Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1263 ATGGCTAACTTTTGGATTTCAATTGGTGAAATTTCATGGACTTGTCTTAAGAAGTTTGATTTAAATTCTTTATGTTCTCAAAGAAGCTTAGTAGACACAATCAACATACTCTTTCTCTGTGTCTACTACACATCTTTGCTTATCACTTTAATCAGAAAAAGTTGTACAAATGAAAGCCAAAGAAAATGCTGGAATTTCCTTATTGTCTCAATCTGTTGTGCACTTATTAGCATTGCATTTTTCAGTTTTGGCTTATGGAATCTTATAGCTAAAACTGATAACTCTGAGGAACTGAATTTGGTAGTTTGCATTATCAAAGGATTCATTTGGATTTCTTTTGCTGTTTCATTGATTGTTCAAAGAATCAAATTGGTTAGAATATTAAACTCTATATGGTGGCTTTCTTCTTGTATATTGGTTTCATCTCTCAACATTGAAATTCTGTTAAAAAATCATGTCATTGAAACTTTTGATATTGTACAGTGGCTTGTATATTTCCTTCTTCTATATTGTGCCTTCAAAAATCTTGGTCACATAAGAGATAATAGAGTTCAAGAATGTTTATCTGAGCCACTATTAGCTCAAAAAAATGAAACTGCACAAACTGAATTAGGTCATGCTACTTTTCTTAGCAAGTTGATTTTCTCTTGGGTTAATTCATTACTCAGTTTAGGTTACTCAAAGCCACTAGCTCTTGAAGACATTCCTTCCCTTGTTTCTGAAGATGAAGCAAACATGGCTTATAAAAAATTTGTTCATGCTTGGGAATCACTTGTTAGAGAGAGGACTAAGAACAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTAGATCATACCTAAAAGAAAACATATTAATAGCATTTTATGCATTAATCAGAACTATAGCTGTTGTAGTTTCACCTCTAATACTCTATGCTTTTGTTAACTACTCAAATAGAACTGAGGAAGATCTCAAACAAGGTCTTTCCATAGTTGGTTTTTTGGTTGTCACTAAAGTCTTTGAGTCGGTATCTCAAAGACATTGGTTTTTTAACTCAAGGAGGTCAGGTATGAAAATGAGATCAGCTCTAATGGTAGCAGTTTATCAAAAGCAGCTAAAGCTTTCTAGCTCGGCAAGGAAAAGACACTCGGTCGGAGAAATTGTGAATTACATTGCAGTTGATTCTTATAGAATGGGAGAATTTCCATGGTGGTTTCATATAACATGGACTTCTGCATTGCAACTTTTTCTTTCCACCAGTGTTCTCTTTATTGTTGTTGGTATTGGTGCTCTTCCTGGTTTAGTGCCTCTTCTTATATGTGGACTTTTCAATATACCATTTGCAAGGATCCTACAAAATTGTCAGTCACAGTTTATGATTGCACAGGACGAACGTCTTCGAACAACTTCAGAGATTCTAAATAGTATGAAGATCATTAAGTTACAATCATGGGAAGAAAAATTCAAGAACTTAGTCGAGTCGCTGCGCGATAAAGAGTTTGTATGGTTGTCTAAGGCACAGATCCTGAAAGCTTCTGGTTCATTTCTTTATTGGATATCTCCTGCAATGGTTTCTGCTGTTGTTTTCCTTGCATGTTCTGTCACTAAAAGTGCACCATTGAATGCTGAAACCATTTTCACAGTTCTTGCAACATTAAGGAACATGGGAGAACCTGTTAGAACTATCCCAGAGGCTCTATCCAATATGATTCAAGCTAAGGTTTCATTCGATCGTCTTAATAACTTTTTTCTTGATGAAGACCTTAACAATAATGAGAGTGAAAAAAACTTAAACCAGTGTTCAGTTAATGCTTTACAAATTCAAGATGGAAACTTCATTTGGGATCATGAATCTATGTCTCCAGCCTTAAAAGATGTTAATTTAGAGATAAAATGGAGACAGAAAATTGCAGTTTGTGGACCAGTTGGATCTGGAAAATCATCTCTTTTGTATGCAATACTTGGAGAGATCCCTAAGATTTCAGGAACTGTTTATGTAGGTGGCACACTAGCCTATGTCTCTCAATCTTCTTGGATACAAAGTGGAACAGTTCAAGATAATATACTATTTGGCAAGGAAATGGACAAAACAAGATATGAGAAAGCAATTAAAGCTTGTGCTTTAGATAAGGATATCGATGATTTTAGCCACGGTGATCTTACAGAAATAGGTGAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTTCTTGATGATCCTTTCAGTGCAGTTGATGCTCATACAGCTGCAATACTATTCAATGACTGTGTCATGACTGCTTTAAGAGACAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCGGAAGTCGATACTATCTTGGTAATGGAGGATGGAAAAGTTATTCAATCAGGTAGTTATGAGAATCTCCTAAAATCTGGAACAGCCTTTGAACTACTTGTGAGTGCTCATAAAGTCACAATTAACGATTTGAATCAAAATAGTGAGGTTTTGTCTAATCCTCAAGACTCTCATGGTTTTTATCTCACGAAAAATCAAAGCGAAGGAGAGATTTCTAGCATCCAGGGTTCAATTGGTGCTCAGCTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATGGAAGCCACTTTGGGATTATATTAATTATTCCAATGGGACATTGATGTCGTGTTTGGTCATATTAGGACAATGTTGTTTTTTGGCTTTGCAGACTTCATCGAACTTTTGGCTTGCTACAGCCATTGAAATTCCAAAAGTAACTGATACCACCTTGATTGGAGTTTATGCATTACTCTCTATTTCTAGTACTTCTTTTGTATATGTAAGGTCTTACTTTGCTGCACTTTTGGGATTAAAAGCTTCGACGGCTTTCTTCTCAAGCTTCACTACATCTATCTTCAATGCTCCAATGCTTTTCTTTGATTCAACTCCTGTAGGAAGAATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCCTCACCTGTGTAGCAATTGTGGCAATTGAAGTTTTGGTGATGATTTTTGTGATTGCTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATTAATATTCATTCAGAAATATTATCAAGCCACTGCAAGGGAACTAATACGGATCAACGGAACCACCAAAGCTCCAGTCATGAATTTTGCAGCCGAGACATCACTTGGAGTGGTTACCGTACGAGCATTCAACATGGTAGACAGATTTTTCAAAAACTACTTAAAACTTGTGGATACAGATGCTTCATTGTTCTTTCATTCCAATGTGGCAATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCTAAATTTGACTGTCATCACTGCAGCTTTGCTACTCATTCTACTTCCTCAAAGATATCTATCCCCAGGCCGCGTGGGATTGTCTCTTTCTTATGCTCTTACCTTGAATGGAGCCCAAATATTTTGGACTAGATGGTTTTCCAACTTATCAAATTATATCATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCTGAGCCTCCTGCCATTGTGGATAATAACCGGCCGCCATCTTCATGGCCTTCCAAGGGCAAGATTGATCTTCAAGGGTTAGAGGTTCGATATCGTCCTAATGCTCCATTAGTCCTTAAGGGAATCACTTGTACATTTAAAGGAGGAAGTAGGGTCGGAGTTGTTGGAAGGACCGGAAGTGGAAAAAGTACACTGATTAGTGCTTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTGATATTCTTATTGATGGGATAAACATTTGCTCAATGGGATTGAAGGATTTGAGAATGAAGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACAAACCTGGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTGTAGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGCCAATTATTTTGCCTCGGAAGAGTTCTACTTAAAAGGAACAGAATTCTTGTTTTGGATGAAGCTACTGCATCCATTGATTCAGCCACAGATGCGATTCTACAAAGAATAATTAGACAAGAATTTGAAGAATGCACAGTTATAACTGTTGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTTCTATCTTATGGGAAACTGGTGGAATATGATGAGCCTTCAAAGCTAATGGATACCAACTCTTCATTCTCTAAGCTGGTAGCTGAATATTGGTCTAGCTGCAGGAAGAATTCCCTTCCATATATTAGCAAGAAGCATCAATGA 4392 0.3711 MANFWISIGEISWTCLKKFDLNSLCSQRSLVDTINILFLCVYYTSLLITLIRKSCTNESQRKCWNFLIVSICCALISIAFFSFGLWNLIAKTDNSEELNLVVCIIKGFIWISFAVSLIVQRIKLVRILNSIWWLSSCILVSSLNIEILLKNHVIETFDIVQWLVYFLLLYCAFKNLGHIRDNRVQECLSEPLLAQKNETAQTELGHATFLSKLIFSWVNSLLSLGYSKPLALEDIPSLVSEDEANMAYKKFVHAWESLVRERTKNNTKSLVLWSIVRSYLKENILIAFYALIRTIAVVVSPLILYAFVNYSNRTEEDLKQGLSIVGFLVVTKVFESVSQRHWFFNSRRSGMKMRSALMVAVYQKQLKLSSSARKRHSVGEIVNYIAVDSYRMGEFPWWFHITWTSALQLFLSTSVLFIVVGIGALPGLVPLLICGLFNIPFARILQNCQSQFMIAQDERLRTTSEILNSMKIIKLQSWEEKFKNLVESLRDKEFVWLSKAQILKASGSFLYWISPAMVSAVVFLACSVTKSAPLNAETIFTVLATLRNMGEPVRTIPEALSNMIQAKVSFDRLNNFFLDEDLNNNESEKNLNQCSVNALQIQDGNFIWDHESMSPALKDVNLEIKWRQKIAVCGPVGSGKSSLLYAILGEIPKISGTVYVGGTLAYVSQSSWIQSGTVQDNILFGKEMDKTRYEKAIKACALDKDIDDFSHGDLTEIGERGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRDKTVILVTHQVEFLSEVDTILVMEDGKVIQSGSYENLLKSGTAFELLVSAHKVTINDLNQNSEVLSNPQDSHGFYLTKNQSEGEISSIQGSIGAQLTQEEEKVIGNVGWKPLWDYINYSNGTLMSCLVILGQCCFLALQTSSNFWLATAIEIPKVTDTTLIGVYALLSISSTSFVYVRSYFAALLGLKASTