LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1361	ATGTTGGAGTTACCATTCAACATGACACTTAGCTTCCCTGCATTTTTCAAGTCCTTACCTTTTGCTCAAAACTTGGAGCCTGAAATTCTAAATGGTGCAATTGCTCTTGTTGCTGTAGGCCTAACAGCTGCTTATATTTACTATCGCAAAAACCCCAAAGGTAGCTTGGACCCCAAAAATTTCAAAGAATTTAAACTTGTAAAGAAGACCATGATCAGCCCCAATTCTGCAAGATTCAAATTTGCCCTTCCTACTCCTAATTCGATATTGGGACTTCCTGTTGGAAAAAACATACTTGTCAGAGGAAGAGATAGTCAAGGAGAAGAAGTTATGAGATCATATACTCCAATCACATTGGATTCAGATATTGGCTATTTTGAATTAGTTGTGAAGATGTATCCAAATGGAAAAATGTCTCACCATTTTAGACAAATGAAGGAAGGTGACAACTTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTTGGAATGATTGCTGGAGGTTCAGGCATTACCCCAATGTTTCAGGTCATAAGAGCCATACTGGAAAACCCAAAGGACAAAACAAAGGTGTACCTTATTTATGCCAATGTGACAGTGGACGATATCCTACTAAAGGAAGAACTAGATCGCTTTGCAGACAAATTTCCTCACAGATTCCATGTCTTTCACGTTCTTAATAAGCCTCCTAATCAATGGAATGGAGGTACTGGGTACATATCAAAGGAGATGATTGAATCTCATTGTCCAGCACCTGCCCCTGATATCCAGATACTTAGATGTGGTCCACCACCCATGAATAAAGCCATAGCAACTCATCTTGCAGCACTTGGATACACATCAAACATGCAGTTTGAGTTCTAA	888	0.4054	MLELPFNMTLSFPAFFKSLPFAQNLEPEILNGAIALVAVGLTAAYIYYRKNPKGSLDPKNFKEFKLVKKTMISPNSARFKFALPTPNSILGLPVGKNILVRGRDSQGEEVMRSYTPITLDSDIGYFELVVKMYPNGKMSHHFRQMKEGDNLAVKGPKGRFSYKPGQVRAFGMIAGGSGITPMFQVIRAILENPKDKTKVYLIYANVTVDDILLKEELDRFADKFPHRFHVFHVLNKPPNQWNGGTGYISKEMIESHCPAPAPDIQILRCGPPPMNKAIATHLAALGYTSNMQFEF*	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1361	295	Pfam	Oxidoreductase NAD-binding domain	172	279	IPR001433	GO:0016491
	Mtr8g1361	295	Gene3D	Translation factors	52	154	-	-
	Mtr8g1361	295	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	295	IPR001834	GO:0016491
	Mtr8g1361	295	PRINTS	Cytochrome B5 reductase signature	90	101	-	-
	Mtr8g1361	295	PRINTS	Cytochrome B5 reductase signature	112	119	-	-
	Mtr8g1361	295	PRINTS	Cytochrome B5 reductase signature	148	162	-	-
	Mtr8g1361	295	PRINTS	Cytochrome B5 reductase signature	171	190	-	-
	Mtr8g1361	295	PRINTS	Cytochrome B5 reductase signature	209	220	-	-
	Mtr8g1361	295	PRINTS	Cytochrome B5 reductase signature	265	273	-	-
	Mtr8g1361	295	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	171	190	IPR001709	GO:0016491
	Mtr8g1361	295	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	209	220	IPR001709	GO:0016491
	Mtr8g1361	295	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	265	273	IPR001709	GO:0016491
	Mtr8g1361	295	SUPERFAMILY	Riboflavin synthase domain-like	53	164	IPR017938	-
	Mtr8g1361	295	Gene3D	-	155	292	IPR039261	-
	Mtr8g1361	295	CDD	cyt_b5_reduct_like	64	295	-	-
	Mtr8g1361	295	Pfam	Oxidoreductase FAD-binding domain	64	162	IPR008333	-
	Mtr8g1361	295	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	151	290	IPR039261	-
	Mtr8g1361	295	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	59	163	IPR017927	GO:0016491
	Mtr8g1361	295	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	295	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1361	Mtr-Chr8	16775892	16779399	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g1361	45	295	NADPH P450 reductases	AT5G17770	67.331	9.39e-132	373

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1361	K00326		-	gmx:100784114	511.531