Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1362 ATGGATACAAAAAACCCATCTGGGAATTCTTCAAAGATTGAAACTTTCATGCATAATTCATCATCAAGAAGAAGTTCTGGTAGAAATTCAATAAGGGAAGTCACTTTTGGTCACTCTGAGTCCAAACCTGTGAGATATGGATCAAAGGGTGCTGTTGATTCTGAAGCATTCAGCATGTCTCAGAAAGAAATCAGTGATGAAGATGCTAGGTTGATTTATGTTGATGATCCTGATAGAACAAATGAGAGATTTGAATTTGCTGGGAATTCGGTTCGGACCGGAAAATACTCTTTTATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTTATAATTGCTATTCTTAATCAGTTACCTCAACTAGCTGTTTTTGGTAGAGGTGTATCAATTTTGCCATTAGCTTTTGTTCTTCTTGTTACTGCTGTGAAAGATGCATATGAGGATTGGAGGAGACATAGATCAGATAAAGTTGAGAATAATAGGTTAGGATTGGTTTTGGTTAATGGTCATTTCATTGAGAAGAAATGGAAAGATATTAGAGTTGGTGAGATCATTAAAATCAATGCAAATGAACCGATTCCTTGTGATTTTGTTTTGTTGTCGACGAGTGATCCTACTGGTGTTGCTTACGTTCAAACTCTTAATCTAGATGGTGAGTCTAATTTGAAGACTAGATATGCAAAACAAGAGACTCAATTTAAGTTTCATGAAAAGGAGAGGTTTAGTGGTTTGATTAAGTGCGAGAAACCAAATAGGAATATATATGGATTTCAGGCTACAATGGAGGTTGATGAAAAGAGATTGTCACTTGGTTCCTCGAATATTGTACTTAGAGGATGTGAACTTAAGAATACTAATTGTGTGGTTGGTGTTGCCGTGTATTGTGGTCGTGAGACAAAAGCTATGCTCAACAACTCAGGAGCTCCGTCTAAGAGGAGCCGTCTTGAAACACAAATGAACTCTGAGATAATCATGCTTTCGTTCTTTCTTGTAGCTTTGTGTTCAGTTACTTCAGTTTGCGCTGCTGTTTGGTTAAAGCGAAACAAGAATGAATTGAACCGATTGCCTTATTATAGGAAATTGGATTTTTCAAAGGGAAAAGAGGAAAGTTATCAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTCATGTCGGTTATAGTTTACCAGGTTATGATCCCGATATCCTTGTACATTTCTATGGAACTTGTTCGTGTTGGTCAGGCGTACTTCATGATCAAAGATTCTAGATTGTATGATGAGGCAACAAATTCAAGATTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCGGACAAAACTGGCACTCTGACTGAGAACAAGATGGAGTTTCAATGCGCTAGTATTTGGGGTGTCGATTACAGTTCTGCAAAACCCAGCCTTGAGAATGAGCAAGTTGAATACTCTCTTCAAGTGAATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCAAGAGCTTTTGCGATTGGCAAAAAGTGGATTTGCAAGCAAAGATGGAAAACGGATTTACGATTTCTTTCTTGCACTGGCCGCATGCAATACTATTGTGCCTCTTGTAGTTGACACAGCCGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCCTTGACATATGCTGCCGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGTCACATAATGATTGATATTCATGGAGAACAACAAAGGTTCAATGTCTTGGGTTTACATGAATTCGATAGTGATCGGAAAAGGATGTCAGTTATATTGGGGTGCAACGACAATTTGGTGAAACTTTTCGTCAAAGGGGCGGATACATCAATGTTCAGTGTGATCAATAAATCATTGAATACAGACATAATACAGGATACTGAAACCCATCTTCACTCTTATTCTTCTGTGGGTTTGAGGACACTTGTTATTGGGATGCGGAACTTAAATGCTTCAGAATTTGATCAATGGCACTTTGCCTTTGAGGCAGCAAGTACTTCTATGATTGGCAGGGCTGCTTTGCTTCGCAAGGTTGCTGCAAATGTAGAGAATAACCTATGCATATTGGGCGCTACTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAATCTATCGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAAGAAACTGCCATATCAATTGGCTACTCGTCAAAGCTACTAACAAGTGGCATGACTCAGTTTAGAATTAAGAGCAATAATCGAGAGTCGTGTAGACGACGTTTACAGGATGCACTTCTCATGTCTAGAAAAAACGTAACTGCACCAGAGGTTGGCAACTATATTGAAGGAAGTTCTGATGGAGTTGTTTCAACTCCTATGGCATTGATTATTGATGGTACCAGCCTTGTATATATTCTTGATAGTGAACTTGAAGAAGAGCTCTTTGAACTTGCACGAAGATGTTCCGTTGTTCTTTGTTGTCGAGTAGCTCCACTGCAAAAGGCTGGGATTGTCTCTCTCGTAAAGAATAGGACGGCCGATATGACTCTAGCCATCGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGGGTTGGCATCAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTCGGTTTTTAGTTCCTCTCTTATTTGTACACGGACACTGGAATTACCAACGACTAGGCTACATGGTGCTATACAATTTTTACAGAAATGCTGTCTTTGTGCTCATTCTGTTTTGGTATGTTCTCTTCACTGCTTTCACTTTGACAACAGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCAGTGCCAACTATTGTTGTTGCCATTTTTGACAAGGATCTTAGTAAAAGGACTCTTCTACAGAGTCCTCAGCTTTATGGGGCTGGACAAAGACAAGAGGCCTACAACAAAAAATTGTTTTGGTTGACGATAGCCGATACGTTATGGCAAAGCGTTGTTGTCTTTTTTGTTCCTCTCTTTGCATATTGGGGAAGCACTGTAGATATCGCAAGTATGGGGGATCTTTGGACTATTTCGATAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTTCTCATGCATCCATTTGGGGGTCTATCATTGCAACTTTCATATGTGTCATGGTTGTTGATGCTATACCGTCCCTTCATGGTTACTGGGCTATTTTCGATGTGGCAAGCACCGCATTATTCTGGTTATGTTTGCTAGGAATACTAATAGCAGCATTGCTTCCACGTTTTGTTGTAAAGTTTATTTATCAATATTATTGTCCCGACGATATTCAGATTTCAAGAGAAATCGAGAAGTTTGAGAATAGAAGGGTCAATGGAGATAGACAGATAGAAATGCTTCACATCTCAAATCCACAAAGATAA 