Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1320 ATGCCTGGCCGAGCTTCCTTTAACTACGATGTGTTCCTCAGCTTCAGAGGTGAAGATACGAGATATAATTTTACGGGAAATCTGTACAATGCTCTGAATCAAAGAGGAATCCACACATTCTTTGACGACAAGGAGATTCGAAAAGGAGAGGAAATCACTCAAAAACTTCTCAAGTCAATTGAAGAATCTAGAATCTCTATCGTTGTGCTGTCTAAGCACTATGCTTTTTCTTCCTTTTGTTTGAAGGAACTCACCGCGATCCTCGAGTGCTATGAGAAGAACAAAACTAATCGTTTGTTTTTACCGGTTTTTTATGACGTGGATCCTTCTGATGTCCGACACTGCCGAGGTAGTTTTGCAGAAGGAATGGCTAAGCAGGAGGAGAGATTCAAGAATGACATGGAGTTGGTCGACAAGTGGAGGACTTCACTACACAAGGCAGCACTTGAGAAGACGGCTGAAATTGCCGGCTACACTTTCAAAATCGGGGATGGGTATGAGTATCTTTTGATTGAGCGTATCCTTAAGGAAGTTTCCCAAAAGATTAATCGTAGACTTTTACATGTTGCAAATTATCCAGTTGGATTGAAGTCTCGAATGGATAAAGTAAAGTCACATCTGAATCTTGGGTCTGATGACGTAGTCCACATGATAGGTATATGGGGAACTGGTGGTATAGGAAAAAGTACAATTGCCCGAGCAGTATATAATTCCATTAGTGATCAATTTGATGGTTTCTGTTGTTTTCTCGAAAATGTGAGAGAGAATTCAGAAAAATATGGCTTAGTACATCTCCAAGAGAGGGTTCTCTCAGAGATATTCAGAGACGAGATCACGTTGGGAAACTTGAGTAATGGAAAGTCAACAATGGAGAGTAGGCTCTGTGGTAAAAAGGTTCTTTTGGTTCTGGATGATGTTGACCAAACGGGACAGTTGCAGGCTATTGTTGGAGAACCTAATTGGTTGTGTTTGGGTAGCAGAGTTATCATTACAACACGCAACAGCGGCTTACTAAGGAAACACAATGTTAATATAACATATGATGTGGAGGAGTTGAGTGAAAATGAAGCTCGTCAATTGCTTACTTGGAATGCTTTCAAAGTTGACAAAGCTGATACAAGGTATACCACCATTTTAGACCGTGCAATGGGTTATGCTTCCAGGCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTAAAAAAGGGGAAGAAGAATGCATGCGTACATTAGATCAGTATGACAAACATACAGATAAAGAGATCGATGACATTCTTAAAGTAAGCTATGTTTCCTTGGATGAAGATGAGAAGAAAGTTTTTCTTGACATTGCTTGCTGTTTCGAAGGATGTAAATTGTCTGATGTTGAAAATATACTACATGCTCATCATGGTTCACCTATGAGACTTAGTATTGAATCATTGATTGAAAAGTCTCTCATAAAAATTGACGATTATCTTGTGACATTACATCAATTGATACGAGACATGGGCAGAGACATCGTGCGGCAAGAATCACAAGAGCCTGCGGAACGTAGTAGGTTATGGTTTTGGGAAGAAGTAGTCCAAGTTTTAGAACAAAAGAAAGGAACTAGCAATATTCATATCTTAATTCTGGATTTTCCCAAAGATGAAGCACACTTGCAAGGACCCAATGGCGAAGTAGTGAATTGGGATGGAGAGGCCTTCAAGAAGATGGACAAACTCAAAACACTTATTATTCGAAATGGTCATTTTTCCACAGGCCCCACACATCTTCCAGATAGTTTAAGAGTTTTGAAATGGCAAGGATATCATTCACCATCTTTACCATGTTATTTTTATCCAATGAAACTTTCCGTACTTGAGTTGCCTGATAGCCATTTAGAGTCATGTGAACCAATCCAGGCATTCACAAATTTGAGAATTTTGAATTTGAGCAACAGTGAATCTATAACTCACATACCTGATGTATCTCGTGTCGAAAATTTAGAAACACTGTCATTTAGAGATTGTGTGAATTTAACTGAAATTGATGAATCAGTTGGACGTCTGGGGCACCTTAAGATATTGGATGCTTCTGGTTGCAAGAATCTGAAAACTTTTCCGCCCATCATATTGACCTCTCTTGAACAGCTCAATCTTTCACACTGTTCAATTCTGGAGAGGTTCCCAGAAATATTAGGGAAGATGGAACAAATAACTGAACTTCGTATAACTGGGAGTTTCATAAAAAGATATCCATTTTCAATTCAAAAGCTTGCTCGGCTTCAAAAGTTGAAACTGCAAATGTGTGGAATGGTTCAGTTACCTAGTAGCATTTTCATGTTGCCAGAACTAAGTTTGATGCATATTTCTGAGTGTCAAGGATTGGTTTTATCTGAAGAAGACAAAAGTAAAGAAATGGCATCCAAGTCTTCAAATGTGGATCATCTTGTTCTCTCAGACTGCAATATATCCACTGACTTCCTTCCAAAAGGTCTTACTCATTTTTCTAATGTGAAAGATTTAAACCTATCGAAGAATAATTTCACAACTCTTCATGCATGGATCAAAGACTGTCACTTTTTGAGGAATCTTACGCTGGATGATTGCAACCAACTACAAGAAATTAAAGGGATTCCAAGGAAATTAGAAAAACTTTCTTTGAAAGGATGCAAATTCTTGAGATGCTTAGACCTCGCAGTTCTTCCTGATTGCACTGCTGAATGTTGCTCTTTGAAGGAACTGATTTTGGATGATTGTAGGTGTCTTTTAGAAATTAAGGGGCTTCCTAAAAACTTGGATAATTTCTCTGCAAAAAGCTGCACATCCTTGACTTCCCATAGTATGAACATGTTATTTAATAAGGAATGGGTAGAGGCTGGAAACAAAATGTTTGTTTTCCCAGGAAAAAAAATTCCAGAATGGTTTTCGCATAGTGCAAGAGGAGGGTCAATGTCTTTCTGGTTTTGCAACAAATTCCCTGCCATTTCTCTGTGCCTTGTTATAGAACTGGCAGATGAGCAATCTATCGAGCTCAAGTTCAGGCCCAAAGTATTCATCAATAATATACAGTCCCCTGTATGCCAGAGAGTTTACGAGTTCATGATAGAAACTGATCATATACTTTTGCTGAAGTTTGAAGATGTGGACATAGTGTTTGAAGATGATAAGTGGTATCGTGTGGACGTTTAA 