Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1253 ATGGATCGGGAATGGTCCATCAACGACTTTGAGATCGGAAAACCACTTGGGAAAGGCAAATTCGGGAGAGTATACGTTGCCAGAGAAGTCAAGAGTAAATTTGTGGTTGCATTGAAGGTTATCTTTAAGGAACAACTTGAAAAGTACAAATTTCACCATCAACTGAGGAGGGAAATGGAGATACAGATAAGTCTTAAACATCCAAACGTCTTGCATCTCTATGGTTGGTTTCATGATTCCGAGCGTGTTTTCTTGATTCTTGAATATGCTCATAATGGTGAACTATACAAGGAGCTTAGCAAAAGAGGTCATTTTTCAGAGAAGCAAGCTGCAACGTACATTTTAAGCCTCACGGAAGCATTGACATATTGTCACGAGAACCATGTTATTCACAGAGATATCAAGCCTGAAAATTTGTTGCTTGATCATGAGGGTCGTCTAAAGATTGCGGATTTTGGTTGGTCTGTACAATCTAAAGACAAAAGAAAAACCATGTGTGGTACATTGGATTATTTAGCTCCTGAAATGGTAGAAAACAAAACTCATGATTATGCTGTTGATAACTGGACTCTTGGTATCCTTTGCTATGAGTTCCTTTATGGTGTTCCTCCATTTGAGGCCGAGAGTCAAGCTGATACATTCGAAAGGATAAAAAAGGTTGATTTAAGCTTCCCTCCTAGTCCTCTTGTTTCTTCAGATGCCAAAAATCTGATTAGTCGGCTCCTAGTAAAAGATTCCTCAAGAAGACTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCGTATGGGTGTATGCTAG 816 0.3934 MDREWSINDFEIGKPLGKGKFGRVYVAREVKSKFVVALKVIFKEQLEKYKFHHQLRREMEIQISLKHPNVLHLYGWFHDSERVFLILEYAHNGELYKELSKRGHFSEKQAATYILSLTEALTYCHENHVIHRDIKPENLLLDHEGRLKIADFGWSVQSKDKRKTMCGTLDYLAPEMVENKTHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFERIKKVDLSFPPSPLVSSDAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNANRMGVC* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1253 271 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 2 270 IPR030616 GO:0004672
Mtr8g1253 271 Gene3D Transferase(Phosphotransferase) domain 1 94 269 - -
Mtr8g1253 271 SUPERFAMILY Protein kinase-like (PK-like) 4 264 IPR011009 -
Mtr8g1253 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Mtr8g1253 271 PIRSF ILK 1 266 - -
Mtr8g1253 271 Pfam Protein kinase domain 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1253 271 ProSiteProfiles Protein kinase domain profile. 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g1253 271 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Mtr8g1253 271 CDD STKc_Aurora 9 261 - -
Mtr8g1253 271 ProSitePatterns Protein kinases ATP-binding region signature. 16 43 IPR017441 GO:0005524
Mtr8g1253 271 SMART serkin_6 10 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1253 Mtr-Chr8 15395814 15399014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1253 2 264 CBL-interacting serine-threonine protein kinases AT5G10930 38.889 5.40e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mtr8g1253 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1253 K08850 - gmx:100775802 496.123