Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1473 ATGAACTTGATAAAATATTTAGTTTCAAATTTCTTTGGTCCAAAAATGTGGATGGTCTTTCTTCTTATAATTTGTGGTTTGGTTGAGGGAACTCAATCTGCCACAATGACATCTCATCAACTTCAAATGGAAGCAAATGCTATATTAAATAGTGGATGGTGGAACACTTCTGATGCAAACTTCAATATCTCTGATCGTTGTCATGGGCATGGTATATTTTGCAACGATGCTGGAAGCATAATAGCAATTAAGATAGACTCTGATGATTCTACATACGCTGCCTGGGAGTATGATTTTAAAACACGCAACTTGTCTACTCTCAACTTGGCTTGTTTCAAAAATCTAGAAAGCCTTGTTCTAAGAAAAATTACACTAGAAGGGACTATCTCAAAAGAAATTGGTCATCTCTCTAAACTCACTCATCTTGATTTGTCTGCCAATTTTCTTGAAGGTCAGCTACCTCCTGAATTGTGGTTGCTAAAAAATCTCACTTTCTTAGATCTATTTAACAATAGATTCAAAGGTGAGATACCTTCTTCACTAGGAAATCTCTCCAAGCTCACTCATCTTAACATGTCTTACAATAATCTTGAAGGTCAGCTACCTCATTCACTAGGAAACCTCTCCAAACTCACTCATCTTGATTTGTCTGCCAATATTCTTAAAGGTCAGCTACCTCCTTCACTAGCAAATCTCTCCAAACTCACTCATCTTGATTTGTCTGCCAATTTTCTTAAAGGTCAGCTACCTTCTGAATTGTGGTTGCTAAAAAATCTCACTTTCTTAGATCTATCTTACAATAGATTCAAAGGTCAGATACCTTCTTCACTAGGAAATCTAAAACAATTAGAGAACCTAGACATCTCTGACAACTACATTGAAGGTCATATTCCTTTTGAGTTGGGCTTCCTCAAAAATCTTTCTACACTAGGTCTATCTAACAATATATTCAAAGGTGAGATACCTTCTTCATTGGGAAATCTCAAACAGTTACAACATCTAAACATCTCTCACAACCATGTTCAAGGTTTCATTCCTTTTGAGTTGGTGTTCCTGAAAAATATCATTACATTTGATCTATCTCACAATAGACTCACTGACCTTGATTTGTCTAGCAATTATCTTAAAGGTCCAGTAGGAAATCTCAACCAGTTACAACTACTAAACATCTCTCACAACAACATTCAAGGTTCCATTCCTCTTGAGTTGGGGTTCCTCAGAAATATCATCACATTAGATCTATCTCACAATAGACTCAATGGAAACTTGCCTAATTTTCTTACAAATCTTACACAATTAGATTACCTTGACATCTCATATAATTTACTCATAGGTACGCTTCCTTCCAAATTTTTTCCATTTAATGATAATTTATTTTTCATGGACCTCAGTCACAACCTCATTAGCGGTCAAATCCCTTCTCATATTCGAGGTTTTCACGAACTTAATTTAAGCAATAATAATCTCACTGGAACAATTCCCCAATCTCTCTGTAATGTCTATTATGTGGACATTTCATACAATTGTTTGGAGGGTCCCATTCCAAATTGTCTTCAGGTTTATACAAAGAATAAGGGAAATAATAATCTCAATGGAGCAATTCCCCAATCTCTTTGTAATCTCTCTGTAATGTCTTTTCACCAATTCCATCCTTGGCCAACACACAAGAAAAATAAAAAATTAAAGCACATTGTCATCATTGTTCTTCCGATCCTTATTGCTCTAATCCTAGTCTTCTCACTTCTCATATGCTTGTATCGTCATCATAATTCTACTAAGAAATCGCAAGGAAACTCAACAAAAACAAAGAATGGAGATATGTTTTGTATATGGAATTTTGATGGGAAGATAGCATATGATGACATCATCAAAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGCAAGGTTGTTGCCTTAAAGAAACTTCACCGCTATGAAGCAGAGGTTCCATCTTTTGATGATAGTTTCAGAAATGAAGTGAGAATATTATCAGAAATAAAGCACCGACATATTGTGAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATCTATCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTAAAAGTCGTGGAATTCAAGTGGAGGAAAAGGGTTAACACTATTAAAGGAGTTGCATTTGCTTTTTCATATCTTCATCATGATTGCACTGCTCCAATAGTGCATCGAGATGTATCTACTAGCAATATCTTGCTAAACTCTGAGTGGCAGGCCAGTGTTTGTGACTTCGGCATAGCTCGGCTCCTTCAATATGATTCATCCAATCGAACTATAGTTGCTGGAACTATTGGATATATAGCTCCAGAACTTGCCTATACTATGGCTGTTAATGAAAAGTGTGATGTATATAGTTTTGGTGTAGTGGCACTTGAAACTTTAGTTGGAAGGCACCCTGGGGATTTATTGTCATCACTTCAATCAACATCGACACAAAGTCTCAAACTATGTCAAGTATTAGACCACCGTCTTCCACTTCCAAATAATGACATAGTTATACGTGACATAATTCATGCTGCCGTGGTAGCATTTGCATGCTTAAATGTCAATCCTCGTTCTCGACCAACAATGAAATGTGTGTCGCAAAGTTTTGTCACCGAGCTTCCACGATTAAGTATTCCTTTCAGTGAAATTTCAGTGCAGCAACTAATGAGTGAAGAACTTAAAGCATTGTTTTGTATTGCGAACCCTTGA 2790 0.3634 MNLIKYLVSNFFGPKMWMVFLLIICGLVEGTQSATMTSHQLQMEANAILNSGWWNTSDANFNISDRCHGHGIFCNDAGSIIAIKIDSDDSTYAAWEYDFKTRNLSTLNLACFKNLESLVLRKITLEGTISKEIGHLSKLTHLDLSANFLEGQLPPELWLLKNLTFLDLFNNRFKGEIPSSLGNLSKLTHLNMSYNNLEGQLPHSLGNLSKLTHLDLSANILKGQLPPSLANLSKLTHLDLSANFLKGQLPSELWLLKNLTFLDLSYNRFKGQIPSSLGNLKQLENLDISDNYIEGHIPFELGFLKNLSTLGLSNNIFKGEIPSSLGNLKQLQHLNISHNHVQGFIPFELVFLKNIITFDLSHNRLTDLDLSSNYLKGPVGNLNQLQLLNISHNNIQGSIPLELGFLRNIITLDLSHNRLNGNLPNFLTNLTQLDYLDISYNLLIGTLPSKFFPFNDNLFFMDLSHNLISGQIPSHIRGFHELNLSNNNLTGTIPQSLCNVYYVDISYNCLEGPIPNCLQVYTKNKGNNNLNGAIPQSLCNLSVMSFHQFHPWPTHKKNKKLKHIVIIVLPILIALILVFSLLICLYRHHNSTKKSQGNSTKTKNGDMFCIWNFDGKIAYDDIIKATEDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHRYEAEVPSFDDSFRNEVRILSEIKHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDDVKVVEFKWRKRVNTIKGVAFAFSYLHHDCTAPIVHRDVSTSNILLNSEWQASVCDFGIARLLQYDSSNRTIVAGTIGYIAPELAYTMAVNEKCDVYSFGVVALETLVGRHPGDLLSSLQSTSTQSLKLCQVLDHRLPLPNNDIVIRDIIHAAVVAFACLNVNPRSRPTMKCVSQSFVTELPRLSIPFSEISVQQLMSEELKALFCIANP* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1473 