Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1357 ATGAAGAGGTCTCCATCATCTTCAAGTTCATCATCTTCTATTGGATTTGAGAATCCAATTCAATCAGTGAAAAAAAGAGGTGCTAAGAATCCAAAGAAGAATCTCAATGTCAAGTCACAGAATTTAAAGCAGAAGAAAAACCAAACAAATGGTGCTAGTAGAAGAAGCTCTATTTACAGAGGAGTTACAAGACATAGATGGACCGGAAGGTTTGAAGCTCATCTATGGGATAAGACTTCTTGGAACAAGATTCAGAACAAGAAGGGAAAACAAGTTTATTTGGGTGCTTATGATACTGAAGAAGCAGCAGCTCATACTTATGATCTTGCAGCACTTAAGTATTGGGGGAAGGATGCAACCTTGAATTTTCAGATAGAAACTTATGCAAAAGAGTATGAAGAAATGGAAAAGTCCTCAAAAGAAGAGTATTTGGCCTCATTGAGGCGCCAAAGTAGTGGTTTTTCTAGAGGCATTTCTAAGTACCGTGGGGTTGCTAGGCATCACCATAATGGTCGGTGGGAAGCTCGTATTGGAAGAGTCTGTGGTAACAAGTACCTCTACTTGGGAACATACAAAACTCAAGAGGAGGCAGCAATGGCATATGATATGGCAGCAATAGAGTATAGAGGAACGAATGCAGTGACAAATTTTGACATAAGCAACTATGTTGACAGATTGAAGAAGAAAAATGAAGAAACAAAACAAACAGAACCACAAACAACTATAGGAATTGTTCAATATTCTCCTCCTGATTCTAAAGAAGCATCAGAAGAACAAACACCAACAACTACACCATCACCATCACAAGAAAATCTAGTACAAATTGTACCTATTCAGCCACAAGTTCAACAACATGTTCCTCCAACTGATCAAGAACACACATTAGTTAATGTTATGGATCATTATTTTGACCTAGACCTACCATGGAGCTTCGTGTGTAATGGATTGTTAGAGTTTCAAGACACAAACATGGCTTTAAGCAAAACTGATCAAGATTTAATTGATATATTTGATGGCTCAGGCTTTGTGGAAGACATTGGTTTGATGTTCAACATAGAAGAACCTTGTAGTGGTGAAAGTGATTGTGGAGGATTATTAAATGGAGATGCTGGAAACATGCTTGTGGATGAAGATGATTTCAAGAATGAAATATTATCCTTAGAATCTTAA 1170 0.3744 MKRSPSSSSSSSSIGFENPIQSVKKRGAKNPKKNLNVKSQNLKQKKNQTNGASRRSSIYRGVTRHRWTGRFEAHLWDKTSWNKIQNKKGKQVYLGAYDTEEAAAHTYDLAALKYWGKDATLNFQIETYAKEYEEMEKSSKEEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAMAYDMAAIEYRGTNAVTNFDISNYVDRLKKKNEETKQTEPQTTIGIVQYSPPDSKEASEEQTPTTTPSPSQENLVQIVPIQPQVQQHVPPTDQEHTLVNVMDHYFDLDLPWSFVCNGLLEFQDTNMALSKTDQDLIDIFDGSGFVEDIGLMFNIEEPCSGESDCGGLLNGDAGNMLVDEDDFKNEILSLES* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1357 389 MobiDBLite consensus disorder prediction 230 269 - -
Mtr8g1357 389 MobiDBLite consensus disorder prediction 33 57 - -
Mtr8g1357 389 CDD AP2 159 220 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 Pfam AP2 domain 159 210 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 Pfam AP2 domain 58 116 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 ProSiteProfiles AP2/ERF domain profile. 160 218 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 302 - -
Mtr8g1357 389 ProSiteProfiles AP2/ERF domain profile. 58 124 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 PRINTS Ethylene responsive element binding protein signature 200 220 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 CDD AP2 57 125 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 Gene3D AP2/ERF domain 58 126 IPR036955 GO:0003700|GO:0006355
Mtr8g1357 389 Gene3D AP2/ERF domain 159 220 IPR036955 GO:0003700|GO:0006355
Mtr8g1357 389 MobiDBLite consensus disorder prediction 1 19 - -
Mtr8g1357 389 MobiDBLite consensus disorder prediction 1 59 - -
Mtr8g1357 389 SUPERFAMILY DNA-binding domain 159 220 IPR016177 GO:0003677
Mtr8g1357 389 SUPERFAMILY DNA-binding domain 57 125 IPR016177 GO:0003677
Mtr8g1357 389 MobiDBLite consensus disorder prediction 236 269 - -
Mtr8g1357 389 SMART rav1_2 58 130 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 SMART rav1_2 160 224 IPR001471 GO:0003700|GO:0006355
Mtr8g1357 389 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1357 Mtr-Chr8 16708808 16724004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1357 8 285 AP2-EREBP Transcription Factor Family AT5G57390 47.751 8.49e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mtr8g1357 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1357 - - gmx:100527432 444.506