Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g1290 | ATGAGAGCAACCATTTATATTCTTCCCTTCTTAGTCTTCTTCTTCTTCTTCTTCGCTCTCTTCATTGTTCTAGAATCTTCCGGTGACTGCTCCGATTTCGATCACGCGCAAATGGCCACTCCACTCGGAGGTATTCAGGATTCCCCCAGCTCTGAAAATTCTCTCGAAATTGAATCTCTTGCTCGATTCGCTGTTGATCAACACAACGCCAAACAGAATTCACTTCTGGAGTTCGCAAGGGTGGTGAAAGCACGGGAACAGGTTGTTGCTGGTACACTGCATCATCTTACTCTTGAGGCTATTGATGCGGGTGAGAAGAAGATCTATGAAGCCAAAGTCTGGGTAAAACCCTGGATGAACTTTAAAGAACTTACAGAGTTCAAGCATGCTGGTGATGGTCATGCACCATCATTTACCACTTCAGATCTTGGTGTGATAAAGGATGGCCACAAGCCAGGGTGGCAGTCTGTTCCAGCACATGATCCTCAAGTTCAGGATGCAGCAAATCATGCTATTAAGACCATCCAGCAGAGGTCCAATTCACTAGTGCCCTATGAGCTCCATGAGGTTACTGATGCAAAGGCTGAGGTCATTGATGATACTGCCAAGTTTAACTTGCTTCTCAAGGTCAAGCGGGGACAGAAAGAAGAGAAGTTCAAGGTAGAGGTGCACAAGAATAGCGAAGGTAACTTCCATCTTAATCAGATGGAAGCAGATAATTCCTAG | 726 | 0.4532 | MRATIYILPFLVFFFFFFALFIVLESSGDCSDFDHAQMATPLGGIQDSPSSENSLEIESLARFAVDQHNAKQNSLLEFARVVKAREQVVAGTLHHLTLEAIDAGEKKIYEAKVWVKPWMNFKELTEFKHAGDGHAPSFTTSDLGVIKDGHKPGWQSVPAHDPQVQDAANHAIKTIQQRSNSLVPYELHEVTDAKAEVIDDTAKFNLLLKVKRGQKEEKFKVEVHKNSEGNFHLNQMEADNS* | 242 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1290 | 241 | Pfam | Aspartic acid proteinase inhibitor | 55 | 129 | IPR000010 | GO:0004869 | |
| Mtr8g1290 | 241 | Gene3D | - | 38 | 139 | - | - | |
| Mtr8g1290 | 241 | Gene3D | - | 149 | 237 | - | - | |
| Mtr8g1290 | 241 | SMART | CY_4 | 40 | 130 | IPR000010 | GO:0004869 | |
| Mtr8g1290 | 241 | ProSitePatterns | Cysteine proteases inhibitors signature. | 86 | 99 | IPR018073 | - | |
| Mtr8g1290 | 241 | PANTHER | CYSTATIN FAMILY MEMBER | 38 | 237 | IPR027214 | GO:0004869 | |
| Mtr8g1290 | 241 | SUPERFAMILY | Cystatin/monellin | 148 | 233 | IPR046350 | - | |
| Mtr8g1290 | 241 | SUPERFAMILY | Cystatin/monellin | 41 | 131 | IPR046350 | - | |
| Mtr8g1290 | 241 | PANTHER | CYSTEINE PROTEINASE INHIBITOR 6 | 38 | 237 | - | - | |
| Mtr8g1290 | 241 | CDD | CY | 43 | 129 | IPR000010 | GO:0004869 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g1290 | Mtr-Chr8 | 15811912 | 15815200 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g1290 | - | - | gmx:100499887 | 358.221 |