Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1321 ATGGATGTGCAAGCTTTCTTCACCTACGATGTGTTCCTCAGTTTCAGAGGTTCAGATACGCGATATGGTGTAACGGGATATCTGTACAAAGCTCTGACTGACAAAGGGATCCGTACCTTCATTCATGATTCGGAGCTTCAAATAGGAGATGAGATCACTCCATCGCTTTTTAAGGCAATCGAAGAGTCTAGGATTTGTATAATTATATTTTCTACGAACTATGCCTCTTCTAGCTTTTGCTTGGATGAACTCACCGCAATCCTATACAGCTATGAGGAGGAGAGAAATGGTCGTGTGGTTTTTCCAGTGTTTTATCACGTGGAATCTTCTGTTATTCGACACGGGAGAGGAAGTTACGGTGACGCACTCGCTAAGCATGAGGAGCGGTTCATGAAGGATGGCGTGCATAGGGTCAAAAAATGGAGGACTTCGCTGTGCAAAGCGGCTAATCTCTCCGGCTATCATTTCACGGGGGACGGATATGAACATGAATTTATTGAGGCTATTGTTGAGTATGTCTGTAAACAAGTTACTCATGTTGTTCCTTTACATACTGCTGATGCTGATCAAGCTGTTGGAATTGAGCCTCGAGTGAACAACGTAAACTCACTTCTGGATCTTGGTTCTGATAATGTACTCCTATTAGGGATATATGGAATGGGTGGGATAGGCAAAACTACAATTGCTCGAGCTGTTTATGATTCAATCAGCGACCAGTTTGAAGGTCTGTGCTTTCTCAATAATGTTAGAGATGATTCAGATAAATTTGGCCCAATGCATCTCCAAGAGACCATGCTTTATGAGACATGTGGATTGAAGATTAAACTTGGAGGTGTGAATGAGGGAATTAGAATCATTAAGCAGAGGCTCAGCAAGAAAAAGGTTCTTTTGGTTCTTGATGATGTTAACAAATTGATGCAGCTAGAGGTTATTGCAGGAGCATACGATTGGTTTGGTCCTGGAAGCAGGATCATAATTACAACACGGGAACATCATTTGTTAGTAATGCATGGGGTTGATATAATATATGAGGTAGATGAATTAAGTGAAGGAGAATCTCTTGATTTGCTTTGTCGGAGTGCTTTCAAAACAAACAAAGTTGATCCAAGTTATGCAGACATTTTGAAACGTGTATTCACTTTTACCTCTGGGCTTCCATTAGCTTTGAGAGCAGTAGGCTCCTACTTGTTTGGCAGAAACATAAATGAATGGGAAAGTGCATTGGATCTGTATGAAAGAATTCCTCACAACGATATCCAAACAATACTCAGGATAAGCTTTGATTCCTTGGAGGAAGAAGAAAAGGATATATTTCTTGATATTGCTTGTTTCTTCAATGGAGATAAGTTAGAATACGTCGAAGATATACTTTTGGCTCGTTATGGTGTATCTGTGCGCTATAGTATTCGTGTATTGATTGAAAAATCTCTCATATACATTGATAAAGGTCTTGTGACATTACATAACCTGGTAGAAGACATGGGTAAAGAAATTGTCCGACAAGAATCACCAAAGGAGCCAGGCGAACGTAGTAGGTTATGGTTTGTCAATGATGTAGTTCAAGTTTTAGAAGACAATTCGGGATCTGCTGCAATTGAAATCTTATTTCTGGATTTTCCCATACATGCAATGAACTCAAATGGATCCAAAGGTGGAGAAGTAAATTGGGATGGAGAAGCTTTAAAGAACATGCGAAACCTCAAAACACTTGTTATTAGAAATGGAAGTTTTAACCAAGGCCCCACACATCTTCCCAATAGTTTAAGAGTGTTGGAATGGTGGGGGTATCCTTCACCATCATTACCAAATGATTTTCATCCAAAGAAACTTGCCATGCTCAAGTTACCTGAAAGTTGCCTAAGGATAAGTGAACCAATTCAGGGGGTCATAAATTTGACAGTTCTGGATTTCAGCTACAGTGATTGGATAACTCATATACCTGATGTATCTGGCCTCCAAAATTTAGAAAAAATATATTTTAAACAATGTGAAAACTTAACTCGAATTCACGAGTCAGTTGGACTGCTGGAAAAACTTAGAATATTGAATGTTGTTCATTGCAAGAAGCTCAGTGCTTTACCGCCCATCAGATTGACCTCTCTTGAACACCTCAATCTTTCACATTGCTCAGTTCTTGAGAGTTTCCCTGAAATATTGGGGAAGATGGAAAATCTAACAGAGCTTCATATAATGGGTAGTCCTATAAAAGAATTGCCTTATTCAATTCAAAACCTTATTCGGCTTCGAAAGTTAGAACTACACATCTGTGGAATGGTTCGGTTACCAAGTAGCATTGTTATGTTGCCAGAACTTAGTTTGATGTGTGTTTCGAAATGCCAAAGGTTGTGGTTTTCTGAACAGGACAAAGGTGAAGAATTGGAGTCCAAGTCATCAAAGACAGAGCATCTTACTCTGTCATATTGCAACATATCAGATGAGTTACTTCCAATAGGTCTTGCCTGGTTTGCCAATGTGAAAGATTTGAACCTATCAGGGAATAATTTTGAAACTCTTCATGCATGCATCAAAGAGTGTCCCTTTCTGAGGAACCTTAAAATGGATTATTGCGATAATATACAAGAAATTAAAGGGCTACCATGGAAATTAGAATCATTTTCTGCAAAAGGATGCACATCCTTGAAATACATGGACCTGGCAGGAGAAAGTCACTCTTTGAGAGAACTTATTCTAGATGATTGTGTGTTTCTTCGAGAAATTATAGGGGATCTTCCTAACTTGAATCATTTCTCTGCAAAAAACTGTGTATCATTGACTTCCCAATGTACAAGCATGTTAATGAATCAGGAATCGGTAGAAGCTGGAAACAAGATGTTTTCTTTGCCTGGGAAAAAGATACCGGATTGGTTTGCACTACAATCAAGGGAAGAGTCAACCGCTTTCTATTTTCGCAACAAATTCCCTGCAGTATCTGTGTGTCTTGTTATTGGACATCTGGATGAGAAACCTATCGCAGTTAATTTTAGCCCAAAAGTGTTTATCAATGGTAATAAACTATCCTCTGGCAATCAGTTTGTCTACAATTTCAGGGTAGCAACGGATCATATACTTTTATTCGATTTGCGGCTGTTAAAATTTGAAGATAATGGGGATGCATTGTTTTTAGACAATGAGTGGAATCATGTGGTGGTTTCATATGTGGATCATATTACTGACAATGAAGTTCCAATAAGAGTGGTTTCCAAATATAGCGGAATCCATGTATTTAACCAAATAAGTGGAATGGAAGATATCCGATTCACCATTCCCCAGAAAACATTGATAAATGCAACTTTGGATTCTACAAATTCAATGATGGTGCCATCTCAAAAAATCATGACAAAGAGACCCGAGGAAGACCAGACCGTGGTGCTGTCACCCACACTCAAATCAATCCAATCTCCCTCTCCAACTTCTGAAGTCGTAAAAGGCCTTGTCCCTCTACCCACATTTCCAGTTAAGAGGCCTTTGCCAGATGTGGGAGAAGAAATTTCAGAGAATCTTTCAGATGAAGAAGTTTGTGTTACTGCAATTCAAAAAGACCTTCCAGTCATTCAAAGATGTAGTGAAGGCGATGACGTCGAGCTGGAATCCATATCCTGTGAAGAAAAGTATTCTTCAAACACTGAAGGTTCTGACTCAGATGATCCCTTCGACTTGGTTAATAGAAAACTGTATGACAGTGGCATGGCAACCATATCTTCTGGGGAAAGATCTGGAGATGCATCTATGAGATCAATTAGAGAGGCTATTAATGGCTTGGAGCTGTTAATGGTTAACGACTTATCCGAAGTCTCTTCTGATCCCGCCAAACTGTCCGAACTTCATCAGTTGTTGGATCTACTGAGTACAAGTAGCCACCCCAAGGTGACTGTAGAGGTGAAGGAGGCTATTGTAGAGTTCAAGAAAAATGTCTTTTTATCATTCCAAGAATTCCAATCTGCTGCTGAGTCTGTCAACAAACTGAAGAATTTTGAAAGGCAGCTGGCCGTAATTCAGCAGAAGACTATGGAAGGCAAGGGTCAAAGAACGGACCTCAAAAACACAATAAAAAAGGTTTCTTTGGCCATGACAGCTGAAATTAGTAGGAAGAAGGAGCTAGAGGCAGAGAATGCAACTTTAAGGATACAGCTAGATACCAATGAAAGGGAACTTGAACAAGTTGTGCTGAATCTCAAGAATCAGGAGGAAATACTCTCAACCTATTCAACGAGTTGTGCTTCTCTCAACGAGCAAGCTCGAGCACTATTAAAACAAACTGATGATCTACTTGCAGCAAGCAGTGGGATCAAGCAAGATGGTGAAGCGGCTGAATTAAAGCAAAGTAGAATCAAGTTGACCTGGTCTATTGACCTAACTAGCCAGCTTAACAAAATGAAAAAAACCATTCTTGGCTTTTTTGAGTAA 4404 0.3955 MDVQAFFTYDVFLSFRGSDTRYGVTGYLYKALTDKGIRTFIHDSELQIGDEITPSLFKAIEESRICIIIFSTNYASSSFCLDELTAILYSYEEERNGRVVFPVFYHVESSVIRHGRGSYGDALAKHEERFMKDGVHRVKKWRTSLCKAANLSGYHFTGDGYEHEFIEAIVEYVCKQVTHVVPLHTADADQAVGIEPRVNNVNSLLDLGSDNVLLLGIYGMGGIGKTTIARAVYDSISDQFEGLCFLNNVRDDSDKFGPMHLQETMLYETCGLKIKLGGVNEGIRIIKQRLSKKKVLLVLDDVNKLMQLEVIAGAYDWFGPGSRIIITTREHHLLVMHGVDIIYEVDELSEGESLDLLCRSAFKTNKVDPSYADILKRVFTFTSGLPLALRAVGSYLFGRNINEWESALDLYERIPHNDIQTILRISFDSLEEEEKDIFLDIACFFNGDKLEYVEDILLARYGVSVRYSIRVLIEKSLIYIDKGLVTLHNLVEDMGKEIVRQESPKEPGERSRLWFVNDVVQVLEDNSGSAAIEILFLDFPIHAMNSNGSKGGEVNWDGEALKNMRNLKTLVIRNGSFNQGPTHLPNSLRVLEWWGYPSPSLPNDFHPKKLAMLKLPESCLRISEPIQGVINLTVLDFSYSDWITHIPDVSGLQNLEKIYFKQCENLTRIHESVGLLEKLRILNVVHCKKLSALPPIRLTSLEHLNLSHCSVLESFPEILGKMENLTELHIMGSPIKELPYSIQNLIRLRKLELHICGMVRLPSSIVMLPELSLMCVSKCQRLWFSEQDKGEELESKSSKTEHLTLSYCNISDELLPIGLAWFANVKDLNLSGNNFETLHACIKECPFLRNLKMDYCDNIQEIKGLPWKLESFSAKGCTSLKYMDLAGESHSLRELILDDCVFLREIIGDLPNLNHFSAKNCVSLTSQCTSMLMNQESVEAGNKMFSLPGKKIPDWFALQSREESTAFYFRNKFPAVSVCLVIGHLDEKPIAVNFSPKVFINGNKLSSGNQFVYNFRVATDHILLFDLRLLKFEDNGDALFLDNEWNHVVVSYVDHITDNEVPIRVVSKYSGIHVFNQISGMEDIRFTIPQKTLINATLDSTNSMMVPSQKIMTKRPEEDQTVVLSPTLKSIQSPSPTSEVVKGLVPLPTFPVKRPLPDVGEEISENLSDEEVCVTAIQKDLPVIQRCSEGDDVELESISCEEKYSSNTEGSDSDDPFDLVNRKLYDSGMATISSGERSGDASMRSIREAINGLELLMVNDLSEVSSDPAKLSELHQLLDLLSTSSHPKVTVEVKEAIVEFKKNVFLSFQEFQSAAESVNKLKNFERQLAVIQQKTMEGKGQRTDLKNTIKKVSLAMTAEISRKKELEAENATLRIQLDTNERELEQVVLNLKNQEEILSTYSTSCASLNEQARALLKQTDDLLAASSGIKQDGEAAELKQSRIKLTWSIDLTSQLNKMKKTILGFFE* 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1321 1467 Pfam TIR domain 9 192 IPR000157 GO:0007165
Mtr8g1321 1467 Gene3D - 5 178 IPR035897 -
Mtr8g1321 1467 SUPERFAMILY "Winged helix" DNA-binding domain 418 524 IPR036390 -
Mtr8g1321 1467 Gene3D - 179 341 IPR027417 -
Mtr8g1321 1467 Gene3D - 347 431 IPR042197 -
Mtr8g1321 1467 PRINTS Disease resistance protein signature 214 229 - -
Mtr8g1321 1467 PRINTS Disease resistance protein signature 289 303 - -
Mtr8g1321 1467 PRINTS Disease resistance protein signature 382 396 - -
Mtr8g1321 1467 PRINTS Disease resistance protein signature 696 712 - -
Mtr8g1321 1467 SUPERFAMILY L domain-like 554 922 - -
Mtr8g1321 1467 Gene3D Ribonuclease Inhibitor 720 957 IPR032675 -
Mtr8g1321 1467 Coils Coil 1356 1397 - -
Mtr8g1321 1467 Coils Coil 1314 1334 - -
Mtr8g1321 1467 Gene3D Ribonuclease Inhibitor 555 719 IPR032675 -
Mtr8g1321 1467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 882 IPR044974 GO:0006952
Mtr8g1321 1467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 887 1052 IPR044974 GO:0006952
Mtr8g1321 1467 Pfam NB-ARC domain 198 413 IPR002182 GO:0043531
Mtr8g1321 1467 ProSiteProfiles TIR domain profile. 7 177 IPR000157 GO:0007165
Mtr8g1321 1467 SMART till_3 8 151 IPR000157 GO:0007165
Mtr8g1321 1467 PANTHER ARCHAEAL ATPASE 887 1052 - -
Mtr8g1321 1467 PANTHER ARCHAEAL ATPASE 19 882 - -
Mtr8g1321 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 441 IPR027417 -
Mtr8g1321 1467 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 154 IPR035897 -
Mtr8g1321 1467 CDD AAA 192 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1321 Mtr-Chr8 16278140 16283838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1321 9 779 WRKY Transcription Factor Family AT4G12020 32.025 7.48e-89 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1321 - - mtr:MTR_8g042660 1507.66