3531 0.3928 MDTKNPSGNSSKIETFMHNSSSRRSSGRNSIREVTFGHSESKPVRYGSKGAVDSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEVDEKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVALCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSKGKEESYQYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKPSLENEQVEYSLQVNGKVLKPKMKVKVNQELLRLAKSGFASKDGKRIYDFFLALAACNTIVPLVVDTADPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIMIDIHGEQQRFNVLGLHEFDSDRKRMSVILGCNDNLVKLFVKGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRNLNASEFDQWHFAFEAASTSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPESIESLRKAGIKVWVLTGDKQETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVTAPEVGNYIEGSSDGVVSTPMALIIDGTSLVYILDSELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDKDLSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSVVVFFVPLFAYWGSTVDIASMGDLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDVASTALFWLCLLGILIAALLPRFVVKFIYQYYCPDDIQISREIEKFENRRVNGDRQIEMLHISNPQR* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1362 1176 SFLD p-type atpase 440 927 IPR044492 -
Mtr8g1362 1176 CDD P-type_ATPase_APLT_Dnf-like 88 1036 - -
Mtr8g1362 1176 Gene3D - 558 691 IPR023299 GO:0000166
Mtr8g1362 1176 SUPERFAMILY HAD-like 443 917 IPR036412 -
Mtr8g1362 1176 Pfam Phospholipid-translocating ATPase N-terminal 72 137 IPR032631 -
Mtr8g1362 1176 SUPERFAMILY Calcium ATPase, transmembrane domain M 86 1143 IPR023298 -
Mtr8g1362 1176 ProSitePatterns E1-E2 ATPases phosphorylation site. 458 464 IPR018303 -
Mtr8g1362 1176 Gene3D - 146 313 - -
Mtr8g1362 1176 SFLD C1.7: P-type atpase like 440 927 - -
Mtr8g1362 1176 Pfam Cation transport ATPase (P-type) 565 639 - -
Mtr8g1362 1176 Gene3D - 712 916 IPR023214 -
Mtr8g1362 1176 PRINTS P-type cation-transporting ATPase superfamily signature 456 470 - -
Mtr8g1362 1176 PRINTS P-type cation-transporting ATPase superfamily signature 876 895 - -
Mtr8g1362 1176 MobiDBLite consensus disorder prediction 1 36 - -
Mtr8g1362 1176 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 1174 - -
Mtr8g1362 1176 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 462 728 IPR023299 GO:0000166
Mtr8g1362 1176 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 847 962 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr8g1362 1176 SUPERFAMILY Calcium ATPase, transduction domain A 171 310 IPR008250 -
Mtr8g1362 1176 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 86 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mtr8g1362 1176 MobiDBLite consensus disorder prediction 1 49 - -
Mtr8g1362 1176 Pfam Phospholipid-translocating P-type ATPase C-terminal 904 1143 IPR032630 -
Mtr8g1362 1176 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1362 Mtr-Chr8 16793790 16799702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1362 21 1176 Primary Pumps ATPases AT5G04930 69.317 0.0 1691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1362 K14802 - gmx:100784988 1901.33