Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1374 ATGGAGGGATTTCTGAAAGACTTCGAATTAGAGGATAAGGATCGGAGTATAGATGCGTTGAGCCGTTGGAGAAGCGCCGTCTCGCTGGTGAAGAATCCCCGTAGAAGGTTCCGGAATGCAGCGGATCTCGGAAAACGTGTCCTGTTAGATGAAAAGCAGGAAAAGTTTCGGACTGCACTAAATGTTCAAAGAGCAGCTTTACATTTTCACCCGACTGCTATTGCTGATCCTGATAATGTTGGAGTGCGTGTTGATGGTTTTGATATTGATCCAGATTCAATTGCATCTCTTGTTCATAACTATGATAACAATGGTTTCAAAAAAATTAATGGAGTTGAAGGCATTGCAAGGAAACTTCGTGTCTCAGTGGCAGCTGGTGTTAGGGAAGATAGCCTAAATACCCGGCAACTCTATTTTGGGTTTAACCGCTATGCAGAAAAACATGCGAAACCTTTTCTTAAATTTGTGTGGGAATCAATGCTAGACTCAACACTCATTTTTCTTATGGTTTGTTCCATAGTTTTAATAGGTGGAAAATTTGCCACTGAAGGGTTGCTAGTAAATGTGTATGATGAGGTTGGAATTATACTTGGTGTATTCTTTTTGGTCGTATTTACATCTGTCAATGATTACCATCAATCATTGAAGTTCTGCGAATGGGACAGAGAGAACAAGAATATTTCAGTTAAGGTCACACGGGATGGGAAAAGACAGAAGATATCGATTTATGATCTCGTAGTAGGAGACATTGTTCATTTGTCAATTGGGGATCAAATACCTGCTGATGGGATTTGCATATCAGGAAGTAATTTACACATCGACGAATCAAGTTTAACTGGTCAGGTTGACCCAGTTTATGTAAATCAAGAAAACCCTTTTCTACTTTCGGGAACCAAAGTGATAGATGGGTCAGGGAAGATGCTAGTGGCAGCTGTTGGCATGAGGACTGAATGGGGAAAGTTAGTGGAAGTTTTGAATGACGTAGGGGTGGAGGAAACGCCATTGCAGGTGAAACTGAACGGAGTTGCTACTATTGTTGGTAAGATTGGCTTGAGTTTTTCTCTTCTTACATTAGCTGTGTTGGTGATACAATTTTTTGTGGATAAAGCAACTCGCGGAGATTTTACTAATTGGTCCTCAAAAGATGCTATGAAGCTGCTGAACTACATTAATATACTTGTGACAATGATAGTCATTGCTGTTCCAGAAGGTTTACCATTGGCCGTGACACTTAACCTTGCTTTTGCAACGAAAAGTTTAACAAATGATAGGGCACTAGTGAGGCATCTTTCTGCATGTGAAACAATGGGTTCTGCCAGTTATCTTTGCTTAGATAAAACAGGGACAGTGACCTCCAATTGCATGGTGGTGAATAAACTATGGATATCTGGAGAAGTTGTGGAGATGAAAGATAATAGGAATGGAAATAAACTGAAAGGAAAGATATCTGAAGAAGTTCTGAACATACTTTTGCAGGCTTTATTCCAAAATAATGCTTCCGAAATGGTTAAGGATAAACAAGGAAAGACCACAATATTGGGAACTTCAACAGATTCAGCATTGTTGGAATTTGGCTTGCTGTTGGGGGGTAATTTTGATGTCCAATGCCAATTGTATAGTAAACTTAAGATTGAGTCTTTTAATCCTGTTTACAAGAAGATGACAGTCCTTGTTAGTCTTCCCAATGGTGGACTAAGAGTTTTCTGTAAAGGTGCTTCTGAAATAATAATTAAAATGTGTGAAAAAATCATTGACTGCAATGGAGAATCTGTTGATTTCCTTGAAAACCATGCGAAGCATGTCGAGCATGTTCTAAAAGATTTTGCCTCTGAACCTTTGAGAACTATTTCTTTAGCTTACAAAGATATAAATGTAATCCCTACTGAAAACAACATCCCTGATAATGGCTATACACTGATAGCCATTGTAGGAATCAATGATCCTATACGCCTTGGTGTAAAAGACGTTGTTCAAACTTGTTTAGCTGCAGGAGTAACCATTGCCATGGTCACTGGTGATGATATGAATATAGCTAGGACTATTGCTAAAGAATGTGGTATACTCACCAATAATGGTTTAACCATTGAAGGACAAGAATTTCGGAACTTGTCTACAATGCATATGAAGGTTACCATACCACAAATTCAGGTGATGGCGCGATTCCTACCACATGACAAACACTCCATTGTAGCTTCTCTGAAGGATATGTTTGGTGAGGTTGTTGCTGTTACTGGTGATGGAATCAGTGATGCTCCTGCACTGCATGAGGCACACATTGGAGTTGCCATGGGATTATCAGGAACAGAGATTGCCAAAGAAAATGCTGATATAATTTTAATGGATGACAACATCACAACTATTGTCAATATTATCAAATGGGGACGTGCAGTATACATAAACATTCAAAAATTAGTGCAGTTTCAGTTAACAGCCATTATTGTTGCTCTGGTGATCAACTTTATTTCTGCTTCTGTCACAGGTTATGTCCCGCTAACAGCTGTGCAATTGCTTTGGGTCAACTTGATCATGGACATCCTCTGCCCTTTAGCTCTTGTCAGTGAGCCACTTAACGATGAACTTATGAAGAGGCCTCCAGTTGGAAGGGGAGAAAAATTTATCACGAATGCCATGTGGAGGAATATTTTTGGCCAAAGCATATATCAAGTTATTGTCCTTGTGGTTCTTAATTTTGAAGGGAAGAATATACTTAGTATAAGTGGTTCAAATGCAACTGATGTGCTTAGAACTTTGATCTTCAACTCCTTTATATTTTTTCAGGTATTCAATGAGATAAACTGCAGAGAGATAGAAAAGATAAACATTTTCAAAGGCATTTTAAACAGCTGGGCGTTTTTGGTCATAATTTTCTCAACAGTTGCAATTCAAGTAATCATTGTGCAGTTCCTTGGCAATTTTGCCTGTACAGTGTCTCTGAACTTGGAGCTCTGGTTAATCAGTGTTTTAATTGGTGCTACTAGCATGCTTATAGCTTGTCTTCTGAAGTGCTTCCCAATTGAAAGACATGTAAGTATTCGCCGTGATGGTTACCAGGCACTTTCTGCACAACCATAG 3072 0.3906 MEGFLKDFELEDKDRSIDALSRWRSAVSLVKNPRRRFRNAADLGKRVLLDEKQEKFRTALNVQRAALHFHPTAIADPDNVGVRVDGFDIDPDSIASLVHNYDNNGFKKINGVEGIARKLRVSVAAGVREDSLNTRQLYFGFNRYAEKHAKPFLKFVWESMLDSTLIFLMVCSIVLIGGKFATEGLLVNVYDEVGIILGVFFLVVFTSVNDYHQSLKFCEWDRENKNISVKVTRDGKRQKISIYDLVVGDIVHLSIGDQIPADGICISGSNLHIDESSLTGQVDPVYVNQENPFLLSGTKVIDGSGKMLVAAVGMRTEWGKLVEVLNDVGVEETPLQVKLNGVATIVGKIGLSFSLLTLAVLVIQFFVDKATRGDFTNWSSKDAMKLLNYINILVTMIVIAVPEGLPLAVTLNLAFATKSLTNDRALVRHLSACETMGSASYLCLDKTGTVTSNCMVVNKLWISGEVVEMKDNRNGNKLKGKISEEVLNILLQALFQNNASEMVKDKQGKTTILGTSTDSALLEFGLLLGGNFDVQCQLYSKLKIESFNPVYKKMTVLVSLPNGGLRVFCKGASEIIIKMCEKIIDCNGESVDFLENHAKHVEHVLKDFASEPLRTISLAYKDINVIPTENNIPDNGYTLIAIVGINDPIRLGVKDVVQTCLAAGVTIAMVTGDDMNIARTIAKECGILTNNGLTIEGQEFRNLSTMHMKVTIPQIQVMARFLPHDKHSIVASLKDMFGEVVAVTGDGISDAPALHEAHIGVAMGLSGTEIAKENADIILMDDNITTIVNIIKWGRAVYINIQKLVQFQLTAIIVALVINFISASVTGYVPLTAVQLLWVNLIMDILCPLALVSEPLNDELMKRPPVGRGEKFITNAMWRNIFGQSIYQVIVLVVLNFEGKNILSISGSNATDVLRTLIFNSFIFFQVFNEINCREIEKINIFKGILNSWAFLVIIFSTVAIQVIIVQFLGNFACTVSLNLELWLISVLIGATSMLIACLLKCFPIERHVSIRRDGYQALSAQP* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1374 1023 Pfam E1-E2 ATPase 227 421 - -
Mtr8g1374 1023 Pfam Cation transporter/ATPase, N-terminus 111 174 IPR004014 -
Mtr8g1374 1023 Gene3D - 453 648 IPR023299 GO:0000166
Mtr8g1374 1023 SFLD p-type atpase 425 796 IPR044492 -
Mtr8g1374 1023 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 449 653 IPR023299 GO:0000166
Mtr8g1374 1023 SUPERFAMILY Calcium ATPase, transmembrane domain M 111 1005 IPR023298 -
