGCGCAGACAAAGATAATGAAGTGGAAGGTAAAAGGAAACGGAAGTCGTCAAGATGTAGTTGTGGTGCTAAATTGTTGGTGAATATAACAACAATTAACTCTGAGAAAAAATGGGTGGTGAAATATTTTAATAATAATCATAACCATGAGTTATTATATGATAAAGACGTTAAATTTCTTCCTGCTTATCGAAGTATTCCAACTATTGATCAAGATCGTATTCTTTTGTTGTCAAAAGCTGGTTGTTCTGTTAGTTTGATAATTAGAGTGCTTGAGTTAGAGAAAAACGTAGATGCAGGAAATCTTCCATTTTTGGATAAAGACATTAGAAATTTCATTGAATCTCAAAGTGGTATTGGTAAAGAATTTGATGCTTCAAATGTTCTCAAATTATGTAAAAGTCTTAAAGATACAGATAATGCATTTGAGTATGAATTTCCAATCGATGAAAATAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAGTTCGAGCATATGAAGCCTTTGGAGATGTGATTGTTTTTGATACCACTTATCGAATAAATCGTTACGACATGCCGCTTGGAATTTTGGTTGGGGTCGATAATCATGGCAATTCCATTTTCTTTGGTTGTGTTCTATTGAAAAATGAGAAGATTCCTTCTTTTACATGGGCTATAAAGACTTTTCTTAGTTTTGTCAAAGGAAAATATCCACAAACAATTCTTACAGATCAAGATCTTGCAATGAAAGAAGCTATTGCAATGGAATTACCAAACACAAAACATGCATTTTGCATATGGCATATCCTGGCAAAGTTACCAACTTGGTTTTCTCTTCCATTAGGGTCGAGATACGATGATTTTAAAGATGAGTTTTATCGATTATACCATTTAGAATGTGAAGATGATTTTGAGAGGGAATGGAAATTGATGGTTGAACGGTTTTGTCTTAGCAAGGATAACCATATTAACTTGCTCTATTCGCTTCGTCAATTTTGGGCACTAGCTTATTTGAAGGACTTCTTTTTTGCTGGAATGACTACAACTGGACGTTCAGAATCTATAAATTCATATATAAAAAGATTCTTGGGAGCCAATACAAGTCTGACTGATATCATAAATCAAGTTGGGGTTGCTGTTAACATTAGAAATCAAGCTGGAGAAGAAGCAAGAATGCGTCAAAAGTACCACAATCCTCGTATTAGAACGTGTTTTCCTATTTTGGAACATGCTGCATCTATTCTTACACCTTATTCCTTTAAGTTGATTCAACATGAGATTGAGTTGTCTACAAAATATGCGGCAACTGAAACTAATAATAGTGTATTTATTGTGCGACATCATACCAAAAGTGACGGAGGCCGCTTTGTAACTTGA 1581 0.3491 MSSEGRNDAIDGSLEYEDDEIIDSLTTVPEPQHGPLPQANHIDDGVLYEGKSEDNPLGVYKREFVCHRAGTISADKDNEVEGKRKRKSSRCSCGAKLLVNITTINSEKKWVVKYFNNNHNHELLYDKDVKFLPAYRSIPTIDQDRILLLSKAGCSVSLIIRVLELEKNVDAGNLPFLDKDIRNFIESQSGIGKEFDASNVLKLCKSLKDTDNAFEYEFPIDENNKLEHIIWAFGDSVRAYEAFGDVIVFDTTYRINRYDMPLGILVGVDNHGNSIFFGCVLLKNEKIPSFTWAIKTFLSFVKGKYPQTILTDQDLAMKEAIAMELPNTKHAFCIWHILAKLPTWFSLPLGSRYDDFKDEFYRLYHLECEDDFEREWKLMVERFCLSKDNHINLLYSLRQFWALAYLKDFFFAGMTTTGRSESINSYIKRFLGANTSLTDIINQVGVAVNIRNQAGEEARMRQKYHNPRIRTCFPILEHAASILTPYSFKLIQHEIELSTKYAATETNNSVFIVRHHTKSDGGRFVT* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1491 526 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 58 523 - -
Mtr8g1491 526 Pfam FAR1 DNA-binding domain 58 124 IPR004330 -
Mtr8g1491 526 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 523 IPR031052 GO:0006355
Mtr8g1491 526 Pfam MULE transposase domain 246 339 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1491 Mtr-Chr8 19498801 19500662 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr8g1491 MULE 1.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1491 - - ccaj:109802755 679.478