3159 0.3862 MPGRASFNYDVFLSFRGEDTRYNFTGNLYNALNQRGIHTFFDDKEIRKGEEITQKLLKSIEESRISIVVLSKHYAFSSFCLKELTAILECYEKNKTNRLFLPVFYDVDPSDVRHCRGSFAEGMAKQEERFKNDMELVDKWRTSLHKAALEKTAEIAGYTFKIGDGYEYLLIERILKEVSQKINRRLLHVANYPVGLKSRMDKVKSHLNLGSDDVVHMIGIWGTGGIGKSTIARAVYNSISDQFDGFCCFLENVRENSEKYGLVHLQERVLSEIFRDEITLGNLSNGKSTMESRLCGKKVLLVLDDVDQTGQLQAIVGEPNWLCLGSRVIITTRNSGLLRKHNVNITYDVEELSENEARQLLTWNAFKVDKADTRYTTILDRAMGYASRLPLALEVIGSNLFKKGEEECMRTLDQYDKHTDKEIDDILKVSYVSLDEDEKKVFLDIACCFEGCKLSDVENILHAHHGSPMRLSIESLIEKSLIKIDDYLVTLHQLIRDMGRDIVRQESQEPAERSRLWFWEEVVQVLEQKKGTSNIHILILDFPKDEAHLQGPNGEVVNWDGEAFKKMDKLKTLIIRNGHFSTGPTHLPDSLRVLKWQGYHSPSLPCYFYPMKLSVLELPDSHLESCEPIQAFTNLRILNLSNSESITHIPDVSRVENLETLSFRDCVNLTEIDESVGRLGHLKILDASGCKNLKTFPPIILTSLEQLNLSHCSILERFPEILGKMEQITELRITGSFIKRYPFSIQKLARLQKLKLQMCGMVQLPSSIFMLPELSLMHISECQGLVLSEEDKSKEMASKSSNVDHLVLSDCNISTDFLPKGLTHFSNVKDLNLSKNNFTTLHAWIKDCHFLRNLTLDDCNQLQEIKGIPRKLEKLSLKGCKFLRCLDLAVLPDCTAECCSLKELILDDCRCLLEIKGLPKNLDNFSAKSCTSLTSHSMNMLFNKEWVEAGNKMFVFPGKKIPEWFSHSARGGSMSFWFCNKFPAISLCLVIELADEQSIELKFRPKVFINNIQSPVCQRVYEFMIETDHILLLKFEDVDIVFEDDKWYRVDV* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1320 1052 Gene3D Ribonuclease Inhibitor 525 718 IPR032675 -
Mtr8g1320 1052 PRINTS Disease resistance protein signature 217 232 - -
Mtr8g1320 1052 PRINTS Disease resistance protein signature 293 307 - -
Mtr8g1320 1052 PRINTS Disease resistance protein signature 386 400 - -
Mtr8g1320 1052 PRINTS Disease resistance protein signature 677 693 - -
Mtr8g1320 1052 Pfam TIR domain 8 155 IPR000157 GO:0007165
Mtr8g1320 1052 Gene3D - 351 435 IPR042197 -
Mtr8g1320 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 886 IPR044974 GO:0006952
Mtr8g1320 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 893 994 IPR044974 GO:0006952
Mtr8g1320 1052 Gene3D - 3 180 IPR035897 -
Mtr8g1320 1052 SUPERFAMILY L domain-like 492 919 - -
Mtr8g1320 1052 PANTHER ARCHAEAL ATPASE 19 886 - -
Mtr8g1320 1052 PANTHER ARCHAEAL ATPASE 893 994 - -
Mtr8g1320 1052 Gene3D Ribonuclease Inhibitor 719 946 IPR032675 -
Mtr8g1320 1052 ProSiteProfiles TIR domain profile. 7 182 IPR000157 GO:0007165
Mtr8g1320 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 445 IPR027417 -
Mtr8g1320 1052 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 146 IPR035897 -
Mtr8g1320 1052 SMART till_3 8 150 IPR000157 GO:0007165
Mtr8g1320 1052 Gene3D - 181 346 IPR027417 -
Mtr8g1320 1052 Pfam NB-ARC domain 198 421 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1320 Mtr-Chr8 16260055 16265901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1320 5 785 WRKY Transcription Factor Family AT4G12020 30.221 1.77e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1320 - - mtr:MTR_8g042440 2105.49