Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1474 ATGAACTTGATAAAATATTTAGTTTCAAATTTCTTTGGTCCAAAAATGTGGATGGTCTTTCTTCTTATTTGCGGTTTGGTTGAGGGAACTCAATCTGCCACAATGACATCTCATCAACTTCAAATGGAAGCAAATGCTATATTAAATAGTGGATGGTGGAACACTTCTTATGCAGACTTCAATATCTCTGATCGTTGTCATGGGCATGGTATATTTTGCAACGATGCTGGAAGCATAATAGCAATTAAGATAGACTCTGATGATTCTACATATGCTGCGTGGGAGTATGATTATAAAACACGCAACTTGTCTACTCTCAACTTGGCTTGTTTCAAAAATCTAGAAAGCCTTGTTATAAGAAAAATTGGACTAGAAGGGACTATCCCAAAAGAAATTGGTCATCTCTCTAAACTCACTCATCTTGACATGTCTTACAATAATCTTCAAGGCCAGGTACCTCATTCACTAGGAAACCTCTCCAAACTCACTCATCTTGATTTGTCTGCCAATATTCTTAAAGGTCAGGTACCTCATTCACTAGGAAACCTCTCCAAACTCACTCATCTTGATTTGTCTGACAATATTCTTTCAGGTGTAGTACCTCATTCACTAGGAAACCTCTCCAAACTCACTCATCTTGATTTGTCTGACAATCTTCTTTCAGGTGTAGTACCTCATTCACTAGGAAACCTCTCCAAACTCACTCATCTTGATTTGTCTGACAATCTTCTTTCAGGTGTAGTACCTCCTTCACTAGGAAATCTCTCCAAACTCACTCATCTTGATTTGTCTGTCAATCTTCTTAAAGGTCAGGTACCTCATTCACTAGGAAACCTCTCCAAACTCACTCATCTTGATTTTTCCTATAATTCTCTCGAAGGTGAGATACCTAATTCACTTGGCAACCATAGACAATTAAAATACTTAGACATCTCTAACAACAACCTTAATGGTTCCATCCCTCATGAGTTGGGATTCATTAAATATCTTGGTTCATTAAATCTATCTACAAATAGAATCTCAGGTGATATTCCCCCTTCCTTGGGAAATCTCGTAAAACTCACCCATCTTGTTATTTATGGCAATTCTCTTGTAGGTAAGATACCTCCTTCAATAGGAAATCTTAGATCTTTAGAGTCCCTAGAGATTTCTGACAATTACATTCAAGGTTCCATCCCTCCCAGGTTGGGGTTGCTAAAAAACCTCACTACATTACGTCTATCTCACAATAGAATCAAAGGTGAGATACCTCCTTCACTAGGAAATCTGAAACAATTAGAGGAGCTAGACATCTCTAACAACAACATTCAAGGTTTCCTTCCTTTTGAGTTGGGGTTACTGAAAAATCTCACTACATTAGATCTGTCTCACAATAGACTCAATGGAAACCTGCCTATTTCTCTTAAAAATCTCACACAATTAATATACCTTAACTGCTCATATAATTTTTTCACTGGTTTCCTTCCATATAACTTTGATCAATCAACCAAATTGAAAGTTTTGTTGTTAAGTAGAAATTCCATTGGTGGGATCTTTCCATTTTCATTAAAAACCCTTGACATTTCCCACAATTTACTCATCGGTACGCTTCCTTCCAATTTGTTTCCATTTATTGATTATGTAACTTCCATGGACCTCAGTCACAACCTCATTAGTGGTGAAATACCTTCTGAGCTTGGATATTTTCAACAACTTACTTTAAGAAATAATAATCTCACTGGAACAATTCCCCAATCTCTCTGCAATGTCATTTATGTGGACATTTCATACAATTGTTTGAAGGGTCCCATTCCAATTTGTCTTCAGACAACGAAGATGGAAAATTCTGATATATGTTCATTTAACCAGTTCCAACCTTGGTCACCACACAAGAAAAATAATAAATTAAAGCACATTGTTGTCATTGTTATTCCGATGCTTATTATTCTAGTCATAGTCTTCTTACTTCTCATATGTTTTAATCTTCATCATAATTCTTCTAAGAAGTTGCATGGAAACTCAACAAAAATAAAGAATGGAGATATGTTTTGTATATGGAATTATGATGGAATGATAGCATATGATGACATAATCAAAGCGACAGAAGACTTTGACATGAGATATTGTATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGCAAGGTTGTTGCCTTAAAGAAACTTCACGGCTATGAAGCAGAGGTTCCATCTTTTGATGAGAGTTTCAGAAATGAAGTGAGAATTTTAACAGAAATAAAGCACAAACATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATCTATCAATACATGGATAGAGGAAGCTTATTCTCTGTCTTGTATGATGATGTAGAAGCCATGGAATTCAAGTGGAGAAAAAGAGTTAACACTATTAAAGGAGTTGCATTTGCTCTTTCATATCTTCATCATGATTGCACTGCTCCAATAGTGCATCGAGATGTATCTACTAGCAATATCTTGCTAAACTCTGAGTGGCAGGCCAGTGTTTGTGACTTCGGCACAGCTCGACTCCTTCAATATGATTCATCCAATCGAACTATAGTTGCTGGAACTATTGGATATATAGCTCCGGAACTTGCCTATACTATGGCTGTGAATGAAAAGTGTGATGTATATAGTTTTGGTGTAGTGGCACTTGAAACTTTAGCTGGAAGGCACCCTGGGGATTTATTGTCATCACTTCAATCAACATCGACACAAAGTGTCAAACTATGTCAAGTATTAGACCAGCGTCTTCCACTTCCAAATAATGAAATGGTTATACGTAACATAATTCATTTTGCCGTTGTTGCCTTTGCATGCTTAAATGTCAATCCTCGTTCTCGACCAACAATGAAATGTGTGTCGCAAAGTTTTGTCACCGAGCTTCCACGATTAAGTATTCCTTTCAGTGAAATTTCAGTGCAGCAACTAATGAGTGAAGAACTCAAAGCATTGTTTTATATTGCGAACCCTTGA 2994 0.3667 MNLIKYLVSNFFGPKMWMVFLLICGLVEGTQSATMTSHQLQMEANAILNSGWWNTSYADFNISDRCHGHGIFCNDAGSIIAIKIDSDDSTYAAWEYDYKTRNLSTLNLACFKNLESLVIRKIGLEGTIPKEIGHLSKLTHLDMSYNNLQGQVPHSLGNLSKLTHLDLSANILKGQVPHSLGNLSKLTHLDLSDNILSGVVPHSLGNLSKLTHLDLSDNLLSGVVPHSLGNLSKLTHLDLSDNLLSGVVPPSLGNLSKLTHLDLSVNLLKGQVPHSLGNLSKLTHLDFSYNSLEGEIPNSLGNHRQLKYLDISNNNLNGSIPHELGFIKYLGSLNLSTNRISGDIPPSLGNLVKLTHLVIYGNSLVGKIPPSIGNLRSLESLEISDNYIQGSIPPRLGLLKNLTTLRLSHNRIKGEIPPSLGNLKQLEELDISNNNIQGFLPFELGLLKNLTTLDLSHNRLNGNLPISLKNLTQLIYLNCSYNFFTGFLPYNFDQSTKLKVLLLSRNSIGGIFPFSLKTLDISHNLLIGTLPSNLFPFIDYVTSMDLSHNLISGEIPSELGYFQQLTLRNNNLTGTIPQSLCNVIYVDISYNCLKGPIPICLQTTKMENSDICSFNQFQPWSPHKKNNKLKHIVVIVIPMLIILVIVFLLLICFNLHHNSSKKLHGNSTKIKNGDMFCIWNYDGMIAYDDIIKATEDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAEVPSFDESFRNEVRILTEIKHKHIVKLYGFCLHKRIMFLIYQYMDRGSLFSVLYDDVEAMEFKWRKRVNTIKGVAFALSYLHHDCTAPIVHRDVSTSNILLNSEWQASVCDFGTARLLQYDSSNRTIVAGTIGYIAPELAYTMAVNEKCDVYSFGVVALETLAGRHPGDLLSSLQSTSTQSVKLCQVLDQRLPLPNNEMVIRNIIHFAVVAFACLNVNPRSRPTMKCVSQSFVTELPRLSIPFSEISVQQLMSEELKALFYIANP* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1474 997 Gene3D Transferase(Phosphotransferase) domain 1 776 970 - -
Mtr8g1474 997 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 35 198 - -
Mtr8g1474 997 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 195 354 - -
Mtr8g1474 997 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 351 990 - -
Mtr8g1474 997 SMART LRR_typ_2 231 254 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 183 206 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 207 230 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 279 303 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 399 422 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 423 446 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 135 159 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 255 278 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 447 470 IPR003591 -
Mtr8g1474 997 SMART LRR_typ_2 351 375 IPR003591 -