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSLTCVAIVAIEVLVMIFVIASVTWQVLIVAVPAMVALIFIQKYYQATARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFKNYLKLVDTDASLFFHSNVAMEWLVLRIEALLNLTVITAALLLILLPQRYLSPGRVGLSLSYALTLNGAQIFWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSKGKIDLQGLEVRYRPNAPLVLKGITCTFKGGSRVGVVGRTGSGKSTLISALFRLVEPSRGDILIDGINICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFEECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSLPYISKKHQ* 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1263 1463 CDD ABCC_MRP_domain2 1209 1429 - -
Mtr8g1263 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 599 822 IPR003439 GO:0005524
Mtr8g1263 1463 SMART AAA_5 1237 1429 IPR003593 -
Mtr8g1263 1463 SMART AAA_5 626 799 IPR003593 -
Mtr8g1263 1463 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 62 1456 - -
Mtr8g1263 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g1263 1463 SUPERFAMILY ABC transporter transmembrane region 924 1193 IPR036640 GO:0005524|GO:0016021
Mtr8g1263 1463 Gene3D ABC transporter type 1, transmembrane domain 258 581 IPR036640 GO:0005524|GO:0016021
Mtr8g1263 1463 Gene3D ABC transporter type 1, transmembrane domain 862 1192 IPR036640 GO:0005524|GO:0016021
Mtr8g1263 1463 SUPERFAMILY ABC transporter transmembrane region 272 579 IPR036640 GO:0005524|GO:0016021
Mtr8g1263 1463 ProSitePatterns ABC transporters family signature. 724 738 IPR017871 GO:0005524
Mtr8g1263 1463 CDD ABCC_MRP_domain1 599 799 - -
Mtr8g1263 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 899 1161 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g1263 1463 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 62 1456 - -
Mtr8g1263 1463 Gene3D - 606 844 IPR027417 -
Mtr8g1263 1463 CDD ABC_6TM_ABCC_D2 893 1186 IPR044726 GO:0140359
Mtr8g1263 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 597 820 IPR027417 -
Mtr8g1263 1463 CDD ABC_6TM_ABCC_D1 285 573 IPR044746 GO:0140359
Mtr8g1263 1463 Pfam ABC transporter 1228 1376 IPR003439 GO:0005524
Mtr8g1263 1463 Pfam ABC transporter 617 751 IPR003439 GO:0005524
Mtr8g1263 1463 Gene3D - 1194 1445 IPR027417 -
Mtr8g1263 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1444 IPR027417 -
Mtr8g1263 1463 Pfam ABC transporter transmembrane region 284 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g1263 1463 Pfam ABC transporter transmembrane region 903 1161 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr8g1263 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1213 1445 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1263 Mtr-Chr8 15497255 15503138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1263 584 855 Calmodulin-binding Proteins AT2G36910 26.190 2.84e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1263 - - gmx:100784827 2211.03