Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1305 ATGAAAACGTCACCACACAACATGACTTATACTACAAGGTTTCTAAGCTTCATTCTCCTTAATCTCCTCCTCTTCATGATCCTAACAACTGCACAATCACCATTTTATATGTATAGTGTTTGCGAGAATTCAACTCAAAAAATACTCAACGCTTCGTACCAATCCAACGTTAACAACTTTCTGTCATGGACAACATCGGATTCTGCCAAACAAACAGTATCTAACCACAACACCATAGTTAGCAACAACAACAATGATCATGATACGGTTTATGGGTTCTATGATTGTCGGGGTGACATCACAGGAAGTTTCTGTCAATTTTGTATCAACACTGTTGTTAGAGATATTGCAAAATATTGTCCCAACAGTGTCTCAGCTATGATATGGTATGATTTATGCATCATGGGTTACACTAACCAGAATCCCTCGGGAAGAGTTATTGTAACTCCATCATGGAATGTAACCGGATCTAAAATCGTTAAAGACTCGACAGAACTTGCGAAATCTGAGAATAACATGATGAGTTTGATACGAAAAGTGACGACAGAAGGCAATCCCAATTGGGCAATGGGTGAGTTCAATTGGAGTGACACTGAGAAAAGGTATGGTATGGTGCAGTGTAATAGAGACCTTAGTAAGGATGGGTGTAGACAGTGTTTGGAGGCTATGTTGGATAGAGTTCCACAGTGCTGTGGAACAAAGGTTGGATGGGTAGTTGTGTCTCCTAGTTGTGGGATGAAGATTGATGATTATAATTTCTACGGACAACAAACAGGATCTCCTTCTCCTTTGCCAAATCCAGGCAAGCAGGAAGGATCAAGTAAAACTAAAACCTTAATCATCATCTTAGTAACTGTACCTTTGGCAGTAGCTCTACTAAGCTGTTGTGTCTACTATTGCTGGAGAAAGAATGGGTTAGGTAAAGGTGGATTTTTCTTGAGGACCACTACTCCTATAGCTTTCCGTGATAATGTTCAAGAAGAGGAATTGTTGAATGCGGACCTTCCGACGATCCCCTTAACTGTAATTCAACAGGCCACAAATAACTTTTCAGAGTCGTCTAAATTAGGAGAAGGCGGATTTGGCCCTGTCTACAAGGGTACTTTACCAAATGGCACAGAAGTTGCTGTCAAAAGGCATGCAGAGATGTCAGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTAATCTTCATAGCTAAACTGCAACACAGAAACTGA 1218 0.4039 MKTSPHNMTYTTRFLSFILLNLLLFMILTTAQSPFYMYSVCENSTQKILNASYQSNVNNFLSWTTSDSAKQTVSNHNTIVSNNNNDHDTVYGFYDCRGDITGSFCQFCINTVVRDIAKYCPNSVSAMIWYDLCIMGYTNQNPSGRVIVTPSWNVTGSKIVKDSTELAKSENNMMSLIRKVTTEGNPNWAMGEFNWSDTEKRYGMVQCNRDLSKDGCRQCLEAMLDRVPQCCGTKVGWVVVSPSCGMKIDDYNFYGQQTGSPSPLPNPGKQEGSSKTKTLIIILVTVPLAVALLSCCVYYCWRKNGLGKGGFFLRTTTPIAFRDNVQEEELLNADLPTIPLTVIQQATNNFSESSKLGEGGFGPVYKGTLPNGTEVAVKRHAEMSGQGLEEFKNEVIFIAKLQHRN* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1305 405 ProSiteProfiles Gnk2-homologous domain profile. 148 253 IPR002902 -
Mtr8g1305 405 SUPERFAMILY Protein kinase-like (PK-like) 333 405 IPR011009 -
Mtr8g1305 405 Gene3D - 34 141 IPR038408 -
Mtr8g1305 405 Gene3D - 150 253 IPR038408 -
Mtr8g1305 405 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 405 - -
Mtr8g1305 405 ProSiteProfiles Protein kinase domain profile. 350 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1305 405 ProSiteProfiles Gnk2-homologous domain profile. 35 142 IPR002902 -
Mtr8g1305 405 Pfam Salt stress response/antifungal 41 139 IPR002902 -
Mtr8g1305 405 Pfam Salt stress response/antifungal 170 250 IPR002902 -
Mtr8g1305 405 PANTHER PROTEIN KINASE DOMAIN 26 405 - -
Mtr8g1305 405 Gene3D Phosphorylase Kinase; domain 1 316 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1305 Mtr-Chr8 16020481 16023005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1305 16 405 Receptor kinase-like Gene Family AT4G05200 32.847 1.06e-67 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr8g1305 Stress-antifung 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1305 - - mtr:MTR_8g041870 779.245