Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1354 ATGGCAGAAGTTCTCACCCCCATTCCCTCCGATTCCCTCGACCAATCCTCCCCAACCACCACCTCCCCTCCACCACCGCCTCCACAACCACAATCACCTCCTCCCACCTCCGCCCCCGATTCCGATCTCCCTCTACCACCTCCACAATCCTCCTTCCGCCGCAGAGACTACCGCCGCGATGATAGAGATAGAGATTTCGATCGTCCTCCTCCTCGCCGCGAGTATTATGACCGTAACAACATATCGCCTCCGAGGGATAGAGATAGAGATTTCAAACGCAGGCGTAGTCCCAGTCCTCCTCCATATCGTGACCGCCGTCATTCACCACCAATGCGAAGGTCGCCCCCGCATTATAATAATTATAAACGCTCCAGGAGAGGTGGTAGTCCCCGTGGCGGTTATGGACCCGATGATAGATCTGAATATGATAATTACGGTGGTTATGAAAGGGGTGGAAGAGGTGGTTATGATAGGGGTGGAAGAGGTGGCTATGATAGGGGTGGACGAGGTGGTAATGATAGGGGTGGAAGAGGTGGCTATGATAGGGGTGGAAGAGGTGGTTATGGTGATGACAGGTCTTATGGTAGGTTTGGAAATCGTTCTGGAGGAGGATATCAAAATGGGGTCTCTGGTATGTTAATAGTTGCTAATTACATAGGTATGGAATCCAATCGTGGTTATGCAGACTTGCCAAGTGGCGGTGGGCAAAGAGAAGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTGGAGGATGATATACTACCAACTGAAGCAGAACGTAGGTATCAAGAATACAAATCAGAGTATATTTCTACACAAAAAAGAGCTTATTTCAGTGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAGTGCTCGACAGCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGATCCAAATCCGGGTTTAAGTGCCTCTTTATCCAGCAAATCAGGGCAAGCTAGCGAGCCAAATTCAGAGGAGGAAGCGGAAGACCAAAGAAGAAGAGATGGGTGGGGTTCTAATAAAAAAAGTGATTTCTCAGCTGCTCCAAAGGCTCATCCTGTCAGTTCTGAACCAAGACGAATACAAGCAGATGTTCAACAGGCTCAGGCCCTTGTTCGCAAGCTTGACACAGAAAAGAGGATTGGAGATAATATTTTATGCAGCAGTGATCACAACAAAACTGATGACAAGTCTCACAATGGATCTGTGGGTCCCACAGTCATTATAAGAGGCCTGACATCTGTTAAGGGTTTAGAAGGTGTTGAGCTTTTGGACACACTGATTACATATCTGTGGCGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAGGCTAAGGGTTTTAGGCATGTTAGGCCAGAAAGAAAAGGGCATGAAGAAACAGGTAAATCAGGGTCTGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCATTGGAAGTACTGGCTGCTAAGGAGAAAATGGATGCTGCAGCAATTGAAGTGTTGGATCCATATGTTAGAAAAATCAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGTACAAACATCTGAAGCTAAAGCACCCTGAGCTTGCTCTTGAACAAACTTCGAAATTGCGTGAGGATCTCTATACTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAACCTCAGAAGGACAACAGGCCTTTAAATCAAAGGTTAGGTTTTGAGGGCCGATTGAGAGATGATCGTGGTAATCGTCGAGACCATGAACGGTATGACAGAATGAATGGAGATAGAGCTAATTCCCCATCCCGTGAAAGGCAGTCTAAAGCACTTGAGATGGGAAACCATGATGAAACAATGCAAGACACTTTTGCAGGGCCTGGTGTTCCTCCTTTTAGCTCAGATATTCCTCCACCAGTATTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCTTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTTAGAGATCAAGGAGGACCATCTTCATTTGATGGCTCTGGAATAAATATGCTGTCTGGCCCGCATCATATGGGTGGACCGGCACCAATAATTACTCTTCCTCCAGGTTTTAGACCAGATCCTCGGAAGATGCGAAGTTATCAAGATTTGGATGCTCCAGACGAAGAGGTCACCGTGATAGACTATCGGAGTTTGTAA 2322 0.4595 MAEVLTPIPSDSLDQSSPTTTSPPPPPPQPQSPPPTSAPDSDLPLPPPQSSFRRRDYRRDDRDRDFDRPPPRREYYDRNNISPPRDRDRDFKRRRSPSPPPYRDRRHSPPMRRSPPHYNNYKRSRRGGSPRGGYGPDDRSEYDNYGGYERGGRGGYDRGGRGGYDRGGRGGNDRGGRGGYDRGGRGGYGDDRSYGRFGNRSGGGYQNGVSGMLIVANYIGMESNRGYADLPSGGGQREGLMSYKQFIQELEDDILPTEAERRYQEYKSEYISTQKRAYFSAHKDEEWLKDKYHPTNLLTVIERRNESARQLAKDFLLDLQSGTLDPNPGLSASLSSKSGQASEPNSEEEAEDQRRRDGWGSNKKSDFSAAPKAHPVSSEPRRIQADVQQAQALVRKLDTEKRIGDNILCSSDHNKTDDKSHNGSVGPTVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPERKGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVLAAKEKMDAAAIEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLREDLYTQNYMNDPDAPGGKPVMQQPQKDNRPLNQRLGFEGRLRDDRGNRRDHERYDRMNGDRANSPSRERQSKALEMGNHDETMQDTFAGPGVPPFSSDIPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGGPSSFDGSGINMLSGPHHMGGPAPIITLPPGFRPDPRKMRSYQDLDAPDEEVTVIDYRSL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1354 773 MobiDBLite consensus disorder prediction 326 387 - -
Mtr8g1354 773 Pfam Arsenite-resistance protein 2 485 634 IPR007042 -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 347 362 - -
Mtr8g1354 773 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 773 IPR039727 GO:0006397
Mtr8g1354 773 MobiDBLite consensus disorder prediction 154 189 - -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 1 193 - -
Mtr8g1354 773 Pfam SERRATE/Ars2, N-terminal domain 244 325 IPR021933 -
Mtr8g1354 773 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 773 - -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 52 111 - -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 326 343 - -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 588 652 - -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 19 46 - -
Mtr8g1354 773 MobiDBLite consensus disorder prediction 617 652 - -
Mtr8g1354 773 ProSitePatterns Zinc finger C2H2 type domain signature. 546 569 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1354 Mtr-Chr8 16676861 16684284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1354 66 773 C2H2 Transcription Factor Family AT2G27100 60.912 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1354 - - gmx:100817569 952.584