929 SMART LRR_typ_2 304 328 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 352 375 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 136 160 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 256 280 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 382 406 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 430 454 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 184 208 IPR003591 -
Mtr8g1473 929 SMART LRR_typ_2 232 255 IPR003591 -
Mtr8g1473 929 SUPERFAMILY L domain-like 293 520 - -
Mtr8g1473 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 36 277 - -
Mtr8g1473 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 161 315 - -
Mtr8g1473 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 274 366 - -
Mtr8g1473 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 365 435 - -
Mtr8g1473 929 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 428 922 - -
Mtr8g1473 929 Pfam Protein kinase domain 635 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1473 929 Gene3D Ribonuclease Inhibitor 201 365 IPR032675 -
Mtr8g1473 929 Gene3D Ribonuclease Inhibitor 366 549 IPR032675 -
Mtr8g1473 929 SUPERFAMILY Protein kinase-like (PK-like) 608 894 IPR011009 -
Mtr8g1473 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 274 366 - -
Mtr8g1473 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 36 277 - -
Mtr8g1473 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 161 315 - -
Mtr8g1473 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 365 435 - -
Mtr8g1473 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 428 922 - -
Mtr8g1473 929 Pfam Leucine Rich Repeat 481 499 IPR001611 GO:0005515
Mtr8g1473 929 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515
Mtr8g1473 929 Pfam Leucine Rich Repeat 258 280 IPR001611 GO:0005515
Mtr8g1473 929 Pfam Leucine Rich Repeat 210 232 IPR001611 GO:0005515
Mtr8g1473 929 SMART LRR_sd22_2 160 186 - -
Mtr8g1473 929 SMART LRR_sd22_2 256 288 - -
Mtr8g1473 929 SMART LRR_sd22_2 208 234 - -
Mtr8g1473 929 SMART LRR_sd22_2 136 151 - -
Mtr8g1473 929 SMART LRR_sd22_2 352 372 - -
Mtr8g1473 929 SMART LRR_sd22_2 455 481 - -
Mtr8g1473 929 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Mtr8g1473 929 Gene3D Transferase(Phosphotransferase) domain 1 708 902 - -
Mtr8g1473 929 ProSitePatterns Tyrosine protein kinases specific active-site signature. 753 765 IPR008266 GO:0004672|GO:0006468
Mtr8g1473 929 ProSiteProfiles Protein kinase domain profile. 629 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1473 929 SUPERFAMILY L domain-like 109 366 - -
Mtr8g1473 929 Gene3D Ribonuclease Inhibitor 36 200 IPR032675 -
Mtr8g1473 929 Gene3D Phosphorylase Kinase; domain 1 588 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1473 Mtr-Chr8 18910922 18914205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1473 110 801 Receptor kinase-like Gene Family AT4G08850 36.954 2.27e-141 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr8g1473 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1473 - - mtr:MTR_8g047210 1699.49