Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1408 ATGGACTTGTTACAAAGTTCCACACTTTCCTACCTAGTAATAATTTTCACTTTCTCTATACTTCTCCTTATCAAATTTCTTACTCCAACAAACAAAACAAACCAAAAAAACCACTCTAAGCTTCCACCAGGTCCTTCACAACTTCCCATAATAGGAAACCTTCTAAAACTAGGCAACAAACCACATCATTCTTTGGCAAATCTTTCAAACATTCATGGTCCAATAATGACACTAAAGTTAGGCCAAGTAACAACCATAGTAATATCCTCAGCAGACATAGCAAAAGAAGTTCTACAAACACATGACACCTTACTATCAAACCGGACTGTCCCGGACGCACTCTCCGTTCTCAACCATGATCAATATAGTTTGTCATTTATGCGTGTTTCCCCACGTTGGCGCGACCTTAGAAAAATTTGCAATAACCAGTTGTTTGCAAACAAAACTCTCGATTCAAGCCAGGCGCTAAGGCGGAGGAAATTACAAGACCTCTTAGATGACATCAAAAAGTGTAGCGAAATTGAGGAAGCTGTCGATATTGGAAGAGTTGCTTTCATGACGACGATTAATTTGTTGTCGAATACTTTTTTCTCGGCAGATTTTGTGCATTCTGCTGAGGAAGCTGGAGAGTATAAGGAGATTGTTGTGAGTATATTGAAGGAAGTTGGAGCACCGAATTTGTCGGATTTTTTTCCTATGTTGAAGGTTTTTGATTTGCAAGGTATTAGAAGGCGTTCTGTTGTTTCTGTTAAGAAGGTTTTGAGTATATTTAGGAGTTTTGTTGGGGAAAGGTTGAAGATGAGGGAAGGTACTGGTTCTATTGGGAATGATGATGTTCTAGATGCTTTGCTCAATATTTCTTTGGATGATGGGAAGATTGAGATGGATAAAGATGAGATTGAACACTTATTGCTGAACATATTTGTTGCAGGAACAGACACAACAACATACACTCTAGAATGGGCAATGGCAGAGTTAATGCACAATCCAGAAATCATGTTAAAAGTACAAAAGGAACTTGAACAAGTTGTTGGCAAAGGTATTCCAATACAAGAAACAGACATAGCTAAGTTACCATACATGCAAGCAGTTATAAAAGAAACATTTCGTTTACATCCACCAGTTCCCTTGTTATTACCTCGCAAAGCAGAAATCGATGTTGAAATTGGTGAATACATTATTCCAAAAGATGCACAAGTGTTGGTTAATGCATGGGTGATTGGTAGAGACCCAAATAAATGGGATAATGCTAATGTTTTTATACCAGAAAGGTTTTTGGACAATGAAATTGATGTTAAAGGACATCATTTTGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGCTTGCCTTTGGCTATTAGAATGTTGCCTATGATGTTGGGATCTTTGATTAATTGCTTTGATTGGAAACTTGAAGATGGATTAAATATTGATGATTTGAACAAAGAAGATGAATATGGGATTACTTTGGAAAAATCTCAACCTGTGAGAATTGTTCCAATCAAATTGACTAAACAATAA 1530 0.3699 MDLLQSSTLSYLVIIFTFSILLLIKFLTPTNKTNQKNHSKLPPGPSQLPIIGNLLKLGNKPHHSLANLSNIHGPIMTLKLGQVTTIVISSADIAKEVLQTHDTLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNQLFANKTLDSSQALRRRKLQDLLDDIKKCSEIEEAVDIGRVAFMTTINLLSNTFFSADFVHSAEEAGEYKEIVVSILKEVGAPNLSDFFPMLKVFDLQGIRRRSVVSVKKVLSIFRSFVGERLKMREGTGSIGNDDVLDALLNISLDDGKIEMDKDEIEHLLLNIFVAGTDTTTYTLEWAMAELMHNPEIMLKVQKELEQVVGKGIPIQETDIAKLPYMQAVIKETFRLHPPVPLLLPRKAEIDVEIGEYIIPKDAQVLVNAWVIGRDPNKWDNANVFIPERFLDNEIDVKGHHFELIPFGSGRRICPGLPLAIRMLPMMLGSLINCFDWKLEDGLNIDDLNKEDEYGITLEKSQPVRIVPIKLTKQ* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1408 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 507 - -
Mtr8g1408 509 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 507 - -
Mtr8g1408 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Mtr8g1408 509 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 Pfam Cytochrome P450 42 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g1408 509 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1408 Mtr-Chr8 17552590 17555373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1408 1 505 Cytochrome P450 AT2G45550 43.333 1.49e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1408 - K23810 gmx:100805772 587.8