Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1322 ATGGGTGTGCGACCTTCCTTCACTTACGATGTGTATATCAGCCACAGCGCTGAAGATACACGATTTAGTTTTACCAGAAATCTGTACAAAGCTCTGTGCGACAAAGGGATCGATACCTTCATTGATGATTCATCGCTTCGAATAGGAAGTGAGATCACTCCATCGCTTTTGAAGGCAATCCAAGAGTCCAGGATTGCCATCATTATATTTTCTGGGAACTATGCCTCTTCTATCTGGTGCTTGGAAGAACTCACAGCGATCCTTGAGTTGAAGAGAAACGGTCGCCTTGTTATACCAGTTTTTTATGACGTGGATCCTTCTCATTTGCGACACGGGACAGGAAGTTACGGTCTTGCACTCGCTAAGCACAAGGAGAGGTTCAAAGATGACATCCAGAAGGTCAACCGTTGGAGGACTGCTTTACACGAGGCGGCTAACATCTCCGGTCTTCACTTCCAGTTCCAGCATGGAGAATCTGAATTCATTGAGACTATTGTTAAGAAAGTCGGTAGCAAAGTTAATCGTGCTCCTTTACATGTTGCTAATTACCCTGTTGGATTGGAGTCTCGAGTGCACCAAGTAAACTCACTTTTGGATCTTGGTTCTGATGATGTAGTCCACATGTTAGGCATCTACGGTATCGGTGGAATTGGTAAAACTACAATTGCTAAAGCAGTATACAATTCAATCAGTGACCTGTTTGATGAGTTGTGTTTTCTCAAAGACATCAGAGAGAATTCAATGAAATATGGATTGGTACATCTCCAACAGACTATCCTTTCTGATATATGTCGTGATGGGGATATTGGCATTGGACATGTAAGTAAAGGAATTCCAATCATAAAGCAGAGGTTCAGCCGGAAAAAGGTTCTTTTGGTTCTTGACGATGTTGACAAAATGGAGCAGATTGAGGTTATTGTGGGAAGGCCTGATTGGTATGGTCCTGGTAGCAGAGTTATCATTACAACTCGGGACAAACAGTTGCTAGCAAGTCATGGGGTTGAAAGAACATATGAAGTGGATGCACTAAATGGAGAAAAATCTCTTTATTTGCTATGTTGGAATGCTTTCAAAACCGATAAAGTTGATGCAAGGTATGAAAACATTTTAAAGCGTGCATTGACTTTTGCCTCTGGGCTTCCATTAGCTTTACAAGTATTAGGCTCCTACTTGTTTGGCAAAAGCATAGAGGAAGGGATAAGTTCATTGCATCAGTATGAAAGAGTTGCTGGGAAACATATCCAAGCGGTACTCAAGATAAGCTATGATTCCTTGGAGAAAGAAGAACAGGGTATTTTTCTTGATATTGCTTGTTTCTTCAATGGATATAAGTTAAAAGACGTCAATGATATGCTTTTGGCTCGTTATGGTGAATCTGCAAAATATAGTATTGAAGAATTGATTGAAAAATCTCTCTTAAAGATTGATGATGGTCTTGTGACATTACATAACTTGATACGAGACATGGGCAGAGAAATTGTTCGACAGGAATCACCAAATGAGCCTGGCAAACGTAGTAGGTTATGGCTTCCCCAAGATGTAGTTGAGGTTTTAGAAACAAATTCGGGTTCTAGTACAATTGAAAGCTTATTTCTGAATTTCCCCAAAGATGAAGTGAACTCAAATAGATCCGAAGGTAAAAAAGTAAATTGGGATGGTGACGCTTTAAAGAAGATGCAAAACCTCAGAATGCTTGTTATTGAAAATGGTTGTTTTAACAAAGGCGCCTCACATCTTCCCAACAGTTTAAAGGTGTTGAAATGGCGGGGGTACCCTTCACCATCATTACCAAGTGATTTTCATCCAAAGAAGCTCGCCATACTCGAGTTACCTGCAAGTTGCATGGGGGTAATTGAACCAATCCAGGGGTTTATTAGTCTGAAGGATTTGAGTTTCAGAAACTGTGAACTGATAACTCGTATACCTGATGTATCTGGCCTCCCAAATTTAGAAAAATTGTCATTTAGAGACTGTGAGAAGTTATCTAAAGTTCATCCGTCAGTTGGATTTCTGGATAAACTTACATACTTGGATGCTTTTAATTGCAATAATCTGAAGACTTTTCCACCCATCATATTACCCTCTCTTCAACAGCTCAATCTTTCACATTGCTCAGCTCTTGAGAGTTTTCCGGAAATATTGGGGAAGATGGAAAACATAACAGAGCTTCGTATAATCGGAAGTCCAATAAAAGAATTGCCATCTTCAATTCAAAACCTAAATCGGCTTCGAAAATTAGAACTACAAATCTGTGGAATGGTTCAGTTACCAAGTAGCATTGCCATGTTTTCACAACTTTGTTTGGTGTGTGTTTCAGAATGCGAAGGATTGTGGTTATCTAAACAGGACATAGGTGAAGAATGGGAGACCAAGTCTTTAAAGACAGAACTTCTTACTCTGTCATACTGCAATTTATCAGATGATTTCCTTCCAACAGGTCTTACTTGGTTTGCCAATGTGAAAGATTTGGACTTATCGGGGAATAATTTCACTGTTCTTCACGCATGCATCAAAGAGTGTCACTTTCTGAGGAGCCTAAAGCTAGATGATTGCACGCTTATACAAGAAATTACAGTGATACCATGCAAATTAGAAAAACTTTCTGCGAAACGGTGCAAATCCTTGAAATACATAGACCTTACAGAAGAATGTCAATCTTTGAGAGAGCTTATTCTGGACGATTGTATTTATCTTCGAAAAATTAAAGGGGTTCTGCCAAACTTGGATCATTTCTCTGCACAAAACTGCACTTTATTGACTTCCCAGTGTGCAAGCTTGTTAGTAAATCAGGAAATGATTGAAGCTGGAAACAAGATGTTCTTTTTTCCAGGAACAAAGATTCCAGAGTGGTTCTCACACCGTACAAGTGGAGATTCAATATCTTTCTGGTTTCGTAACAAATTGCAATTCTCTGCAATTTGTATGTGTCTTGTTATTGGATTGGTGGATGAGCTACCTATCTCAGTCAAGTTTAGCCCCAAATTGTTCCTCAATGGCAACGAACTGTCCAACGGCAATCAGAGAGTCTACAAGTTCAGGATAGCTACTGATCATATACTTTTGTTTGACGAGCGGCCGCTAAAATTTGTGGATAACGGAGAAACAGTGTTTTCATGCAACAAGTGGAATCATTTCGAGGTTTCATACGAGGATCTTGTTACTGACAACGGGGTTCCAATCAGAGAGGTTGCCAAATATAGTGGAATCCATGTATCTCAAGAATGGATTGATATTGCGGATATCCAATTCACCCAATCCCGGAAAACATTGATAAATGCAAATTTGGATCCCAATTCAATGGTGGAGCCACTTCAAAGAGGAAAGATTATGACCAAGAGAAAGAGATCCGAGGAAGACCAGATCATTGTGCTGTCTCCCCCCTCACTCACATCAAAACAATCTCCTTCACCCTCTGAAATTGAAAAAGGCCTTGTCCCTCAACCTACATTTCCAGTTAAGATGCCTTTGGGAGATGTGGGAAGAGAAAGTTCGGAGAATCTTTCAGATAATGAAGCTTATGCTACTGCAATTCAAAATGACATTCCTCTCAATCAAAGATGTGGCAAGGGTGATGATGTCGAGCTGGAATTAGTATCCTGTGAAGAGGAGTCTTCTTCCAACACTAAAGGTTCTGACTCAGATGATCCCTTCGACTTAGTTAATAGAAAACTGCATGTTAGTGGCAAGAAAACCATATCTTCCGGGGCCAGTTTTGGAGATGCAAATCTAAGATCTATTAGAGAGACTATTAATGCCTTGGAGTTATTGATGATCAAGGACTTATCCGAAGTCTCTGCTGATCCTTCCGCACATTCCAAACTTCGTCAGCTCTTGGATCTATTGAGTGCAAGTAGCCACCCCAAGGTGACGGTAGAAATGAAGGGAGCTATTGCTGAGTTCAAGAGAAAGGTCTTTGCATCATTCCACGAATTCCAAGCCACTGTTGAATCTGTGAATAAGCTGAAGAATTATGAGAATCATCTGGCCAGAATTCAGCAGGAGACTGTGGCCGGCAAGTATCAATGGAAAGACTTAAAAAACTCAATAAAAAAGGTTTCGTCGTACATCAAGGCCGAAAATAGTAGGAAAAATGAGCTAGAGTCAGAAATTGCAACTTTAAGAAAACAGCTAGCTACCAAAGAAAAGGACCTCAAACAACTTGTGTTGAATCTCAATAATCAGGAGACAACACTCTCAACTTATTCAATGAGTTATGCTTCTCTCAACAAACATGCTCGAGCACTATCAGAAGAAGCTGATGATCTACTTGCTTCAAGCAGTGAGATAAAACATGATGGCGAAGCAGCTGAAGTTGAACAGAGTAGGCTCAAGTGGACATGGTCTATTGACCTAACTGGCCAGCTTAATAAGATGAAAGAAAACATTCTTGGCTTTTATGGGTAG 4404 0.4015 MGVRPSFTYDVYISHSAEDTRFSFTRNLYKALCDKGIDTFIDDSSLRIGSEITPSLLKAIQESRIAIIIFSGNYASSIWCLEELTAILELKRNGRLVIPVFYDVDPSHLRHGTGSYGLALAKHKERFKDDIQKVNRWRTALHEAANISGLHFQFQHGESEFIETIVKKVGSKVNRAPLHVANYPVGLESRVHQVNSLLDLGSDDVVHMLGIYGIGGIGKTTIAKAVYNSISDLFDELCFLKDIRENSMKYGLVHLQQTILSDICRDGDIGIGHVSKGIPIIKQRFSRKKVLLVLDDVDKMEQIEVIVGRPDWYGPGSRVIITTRDKQLLASHGVERTYEVDALNGEKSLYLLCWNAFKTDKVDARYENILKRALTFASGLPLALQVLGSYLFGKSIEEGISSLHQYERVAGKHIQAVLKISYDSLEKEEQGIFLDIACFFNGYKLKDVNDMLLARYGESAKYSIEELIEKSLLKIDDGLVTLHNLIRDMGREIVRQESPNEPGKRSRLWLPQDVVEVLETNSGSSTIESLFLNFPKDEVNSNRSEGKKVNWDGDALKKMQNLRMLVIENGCFNKGASHLPNSLKVLKWRGYPSPSLPSDFHPKKLAILELPASCMGVIEPIQGFISLKDLSFRNCELITRIPDVSGLPNLEKLSFRDCEKLSKVHPSVGFLDKLTYLDAFNCNNLKTFPPIILPSLQQLNLSHCSALESFPEILGKMENITELRIIGSPIKELPSSIQNLNRLRKLELQICGMVQLPSSIAMFSQLCLVCVSECEGLWLSKQDIGEEWETKSLKTELLTLSYCNLSDDFLPTGLTWFANVKDLDLSGNNFTVLHACIKECHFLRSLKLDDCTLIQEITVIPCKLEKLSAKRCKSLKYIDLTEECQSLRELILDDCIYLRKIKGVLPNLDHFSAQNCTLLTSQCASLLVNQEMIEAGNKMFFFPGTKIPEWFSHRTSGDSISFWFRNKLQFSAICMCLVIGLVDELPISVKFSPKLFLNGNELSNGNQRVYKFRIATDHILLFDERPLKFVDNGETVFSCNKWNHFEVSYEDLVTDNGVPIREVAKYSGIHVSQEWIDIADIQFTQSRKTLINANLDPNSMVEPLQRGKIMTKRKRSEEDQIIVLSPPSLTSKQSPSPSEIEKGLVPQPTFPVKMPLGDVGRESSENLSDNEAYATAIQNDIPLNQRCGKGDDVELELVSCEEESSSNTKGSDSDDPFDLVNRKLHVSGKKTISSGASFGDANLRSIRETINALELLMIKDLSEVSADPSAHSKLRQLLDLLSASSHPKVTVEMKGAIAEFKRKVFASFHEFQATVESVNKLKNYENHLARIQQETVAGKYQWKDLKNSIKKVSSYIKAENSRKNELESEIATLRKQLATKEKDLKQLVLNLNNQETTLSTYSMSYASLNKHARALSEEADDLLASSSEIKHDGEAAEVEQSRLKWTWSIDLTGQLNKMKENILGFYG* 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1322 1467 ProSiteProfiles TIR domain profile. 7 173 IPR000157 GO:0007165
Mtr8g1322 1467 Gene3D - 8 171 IPR035897 -
Mtr8g1322 1467 SUPERFAMILY L domain-like 482 918 - -
Mtr8g1322 1467 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 149 IPR035897 -
Mtr8g1322 1467 Gene3D Ribonuclease Inhibitor 518 709 IPR032675 -
Mtr8g1322 1467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 881 1049 IPR044974 GO:0006952
Mtr8g1322 1467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 876 IPR044974 GO:0006952
Mtr8g1322 1467 MobiDBLite consensus disorder prediction 1123 1140 - -
Mtr8g1322 1467 Pfam C-JID domain 942 1056 IPR045344 -
Mtr8g1322 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 436 IPR027417 -
Mtr8g1322 1467 Coils Coil 1356 1397 - -
Mtr8g1322 1467 Gene3D Ribonuclease Inhibitor 710 927 IPR032675 -
Mtr8g1322 1467 Gene3D - 172 336 IPR027417 -
Mtr8g1322 1467 Gene3D - 342 426 IPR042197 -
Mtr8g1322 1467 PRINTS Disease resistance protein signature 208 223 - -
Mtr8g1322 1467 PRINTS Disease resistance protein signature 284 298 - -
Mtr8g1322 1467 PRINTS Disease resistance protein signature 377 391 - -
Mtr8g1322 1467 PRINTS Disease resistance protein signature 691 707 - -
Mtr8g1322 1467 MobiDBLite consensus disorder prediction 1111 1168 - -
Mtr8g1322 1467 Pfam NB-ARC domain 190 405 IPR002182 GO:0043531
Mtr8g1322 1467 Pfam TIR domain 9 174 IPR000157 GO:0007165
Mtr8g1322 1467 PANTHER ARCHAEAL ATPASE 881 1049 - -
Mtr8g1322 1467 PANTHER ARCHAEAL ATPASE 21 876 - -
Mtr8g1322 1467 SMART till_3 8 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1322 Mtr-Chr8 16305524 16311694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1322 9 774 WRKY Transcription Factor Family AT4G12020 31.486 2.20e-85 307