Mtr8g1474 997 ProSiteProfiles Protein kinase domain profile. 697 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1474 997 Pfam Leucine rich repeat 213 268 IPR001611 GO:0005515
Mtr8g1474 997 Pfam Leucine rich repeat 113 170 IPR001611 GO:0005515
Mtr8g1474 997 Pfam Leucine rich repeat 401 460 IPR001611 GO:0005515
Mtr8g1474 997 ProSitePatterns Protein kinases ATP-binding region signature. 703 725 IPR017441 GO:0005524
Mtr8g1474 997 ProSitePatterns Tyrosine protein kinases specific active-site signature. 821 833 IPR008266 GO:0004672|GO:0006468
Mtr8g1474 997 SUPERFAMILY L domain-like 398 605 - -
Mtr8g1474 997 Pfam Protein kinase domain 703 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1474 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 35 198 - -
Mtr8g1474 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 351 990 - -
Mtr8g1474 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 195 354 - -
Mtr8g1474 997 ProSiteProfiles Leucine-rich repeat profile. 401 424 IPR001611 GO:0005515
Mtr8g1474 997 ProSiteProfiles Leucine-rich repeat profile. 449 472 IPR001611 GO:0005515
Mtr8g1474 997 SMART LRR_sd22_2 447 473 - -
Mtr8g1474 997 SMART LRR_sd22_2 399 431 - -
Mtr8g1474 997 SMART LRR_sd22_2 351 377 - -
Mtr8g1474 997 SMART LRR_sd22_2 231 257 - -
Mtr8g1474 997 SMART LRR_sd22_2 135 161 - -
Mtr8g1474 997 SMART LRR_sd22_2 183 209 - -
Mtr8g1474 997 SMART LRR_sd22_2 279 311 - -
Mtr8g1474 997 SUPERFAMILY Protein kinase-like (PK-like) 675 962 IPR011009 -
Mtr8g1474 997 SUPERFAMILY L domain-like 91 247 - -
Mtr8g1474 997 Gene3D Phosphorylase Kinase; domain 1 658 775 - -
Mtr8g1474 997 Gene3D Ribonuclease Inhibitor 248 347 IPR032675 -
Mtr8g1474 997 SUPERFAMILY L domain-like 210 441 - -
Mtr8g1474 997 Gene3D Ribonuclease Inhibitor 352 625 IPR032675 -
Mtr8g1474 997 PRINTS Leucine-rich repeat signature 210 223 - -
Mtr8g1474 997 PRINTS Leucine-rich repeat signature 447 460 - -
Mtr8g1474 997 Gene3D Ribonuclease Inhibitor 35 247 IPR032675 -
Mtr8g1474 997 Pfam Leucine Rich Repeat 281 301 IPR001611 GO:0005515
Mtr8g1474 997 Pfam Leucine Rich Repeat 185 207 IPR001611 GO:0005515
Mtr8g1474 997 Pfam Leucine Rich Repeat 305 324 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1474 Mtr-Chr8 18915887 18919298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1474 14 869 Receptor kinase-like Gene Family AT4G08850 36.286 1.19e-167 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr8g1474 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1474 - - mtr:MTR_8g047230 1946.78