Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1323 ATGGCTGGTCGAGGTTCCTTTAACTATGATGTGTTCTTCAGCTTCAGAGGTGAAGACACAAGACTTGGTTTTACCGGAAACCTCTACAGTGCTCTGAGTCAAAGAGGGATCCGTAGTTTCTTTGATGATAAAGAGATTCGAAAAGGAAAAGAAATAACTCCATCACTTGTAAAGGCAATCAAAGAATCCAAGGTTGCCATCGTTGTTCTTTCTCAAAACTACGCTTTTTCTTCCTTTTGTTTAGATGAACTTTCCATCATTCTAGAGTGCTGTGAGGAGAACAAGGGTCAGCTTGTTTTACCTATTTTCTTCAATATTGATCCTTCTGATGTAAGGCACTGTAGAGGAAAATATGGTCAAGCATTGGAGAATCTTGAGGAGAGATTCAAGGGTGACAAGGAGAAACCCAACAAATGGAGGGTTGCTCTACACAAGGCATCTAACATAGCTGGCTTCACTTTCAAAAATGGGAATGAATATGAATGTGATTTCATTTGGCGTATCTTCCAGGACGTCTCCCTCAAGATCAAGCGTAAACTTTTACATGTTGCGAATTATCCAGTTGGATTGGAGTCTCGAGTGGATGAAGTAATCTCGCGTCTGAAGGTTGGCTCTGATGACGTGGTCCACATGGTAGGTGTACATGGAATTGGGGGAATTGGTAAAAGTACTATTGCTCGAGCAGTATATAATTCCATTAGACACCACTTTGAAGGTTTCTGTTGTTTTCTTGAAAATGTGCGGGAGAATTCACACAAATATGGCATATGTCATCTCCAACAAATGGTTCTTTCTGATATACTTGGCTACGAGGATTTTAAGTTGAGATATGTTAGCGATGGGATGGCAATGATAGAGCAAAGGCTCTGCAGTAAAAAGGTTCTTTTGGTTCTCGATGATGTCGACAAAATAGAGCAGTTGCAGGCTATTGCTGGAGCACCTAACTGGTTTGGTTTGGGTAGCAGAGTAATCATTACAACTCGGGACCATGGGTTACTAAAACATCATGAGGTTAAAAGTACATATGAGGTGGAGGAGTTGAATGACAAAGAAGCTCGCGAATTGCTTTGTTGGAATGCTTTCAAAACTGACAAAGTTGATTCAAGATACATCGCCATTTTAAACCGTGCTGTGGGTTATGCTTCTAGGCTTCCATTAGCTTTGGAAGTAATAGGTTCTAACTTGCATGGACAAAAGGAAGACGTTTGCACACATACATTAGATCGGTACGACCGATTTCCAGATAAAAAGATCAAAGACATACTTAAAGTCAGCTATGATTCCTTGGATGAAGATGAGAGGAGTGTTTTTCTTGACATTGCTTGTTTCTTCAATGGACATAAGTTGGCAGATGTCGAAGATATACTCTCGGCTCACTATCACCTATCTGTGGAATATAGTATTAAAGAATTGATTGGAAAATCTCTGATAAAGATTGACAGTGGTCTTGTAACATTACATGACCTGATACAAAAAATGGGCAGAGAAATTGTCCGACTTGAATCACCACATGAGCCTGGCAAACGTAGTAGGTTATGGTTTTGTGAAGATGTAGTCCAAGTTTTAAATGAAAATAAGGGAAGTAGCAAAACTCATATCTTAATTCTGGATTTTCCAAAAGATGAAGCGCACATGAAAGGACCGAAAAGCGAAGAAGTAAATTGGGATGGAGAGGCCTTCAAGGATATGAAAAACCTCAAAACACTTATTATTAGAAATGGTAGTTTCTCCAGCGGCCCCACACATCTTCCAAATAGCTTAAGAGTTTTGAAATGGCAAGGATATCCTTTACTGTCTTTACCATGTTATTTCCATCCAAAGAAACTTTCCATACTTGAGTTACCTGATAGCTGCTTAAAGCCATGCGAACCAATCCAGGCATTTTCACATTTGACAATTTTGGATTTTAGCAACAGTGAATCTGTAACTGAGATACCTGATGTATCTGGTGTCCGAAACTTAGAAAAATTGTCATTTAGATGTTGTGAGATTTTAACTAAAGTTCATGACTCGGTTGGACGTCTGGGAAAACTTAAGATATTGGATGCTTCTGGTTGCAAGAATCTAAAGAATTTTCCACCCATCATATTGACCTCTCTTGAACAACTCAATCTTTCACATTGTTCAATTCTTGAGAGTTTCCCTGAAATATTGGGGAAGATGGAAAAAATAACAGAAATTCAAATAAGGGGGAGTCCTATAAAAGAATATCCATTTTCGATTCAAAACCTTATTCGGCTTCGAAAATTGGAACTGCAAATGTGTGGAATGGTTCAGTTACCTAGTAGCATTTTTATGTTGCCTGAACTAAGTTTGATGCATGTTTCAAAATGTGAAGGGTTGGCCTTATCTGAACAAGACAAAGGTAATAAAATGGTGCTCAAGTCTTCAAACGTGGATCATCTTGTCCTCTCAAACTGCAATATATCCAATGATTTTCTTCCAATAGGTCTTAGCTTTTTTTTCAATGTGAAAGAGTTAAACCTATCAGGGAATAATTTCATAACTCTTCATGCGTGGATCAAAGAGTGTCATCTTCTGAGGAACCTTAAGATGGACGATTGCAGTCTTCTTCGAGAAATTAGAGGGATTCCAAGGAATATAGAAAAAATTTCCGTGAAAGGGTGCATATCCTTGAGATTCTTAGACCTCACAGTTCTACCTGAATGTAATGCAGAATGTTGCTTTCTAAAGGAACTGATTTTGGATGACTGTGCATGTCTTCGAGAAATTACAGGGCTTCCACCAAACTTGAATAGTTTCTCTGCAAAAGGATGCACTTCCTTGACTTTACAGAGTATAAGCATGTTATGTAATCAGGAATGGGTAGAAGCTGGAAACAAAAAGTTATTTTTTCCGGGGAAAAAAATTCCAAAGTGGTTCACGCATCATACAAGGGGAGGGTCAACGTCTTTCTGGTTTTGTAACAAATTCCCTGCTATTTCTCTTTGTCTTGTTATAGGACGTGGGGATGAGAAACATATCAAGGTCAAGTTTAGCCCTCGAGTATGCATCAATGGCCATAAACAGTCGCTAGGTTGTCAGAAAATCTACGAGTTCATGATAGCAACTGATCATGTGCTTTTGCTACAGTTTGAAGATAATGAGGACATAGTGTTTACAGATAATGGGTGGAATCACGTGGAGGTGTCATATGCGGATCATATAACAAACAACGAGGACTCTATAAGAGAGGTTGCTAAGTTTAGCGGAATCCATGTGCTATATGAACAAACATGTGGTCCAAGAGATGTCCAATTCCATCCTCCACAAACATTGATAAGTGTGAATTTTGATTCAAATTCAATGGAGAGACCACGGCAAAGAGTCAAGATTGTAACAGAGAGACCTCAGAAAAATCAGGCTATGGTGTTATCTTCATCCATTCTCACATTGACCCAACCTCCACCTGCTGATGCAGAAAAAGGCCTAGCCCGTCAACCAATACTTCTACCTATGAGTCCTTTGGAGGATGTGGTAGGAGAAACTTCAAAAAGTGTTAGAGAGGATGGAGAAGTTTATGATATTACAATTCAAAATGGGATTGAAAGATGTCATGAGAATGATGCTGTCCAACTGGAATCAGTATCCTCTTCCGAACTTCATTCTGAAGAGTCCCCTTTCAACACTAGAGGTTCCGACTCAGATGACCCCTTCGACCGAGTTGGTAGAAAACACTTTATTAGTGGCCTGGAAGTCATATCTCCTGGTGCGAAATCTGATGAGTCTTCTTCCAACACTAAAGGGTCACACTCAGATTATGTCATCAACTTAGTTGATAGAAAATCCTCTGTTAATGGCCATGTAACCTTACCTTCTAGGGCTGATTCTCTTGGATCAATCAAAGAGGCTATCAATGCCTTGGAGCTGTTAATGGTTAAGGACTTATCTGAAGTCTCTTCTGATCCTGCTACACAGTTTGGACTTCATCAGCTATTGGATGTATTGAGTAGAAGGACTGTTGAGGTACAAGAGGCTCTTGCAGAGTTCAAAAGAAAGGCAGTGACATCTTGCCAAGAATTCCAATCAACTGTTGAGTCTGTGAACAAACTGAAGAGTAATGAAAAGCATCTAGAAAGAATTCAGCAGGAGACTATCACAAGTAAGGATCGACGGAATGATCTCAAAAACTCAATAAAAGAGATTTCTTTGGTCATCAAGGCTGAAAATAAGAGGAAGAAGGAGCTAGAGGCAGAAATTGATAGTTTGAAAGAACAACTAGATGCCAAAGGAAGAGACCTTGAACAACTTTTGTTGAATCTCAAGAATAAGGAAGCAACACTCTCAGCATATTCAACCAATTGTGCTTCTCTGAACGATCAAGCTCAAAAGCTATTAGAAGAAGCTGATGTTCTACTTGCTGCTAAAGACGAGGGTGAAGCTGCCGAAGTAAAACAGAATAGGCTCAAGTCAACCTGGTCCTCTGACATAACTCTGCAGATTAGTAAAATCAAGCATAACATTTTTGGGTCAGTTCACAATGAATGTTGA 4491 0.3935 MAGRGSFNYDVFFSFRGEDTRLGFTGNLYSALSQRGIRSFFDDKEIRKGKEITPSLVKAIKESKVAIVVLSQNYAFSSFCLDELSIILECCEENKGQLVLPIFFNIDPSDVRHCRGKYGQALENLEERFKGDKEKPNKWRVALHKASNIAGFTFKNGNEYECDFIWRIFQDVSLKIKRKLLHVANYPVGLESRVDEVISRLKVGSDDVVHMVGVHGIGGIGKSTIARAVYNSIRHHFEGFCCFLENVRENSHKYGICHLQQMVLSDILGYEDFKLRYVSDGMAMIEQRLCSKKVLLVLDDVDKIEQLQAIAGAPNWFGLGSRVIITTRDHGLLKHHEVKSTYEVEELNDKEARELLCWNAFKTDKVDSRYIAILNRAVGYASRLPLALEVIGSNLHGQKEDVCTHTLDRYDRFPDKKIKDILKVSYDSLDEDERSVFLDIACFFNGHKLADVEDILSAHYHLSVEYSIKELIGKSLIKIDSGLVTLHDLIQKMGREIVRLESPHEPGKRSRLWFCEDVVQVLNENKGSSKTHILILDFPKDEAHMKGPKSEEVNWDGEAFKDMKNLKTLIIRNGSFSSGPTHLPNSLRVLKWQGYPLLSLPCYFHPKKLSILELPDSCLKPCEPIQAFSHLTILDFSNSESVTEIPDVSGVRNLEKLSFRCCEILTKVHDSVGRLGKLKILDASGCKNLKNFPPIILTSLEQLNLSHCSILESFPEILGKMEKITEIQIRGSPIKEYPFSIQNLIRLRKLELQMCGMVQLPSSIFMLPELSLMHVSKCEGLALSEQDKGNKMVLKSSNVDHLVLSNCNISNDFLPIGLSFFFNVKELNLSGNNFITLHAWIKECHLLRNLKMDDCSLLREIRGIPRNIEKISVKGCISLRFLDLTVLPECNAECCFLKELILDDCACLREITGLPPNLNSFSAKGCTSLTLQSISMLCNQEWVEAGNKKLFFPGKKIPKWFTHHTRGGSTSFWFCNKFPAISLCLVIGRGDEKHIKVKFSPRVCINGHKQSLGCQKIYEFMIATDHVLLLQFEDNEDIVFTDNGWNHVEVSYADHITNNEDSIREVAKFSGIHVLYEQTCGPRDVQFHPPQTLISVNFDSNSMERPRQRVKIVTERPQKNQAMVLSSSILTLTQPPPADAEKGLARQPILLPMSPLEDVVGETSKSVREDGEVYDITIQNGIERCHENDAVQLESVSSSELHSEESPFNTRGSDSDDPFDRVGRKHFISGLEVISPGAKSDESSSNTKGSHSDYVINLVDRKSSVNGHVTLPSRADSLGSIKEAINALELLMVKDLSEVSSDPATQFGLHQLLDVLSRRTVEVQEALAEFKRKAVTSCQEFQSTVESVNKLKSNEKHLERIQQETITSKDRRNDLKNSIKEISLVIKAENKRKKELEAEIDSLKEQLDAKGRDLEQLLLNLKNKEATLSAYSTNCASLNDQAQKLLEEADVLLAAKDEGEAAEVKQNRLKSTWSSDITLQISKIKHNIFGSVHNEC* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1323 1496 Coils Coil 1379 1455 - -
