Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1372 ATGCATGATGATTGCTCACCTTCAATTGTTCATCGTGATATATCCAGTAAGAATGTTGTTTTGGATTTGGAATATGTTGCTCATGTCTCAGATTTCGGAACAGCTAAGTTTCTTAATCTCGATTCTTCCAATTGGACCGCTTTTGTAGGCACCTTTGGATACACTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAGATGTGATGTGTATAGTTTCGGGGTATTAACCTTGGAAATACTTTTTGGAAAGCATCCTGGAGACATTGTATCTACGTTGTTGCAATCAAGTACCGTAGGCCTGACTAGTGATGCTATGTCGTTGACTGCTATGTTAGATCAACACCTCGCTTTTCTTACTAATGATATCGCGAAAGAGGTGGTATCAATTATAAGGATTGCATGGCATTGCTTAACTGAGAGCCCACATAGTCGCCCTACAATGGCCCAAATTTGCAAGGAGATTGCAATATCAAAGTCATCTTCGAGTTAA 495 0.4 MHDDCSPSIVHRDISSKNVVLDLEYVAHVSDFGTAKFLNLDSSNWTAFVGTFGYTAPELAYTMEVNERCDVYSFGVLTLEILFGKHPGDIVSTLLQSSTVGLTSDAMSLTAMLDQHLAFLTNDIAKEVVSIIRIAWHCLTESPHSRPTMAQICKEIAISKSSSS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1372 164 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 162 - -
Mtr8g1372 164 Pfam Protein kinase domain 8 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1372 164 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Mtr8g1372 164 SUPERFAMILY Protein kinase-like (PK-like) 1 155 IPR011009 -
Mtr8g1372 164 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 162 - -
Mtr8g1372 164 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1372 164 Gene3D Transferase(Phosphotransferase) domain 1 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1372 Mtr-Chr8 16993648 16995058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1372 1 152 Receptor kinase-like Gene Family AT1G75820 40.741 2.47e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr8g1372 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1372 - - mtr:MTR_8g044940 329.717