Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1352 ATGGGGATTCAGACAATGGGGTCTCAAGGTGGTGGAGATGGTAGTGGAAAACGGTCACAACTCCACTCTCTTGTGCGGCAAAATTCAGTGTACAGTCTCACACTTGATGAAGTTCAAAATCAATTAGGTGACTTAGGGAAGCCACTAAGCAGTATGAACCTAGACGAGCTTCTAAAAAATGTATGGACTGTTGAAGTGAACCAGTCCACGAATACGGACAATGAAGGCACAGCACAGTCTAGTGAAGCTTGTCTACAACGTCAAGCTAGTCTGGCATTAAAAGCTGCTTTCAGCAAGAAGACTGTGGATGAGGTTTGGAGAGATATCCAACAAAAGAAAGACAGCGAGGAAAAGAAGTCACGAGAGAGACAAACTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCTAATAAAACGAATACCGATACTACGGCTGCGGCCGATTCAAATGTAGCAGTATCACAGTTTCCTTCGCAGGGTCAATGGATACAGTATCCACAACCACAATATCAGCATCTACAACAAAGTTCCATGGGGATTTATATGCCTAGCCAGAGTATGGCACAGCCGTTACACATGGGGTCGGGTGTTTCAATGGAGATTCCGTTTGCAGATAGTCATATGGCATTGGATACGCAGATGCCTGGAAGAAAAAGGAGCACTCCGGAGGATATGGTGGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCACGGAAACAGGCTTACACAAATGAATTGGAGATTAAAGTTTCACGCCTGGAAGAGGAAAATGAAATGCTGAGGAAACGAAAGGAGCTAGAGAATATGTTGCCTTGTGCACCGATTGCTGAACCTAAATATCAGCTACGCCGAATAGCATCCTGTCCATTCTGA 942 0.4469 MGIQTMGSQGGGDGSGKRSQLHSLVRQNSVYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTNTDNEGTAQSSEACLQRQASLALKAAFSKKTVDEVWRDIQQKKDSEEKKSRERQTTLGEMTLEDFLVKAGIVAEASSNKTNTDTTAAADSNVAVSQFPSQGQWIQYPQPQYQHLQQSSMGIYMPSQSMAQPLHMGSGVSMEIPFADSHMALDTQMPGRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRKELENMLPCAPIAEPKYQLRRIASCPF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1352 313 PANTHER BZIP TRANSCRIPTION FACTOR 3 311 - -
Mtr8g1352 313 SMART brlzneu 239 311 IPR004827 GO:0003700|GO:0006355
Mtr8g1352 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 286 IPR004827 GO:0003700|GO:0006355
Mtr8g1352 313 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 246 261 IPR004827 GO:0003700|GO:0006355
Mtr8g1352 313 Gene3D - 241 294 - -
Mtr8g1352 313 CDD bZIP_plant_BZIP46 243 297 - -
Mtr8g1352 313 Pfam bZIP transcription factor 243 287 IPR004827 GO:0003700|GO:0006355
Mtr8g1352 313 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 311 IPR043452 GO:0003700|GO:0045893
Mtr8g1352 313 SUPERFAMILY Leucine zipper domain 243 288 IPR046347 GO:0003700|GO:0006355
Mtr8g1352 313 Coils Coil 259 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1352 Mtr-Chr8 16662696 16666315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1352 23 313 bZIP Transcription Factor Family AT3G56850 53.922 1.69e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr8g1352 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1352 K14432 - gmx:100101875 420.624