Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1316 ATGCTCTGCATATGCTTCAAATTTAAAGGAAAGATGAATCAAGAGGTTAATAACATTCAAAGCCCAAGTGCAAGGACTGTAGCAAGTGGAGGAGTTAATGAGCAAGGAGAGCATTCTGGTGCAGCAGCATCAACTCAAACTATGAATAATGAAGCTGGTGCAGCGCCATCAACTCAGGTTGCTGGACCTGAACTAACTAATACTCAACCATTAAAGAAGAGAAAGGCTAATGCAAATGGTCCTAGGCAAACAGCGGCTTGCTGGGAACACTTTATAAGGTTACCTGATAGTGAGGTTGACAAACCAACTGCTGCTTGTAAACATTGTCACCAAAGATACCTGTGTGACCCTAAGACTCATGGTACCAAAAACTTGAACACACATATAACTAAATGTCTTATCCTTCAATGTTTTTTAAAAAATGGCCCCAACCAAACCATTCTTTCATATCCAGCTGTTGAGGGTTCTAGTTTGGTTCCGGTTAGCTCTAGATTTAACCAGCTTGCTTGTAGGAAGTCTTTGGCAGTTTATATAGTTTTAGATGAGAAGCCATTTAGGACAGTTGAGGGAGAAGGATTTAAACACTACAGTAATACGATGCAACCTTTGTTTATTATTCCTTCTAGGAGGACAATTGCCAGGGATTGTTTTCAGTTGTACTTGGATGAAAAACTAAAATTAAAAGCTTTCTTTAAGTCTGACTGCAATAGGGTAGCACTTACTACCGATTGTTGGACCTCTCTTCAAAACCTTAACTACTTGACCCTTACGGCACATTTTGTGGATAATGATTGGAAGTATCAAAAAAGAATAATCAGCTTCGCTGTAATCCCAAACCACAAGGGTGAGACTGTAGGTAGGAAGATTGAAGAGGTGTTAAGGGATTGGGGGATTAGATGTGTGTCATCTGTAACTGTTGATAATGCATCAGCTAATGATGTAGCCGTGACATATTTGAAAAAAAAGATTAAAACAATGAATGGGCTGATGGGGGATGGGTCTTATTTCCATATGAGGTGTTGTTCACATATCTTGAACTTGGTGGTTTTGGATGGTTTGAAAGAAAAACATACCTCCATTACTCGTGTCAGAGATGCTGTTAGGTTTGTAAAATCTTCTCCTCAAAGGGCTGCCAAGTTCAAAGAGTGTATCGAATTTGCTGGAATAACATCTAAAAAACTAGTGTCTCTTGATGTTTCAACTCGTTGGAACGCAACATTGTTTATGCTGAGTAGTGCTGTAAAGTTTCAAGTAGCTTTTGAAAAGCTTGAAGACGAAGATTCTAGTTATAGGGAATACTTTGGACCTGCTGGTCCACCAACGAGTGATGATTGGGAGAATGCAAGGGCTTTTTGTGTTTTTTTGGAGATGTTTTATGAGGCAACAAAATTGTTTTCAACCTCCCAACATGTGAGTATACATACAGCCTTTCACCAAATTTCCTCAATTTATGTTGAGCTGAAGCGTGCCACAATGGACTTAAACTCAATTTTTGCAAGTGTGGGTATGGAAATGATGGCTAAGTACAACAAATATTGGGAGAACGTTGCTAACATGAACAATCTTTTGTATTTTGGCACCATCTTTGACCCGCGATACAAGTTGAGATATATTGAGTGGGTTTTTAATAATGAAATGTATTATGATAGACCTGTGTTTGCCAAAGAGTTGGTTAAATCTATTAGGGAGAATCTAGATAAATTGTACTTTTGGTATAAGAAAGCTCATGACCAGACTGTCAACAATGCACAACCACTTGCGAGTTGTAGAGAAACAATTACCCATGTTGAAACCAATACAGCTGTTGCTGCCCGCCGCCCTTCGGGTATGGCAAGGGCCAATGCTTTTGACCAACATTTGGAGGAGCAAAACTCAATTGACCTACAGAATGAGCTTGATGGGTATATTAACAGCAAGTGTGTCAAGCGAACTGATAATTTTGACATTCTTGTGTGGTGGAAAAATAATTCAAGTCAATACCCCATTTTATCTACCATGGCAAAGGATATTTTGGCCATACCGGTGTCTACAGTTGCTTCAGAAAGTGCTTTCAGCACAGGGGGGAGAGTCATAGAAACCTACAGGACCTCTCTAAAGGAAGAAATGGCAGAGGCATTAATCTGTACCCAAAATTGGTTGAAACCGTCGTTCACTTACTTTAAAGACTTGCAACTTATGGAGGAGACTGAGCTTTCTGAAGACATCATAGCAGAGTTTCAAAAAATATCTGTTGGAGAAGGATCTGCAAATGCAGCTGCTGCTGGTTGCTCATCATCACAGCCACCTGGCTGTGTATGA 2298 0.3977 MLCICFKFKGKMNQEVNNIQSPSARTVASGGVNEQGEHSGAAASTQTMNNEAGAAPSTQVAGPELTNTQPLKKRKANANGPRQTAACWEHFIRLPDSEVDKPTAACKHCHQRYLCDPKTHGTKNLNTHITKCLILQCFLKNGPNQTILSYPAVEGSSLVPVSSRFNQLACRKSLAVYIVLDEKPFRTVEGEGFKHYSNTMQPLFIIPSRRTIARDCFQLYLDEKLKLKAFFKSDCNRVALTTDCWTSLQNLNYLTLTAHFVDNDWKYQKRIISFAVIPNHKGETVGRKIEEVLRDWGIRCVSSVTVDNASANDVAVTYLKKKIKTMNGLMGDGSYFHMRCCSHILNLVVLDGLKEKHTSITRVRDAVRFVKSSPQRAAKFKECIEFAGITSKKLVSLDVSTRWNATLFMLSSAVKFQVAFEKLEDEDSSYREYFGPAGPPTSDDWENARAFCVFLEMFYEATKLFSTSQHVSIHTAFHQISSIYVELKRATMDLNSIFASVGMEMMAKYNKYWENVANMNNLLYFGTIFDPRYKLRYIEWVFNNEMYYDRPVFAKELVKSIRENLDKLYFWYKKAHDQTVNNAQPLASCRETITHVETNTAVAARRPSGMARANAFDQHLEEQNSIDLQNELDGYINSKCVKRTDNFDILVWWKNNSSQYPILSTMAKDILAIPVSTVASESAFSTGGRVIETYRTSLKEEMAEALICTQNWLKPSFTYFKDLQLMEETELSEDIIAEFQKISVGEGSANAAAAGCSSSQPPGCV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1316 765 Pfam Domain of unknown function (DUF4413) 466 570 IPR025525 GO:0003677
Mtr8g1316 765 SUPERFAMILY Ribonuclease H-like 226 714 IPR012337 -
Mtr8g1316 765 SMART bed5 82 135 - -
Mtr8g1316 765 SUPERFAMILY Hermes dimerisation domain 170 222 - -
Mtr8g1316 765 Pfam hAT family C-terminal dimerisation region 631 713 IPR008906 GO:0046983
Mtr8g1316 765 PANTHER OS01G0698300 PROTEIN 77 724 - -
Mtr8g1316 765 MobiDBLite consensus disorder prediction 25 79 - -
Mtr8g1316 765 PANTHER BED FINGER-RELATED 77 724 IPR045259 -
Mtr8g1316 765 MobiDBLite consensus disorder prediction 25 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1316 Mtr-Chr8 16213572 16219514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1316 - - cam:105851735 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1316 8 16213572 16219514 Mtr8g1316 8 16213572 16219514 ECH