Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1398 ATGAGCGAACCCCACCATCCCGCTACCAACACTAACGAACCCGCCGCCGCCGTCTCCGACCATCCCAGCGCCGCTGCCATTGTTGTTGATCAAGATTGTGTCAATAAATTGGTGAACAACATTCATGAACAAAATGTGCAACGCGGACAAGGAAGTATTGCCAACAATTTACCTCACTTGGAAATGAATTTTGATTCTGAGGCGGCGGCTTATGATTTTTATAATGAGTACAGTAAAATAATTGGATTTGGTATTCGTCGAGAATATGGAAATAGAAGCAGAGTAGATGGATTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTGTACGAGGTGTTGACATAAGACGTCAACCAAAAGGGGAGCCTAGAGCAGAAATTAGAACGGGATGTTTGGCGCGTATGGTTATTTCACTCGATCGGAAGATAGAGAAATATAAAGTTGTTGACTTTATAGCTGAACATAACCACGAACTTCAACCTGAGCATGTTCATATGATTCGCTCTCATCGACGCATATCTGATACACAAGCATCACAAATTGTCTTGGGAGATGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATATCCAAGCAAGCTGGTGGAATAAAGACAGTTGGTTTTACCAAAAAAGACCTTACGAATTACCTTGAAACCAAAAGGAAGCAGTCACTAAAGTATGGTGAAGTGGGTGCATTGATGATGTATTTCAAAAAAGAAAGTGAAAATCCCTCGTTCTATTATGACTTGCAAATGGATGTTGAAGAGAAAATAACAAATATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTATTTTGGTGATGTTATCACTTTTGACACCACATACAAGACAAATAAGGGTTATCGGCCGCTGGGAGTATTTGTTGGACTAAATAATCACAGGCAAACAGTCATTTTTGGGGCAGCATTGTTATATGACGAAACAATCCCTTCTTTCAAGTGGTTATTTGAAACATTTCTCAAGGCAATAGGTGGTAAAAAGCCAAAAACCATGATGACGGATCAAGATGCCGCGATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGACAGAACGCTTTACGGCATGTGAACCACTTGTATCAAAAGAGTTCACGATTCGGTTTGGATTTTGAAGCATGCATAGATCTACATGAAGATGAGGGTGAATTTTTGAATGCTTGGAATTCTTTACTTGTTGAGCATAATATATTGGAAGGGTCGTGGTTGCATACAATTTTTCAATTGAAGGAGAAATGGGCATGGACATATGTCCGGAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATGTTGATTTGAAGAACCATTTGAAGTCTGATTTAAATTTGGTACAATTTTTTACACACTTTAAAAGAGCTGTTAATGGTAAACGAAACAAAGAGTCAGAAGCTGAATATGAGTCAAAAAATAAGCTTCCTAGATTGAAAATGAAGAAGGCTCGTATGCTCATACAAGCTGCAAACGTTTACACTCCAAGAATATTTGAGGAGTTCCAAGAGGAATATGAAGAATATCAAGACACTTGCATAAAAGATTTGAAAAAAGGTTTGTATGCTGTCACAAACTATGATAATCCAACGGAGAGGATAGTTATGGGAAATGCTATGGAACAAAAAGTTTCTTGTGATTGTCGTAAATTTGAGACACATGGCGTCTCATGCAGTCATGCTTTGAAAGTTTTAGATGTCATGAACATTAAGTTAATTCCTGAAACCTATATACTTAAGCGATGGAGAAGAAATGCAAGGTTGGGAAGTGATCAAGATTGGAAAGGGAGGCATGTTGAATTAGACATAAAAGCCCATTTCATGAAGCGGTACAATGAGTTATGTCCTCGAATGGTTAAGTTGACCAACAAAGCTTCAGAAACTCATGAAACATACACATTTTTGTCCAAAGTTTATGAAGAGTCCAGCAAAATAATTGATGATATGTTGGCCAAAAAGTATGTGGATGGAGAATCAGGTGGCATGGTTCATGTATCCATATCAATTGCAAATGATGAAATTGACAATGTGGACACCGTTTGCATGGCAAAAGGCATAGCTAATCGAGAATGTTCACGCAAGCAGAAAAAGCGATATAAATCTTGGATTGAGAAAAAAGATAAAAAGACAAAGATGTGCTCAAAGAGAAAGAGGTCTGGTGAAAATTTAGTGCAGTTGTTACCGCAAGAAACTACCGTTCAAGCGACACAATCAAGTCAAGTTGGCAATGGAACTCAACATCAAGCTACAATCCAAGAGTCATAA 2340 0.3803 MSEPHHPATNTNEPAAAVSDHPSAAAIVVDQDCVNKLVNNIHEQNVQRGQGSIANNLPHLEMNFDSEAAAYDFYNEYSKIIGFGIRREYGNRSRVDGFLTSRRFTCFKEGVRGVDIRRQPKGEPRAEIRTGCLARMVISLDRKIEKYKVVDFIAEHNHELQPEHVHMIRSHRRISDTQASQIVLGDESGLRPKDLHEYISKQAGGIKTVGFTKKDLTNYLETKRKQSLKYGEVGALMMYFKKESENPSFYYDLQMDVEEKITNIFWADAQMINDYGYFGDVITFDTTYKTNKGYRPLGVFVGLNNHRQTVIFGAALLYDETIPSFKWLFETFLKAIGGKKPKTMMTDQDAAMAKAISLVMPETFHGLCTWHIRQNALRHVNHLYQKSSRFGLDFEACIDLHEDEGEFLNAWNSLLVEHNILEGSWLHTIFQLKEKWAWTYVRKTFTAGMRSTQLSESFNVDLKNHLKSDLNLVQFFTHFKRAVNGKRNKESEAEYESKNKLPRLKMKKARMLIQAANVYTPRIFEEFQEEYEEYQDTCIKDLKKGLYAVTNYDNPTERIVMGNAMEQKVSCDCRKFETHGVSCSHALKVLDVMNIKLIPETYILKRWRRNARLGSDQDWKGRHVELDIKAHFMKRYNELCPRMVKLTNKASETHETYTFLSKVYEESSKIIDDMLAKKYVDGESGGMVHVSISIANDEIDNVDTVCMAKGIANRECSRKQKKRYKSWIEKKDKKTKMCSKRKRSGENLVQLLPQETTVQATQSSQVGNGTQHQATIQES* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1398 779 MobiDBLite consensus disorder prediction 1 20 - -
Mtr8g1398 779 Pfam MULE transposase domain 281 375 IPR018289 -
Mtr8g1398 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 22 728 - -
Mtr8g1398 779 SMART 26again6 569 596 IPR006564 GO:0008270
Mtr8g1398 779 ProSiteProfiles Zinc finger SWIM-type profile. 547 594 IPR007527 GO:0008270
Mtr8g1398 779 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 728 IPR031052 GO:0006355
Mtr8g1398 779 Pfam FAR1 DNA-binding domain 72 162 IPR004330 -
Mtr8g1398 779 MobiDBLite consensus disorder prediction 1 17 - -
Mtr8g1398 779 MobiDBLite consensus disorder prediction 757 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1398 Mtr-Chr8 17398754 17401957 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr8g1398 MULE 2.6e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1398 - - cam:101500125 1202.19