Mtr8g1374 1023 PANTHER CATION TRANSPORTING ATPASE 51 1010 - -
Mtr8g1374 1023 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 106 1006 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mtr8g1374 1023 SUPERFAMILY Calcium ATPase, transduction domain A 228 323 IPR008250 -
Mtr8g1374 1023 SUPERFAMILY HAD-like 442 847 IPR036412 -
Mtr8g1374 1023 SFLD Haloacid Dehalogenase 425 796 - -
Mtr8g1374 1023 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 46 IPR024750 GO:0005516
Mtr8g1374 1023 Gene3D - 15 71 - -
Mtr8g1374 1023 Gene3D - 158 1002 - -
Mtr8g1374 1023 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 196 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1374 1023 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 714 833 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1374 1023 Pfam Cation transporting ATPase, C-terminus 829 1002 IPR006068 -
Mtr8g1374 1023 ProSitePatterns E1-E2 ATPases phosphorylation site. 445 451 IPR018303 -
Mtr8g1374 1023 Pfam Cation transport ATPase (P-type) 498 583 - -
Mtr8g1374 1023 Gene3D - 126 326 - -
Mtr8g1374 1023 PRINTS P-type cation-transporting ATPase superfamily signature 274 288 - -
Mtr8g1374 1023 PRINTS P-type cation-transporting ATPase superfamily signature 443 457 - -
Mtr8g1374 1023 PRINTS P-type cation-transporting ATPase superfamily signature 641 652 - -
Mtr8g1374 1023 PRINTS P-type cation-transporting ATPase superfamily signature 663 673 - -
Mtr8g1374 1023 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Mtr8g1374 1023 PRINTS P-type cation-transporting ATPase superfamily signature 768 780 - -
Mtr8g1374 1023 PRINTS H+-transporting ATPase (proton pump) signature 601 619 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1374 1023 PRINTS H+-transporting ATPase (proton pump) signature 744 760 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1374 1023 PRINTS H+-transporting ATPase (proton pump) signature 776 801 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1374 1023 Gene3D - 440 789 IPR023214 -
Mtr8g1374 1023 PANTHER CALCIUM-TRANSPORTING ATPASE 51 1010 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1374 Mtr-Chr8 17010790 17019943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1374 54 1023 Primary Pumps ATPases AT3G57330 59.179 0.0 1166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1374 K01537 - gmx:100798481 1261.13