Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1415 ATGGCTGCTGCTTCAAAGAAGAAGGTAAGTACTTCTGTTTCTCACATTCACGATGACATTGCTTTCTCCATTCTCTCTAAATTGCCTATTAAATCTCTCAAACGTTTTACCTGTGCTAAAAAATCATGGTCACTTTTATTCCAAAACCCTAATTTCATGAACATGTTCCGCACCAATTTCCTCATTTCCAAACACCATGACGAAGCTGAGATCCGTCTCCTCATATTGGAACGGTCAGGGTTTCACATTCAGCAATCTCTTTCCATTCTTTCTGGTGAAAGGTTTGAAATTAGGGCTAATTTAGATTGCCCACTTCCATTTCAACAAGACGCCAATGCCGATGCTCCTCCTGCTATTTTCATTTTGGGTTCTGCTAGTGTTAATGGCACTCTTTGTCTATATCAAAAGTTAACGACTGTGTTATGGAACCCTACAACCTCAGAATTCAAGATCATTCCTCCTAGCATTCAACCGGTGGAAAACAAGCTTCCTCCTCATGGGTTTGGTTATGACTGTGTTACGAATGATTTTAAGGTGATTCGGAAGCTTAGAGATCCCATAGAATTTGAAGGCAAGTTGTATGAACCTTTTTGGGAGATATATAGTCTCAAAAGTGATTCTTGGAGGAAACTTGATGGATTTGATGATATGCATGTTTCTTACACAGGTAGGTATATGGTGAACTTGAATGGATTTTGCCACTGGTTTACCGAATTACATGATAATGATATAGTGTCATTCAACTTTAGCAAAGAGACATTCATTGCAACTACCTTACCTTCTTCAGATGTAAAATATAGATCATACAACTTTCACTTGGTGGAGTTAAACGACTCTCTTTCTGTCATATTTAATTATGACAGGACGCCTGATTTTCATATATGGGTTTTGGGTGAAGTGGGTATCAAGCAATCATGGACCAAGCTGTTTGTTGTCGGGCCTTATAATTGTTCGATTGTCTGTCCTATCTCAGTAGGGAACAAGAACCGTATATTCTTCAGGGAAGAAGATCTTGAGCTAGGCTGGCTTGATTTAAGTACCCAAAGGGTTGAAAGAATTGAAGTTCAAGGCGATTCATTTTGTACGCACATGGCAATCTATAAGGAGAATCTTCTTCCTTTTCCAAGGAATGAATAA 1137 0.3879 MAAASKKKVSTSVSHIHDDIAFSILSKLPIKSLKRFTCAKKSWSLLFQNPNFMNMFRTNFLISKHHDEAEIRLLILERSGFHIQQSLSILSGERFEIRANLDCPLPFQQDANADAPPAIFILGSASVNGTLCLYQKLTTVLWNPTTSEFKIIPPSIQPVENKLPPHGFGYDCVTNDFKVIRKLRDPIEFEGKLYEPFWEIYSLKSDSWRKLDGFDDMHVSYTGRYMVNLNGFCHWFTELHDNDIVSFNFSKETFIATTLPSSDVKYRSYNFHLVELNDSLSVIFNYDRTPDFHIWVLGEVGIKQSWTKLFVVGPYNCSIVCPISVGNKNRIFFREEDLELGWLDLSTQRVERIEVQGDSFCTHMAIYKENLLPFPRNE* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1415 378 PANTHER OS09G0372900 PROTEIN-RELATED 13 365 - -
Mtr8g1415 378 SUPERFAMILY F-box domain 13 62 IPR036047 GO:0005515
Mtr8g1415 378 TIGRFAM F_box_assoc_1: F-box protein interaction domain 126 318 IPR017451 -
Mtr8g1415 378 Pfam F-box associated 227 335 IPR006527 -
Mtr8g1415 378 PANTHER CYCLIN-LIKE F-BOX, F-BOX PROTEIN INTERACTION DOMAIN 13 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1415 Mtr-Chr8 17599911 17601410 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1415 194 312 Carbohydrate Esterase AT1G25141 26.190 1.82e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1415 - - mtr:MTR_8g046310 779.245