Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1437 ATGCCTGATTTACCTAATGATATGAGTGACAACAGCTTATCTGAAGAAGCTCCCAAAACAGATCAAAGTTGTGCAAATGATCATACAGAAAATGATGATACTAAACAAGAGAACAATCAAGAAGCAATAGATGGTTTCACAAATCAAAACAATGCAAAGAAACCAACATCATCACCAAGGCCACAAAAATTAGAATCATTAATGAGAAATTTCTCTGAATTTTCCACAACTCCAAGACCAAGTCCAAGAATGATTTCAAGGAGTGGACCGAATTCACGTAGCGGTAGTCTAGAAAGCACAAGTGCACCAATATTTAAGCCTCATACAGGAGATGATGTGAGATGGGATGCAATCAACATGGTTTCAAGAGGTTCAAGTTCAAATCTTAACTTTGGTCATTTTCGGCTTGTGAAGCGTGTTGGTTACGGTGACATTGGAAGTGTGTATCTTGTTGAACTTAAAGGGACAGGAACATTCTATGCTATGAAATTAATGGATAAGGCTTCACTTGCTAGCAGAAATAAGCTTCTTAGAGCACATACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTGTATTCCTATTTTGAAAATGAGAAGTATTATTGTTTGGTCATGGAGTTTTGTAGTTGTGGTAGTTTGCATAACCTCCGAATGAAGCAACCCAACAAGCATTTCACTGAAAATGCTGCAAGGTTTTATTGTTCAGAGATTCTATTAGCAATGGAATACCTCCACATGTTAGGAATAGTATACAGAGACTTAAAACCAGAAAATGTCCTAGTCCGAGACAATGGCCACATAATGCTATCAGATTTCGACTTATCCCTCCGTTGTTCCGTTAGCCCCACCCTCGTCAAATCCTCCTCTGCACACATAACAACCACCACCACCACCACATCCATTGCAATCCTGGACGACGAACATGCAGTACAGGGCTGCATGCAACCATCAAATTTCTTCTTCCCAAGAATCCTCCCATACAAAAGAAACCGAAAATCAAAATCAGATTTCGGTCTCATGGTAGGTGGCCGTCTTCCAGAATTAATGGCAGAACCAACTAATGTCCGATCAATGTCATTCGTTGGAACACATGAGTATCTTGCTCCAGAAATCGTGCGTGGTGAAGGACACGGTAGTGCTGTTGATTGGTGGACTTTTGGCATATTTTTATACGAGCTTTTATACGGAACAACACCGTTTAAAGGTAATGGAAACCGAGCAACGCTTTTTAATGTTGTAGGGCAGCCTTTAAGGTTTCCTGACCATCCTTCCGCTAGTCCGGTAGCGAGGGATCTTATTAGAGGGTTGTTGGTTAAAGAGCCTCATAAGAGAATTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACATCCATTTTTCGAAGGTGTTAATTGGGCTTTGATTCGAAGTTCTACTCCTCCGATTATACCTGAAACGTTCGATTTTAGTCAGTATGTTAGTAAGGAAACTGTTGTGGCTGCTGCTGATAATAAGAAGATTGTTGATATTGTTAGTGATAAAAATAGTAAGATGCAGCATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1590 0.3956 MPDLPNDMSDNSLSEEAPKTDQSCANDHTENDDTKQENNQEAIDGFTNQNNAKKPTSSPRPQKLESLMRNFSEFSTTPRPSPRMISRSGPNSRSGSLESTSAPIFKPHTGDDVRWDAINMVSRGSSSNLNFGHFRLVKRVGYGDIGSVYLVELKGTGTFYAMKLMDKASLASRNKLLRAHTEREILGLLDHPFLPTLYSYFENEKYYCLVMEFCSCGSLHNLRMKQPNKHFTENAARFYCSEILLAMEYLHMLGIVYRDLKPENVLVRDNGHIMLSDFDLSLRCSVSPTLVKSSSAHITTTTTTTSIAILDDEHAVQGCMQPSNFFFPRILPYKRNRKSKSDFGLMVGGRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLYGTTPFKGNGNRATLFNVVGQPLRFPDHPSASPVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALIRSSTPPIIPETFDFSQYVSKETVVAAADNKKIVDIVSDKNSKMQHDSSYEDFEYF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1437 529 MobiDBLite consensus disorder prediction 40 103 - -
Mtr8g1437 529 Gene3D Transferase(Phosphotransferase) domain 1 218 287 - -
Mtr8g1437 529 MobiDBLite consensus disorder prediction 21 39 - -
Mtr8g1437 529 MobiDBLite consensus disorder prediction 1 105 - -
Mtr8g1437 529 CDD STKc_phototropin_like 133 484 - -
Mtr8g1437 529 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 22 529 - -
Mtr8g1437 529 Gene3D Phosphorylase Kinase; domain 1 133 217 - -
Mtr8g1437 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Mtr8g1437 529 SMART serkin_6 134 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1437 529 Pfam Protein kinase domain 135 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1437 529 Pfam Protein kinase domain 360 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1437 529 PANTHER FLIPPASE KINASE 1-RELATED 22 529 - -
Mtr8g1437 529 ProSiteProfiles Protein kinase domain profile. 134 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1437 529 Gene3D Transferase(Phosphotransferase) domain 1 342 484 - -
Mtr8g1437 529 SUPERFAMILY Protein kinase-like (PK-like) 131 494 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1437 Mtr-Chr8 17857997 17859909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1437 97 529 AGC Kinase Gene Family AT1G79250 69.383 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr8g1437 Pkinase 5.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1437 - - gmx:100802478 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1437 8 17857997 17859909 Mtr8g1437 8 17857997 17859909 ECH
Mtr2g2157 2 32162623 32165528 Mtr8g1437 8 17857997 17859909 PCT