Mtr8g1323 1496 MobiDBLite consensus disorder prediction 1207 1221 - -
Mtr8g1323 1496 ProSiteProfiles TIR domain profile. 7 176 IPR000157 GO:0007165
Mtr8g1323 1496 Pfam C-JID domain 952 1078 IPR045344 -
Mtr8g1323 1496 PANTHER ARCHAEAL ATPASE 19 882 - -
Mtr8g1323 1496 PANTHER ARCHAEAL ATPASE 888 1051 - -
Mtr8g1323 1496 PRINTS Disease resistance protein signature 211 226 - -
Mtr8g1323 1496 PRINTS Disease resistance protein signature 288 302 - -
Mtr8g1323 1496 PRINTS Disease resistance protein signature 381 395 - -
Mtr8g1323 1496 PRINTS Disease resistance protein signature 673 689 - -
Mtr8g1323 1496 SMART till_3 8 149 IPR000157 GO:0007165
Mtr8g1323 1496 MobiDBLite consensus disorder prediction 1193 1221 - -
Mtr8g1323 1496 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Mtr8g1323 1496 SUPERFAMILY L domain-like 554 909 - -
Mtr8g1323 1496 Pfam NB-ARC domain 191 424 IPR002182 GO:0043531
Mtr8g1323 1496 Gene3D - 177 342 IPR027417 -
Mtr8g1323 1496 Pfam TIR domain 8 172 IPR000157 GO:0007165
Mtr8g1323 1496 Gene3D Ribonuclease Inhibitor 550 697 IPR032675 -
Mtr8g1323 1496 SUPERFAMILY "Winged helix" DNA-binding domain 416 522 IPR036390 -
Mtr8g1323 1496 Gene3D - 346 430 IPR042197 -
Mtr8g1323 1496 Gene3D Ribonuclease Inhibitor 698 927 IPR032675 -
Mtr8g1323 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Mtr8g1323 1496 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 888 1051 IPR044974 GO:0006952
Mtr8g1323 1496 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 882 IPR044974 GO:0006952
Mtr8g1323 1496 Gene3D - 7 176 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1323 Mtr-Chr8 16313077 16320397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1323 6 778 WRKY Transcription Factor Family AT4G12020 30.866 2.23e-77 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1323 - - mtr:MTR_8g042660 2952.93