Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1241 ATGGTGCCATTGAGGTCTATTATTAAAGAAGCATGCGAGAAATCATTAATTGTTGCAAAGTTCTTTTGCGTTTTACACGTTACCAACAAATATTTGATCGATCCTGTTCAGACTATTGGTCCTAGCATGCTTCCTACAATCGATGTTACACCAAGTCTCTATCTTGCTGAAAGGATCTCACCTCGATTTGGTAAAGCTGCTCAGGGAGATATTGTAATCCTCCGCTCACCTCGTAACCCTAGAATGTGCATTACAAAGCGCTTGGTTGGATTAGAGGGCGATACCATTACATATGTTGCTGATCCCAATAAGGATGATAAGCAGGAGACAGTTGTGGTTCCAAAGGGTCATGTTTGGATAGAGGGTGATAACAAATATAAAAGCAACGATTCTAGAAATTTTGGTCCAGTTCCTTATGGCCTTATCGAGAGTAGGTTATTCTGGAAGGTATCTCCACTTAAAGATTTTGGGTCGTTCTGGAATAAATGA 489 0.4029 MVPLRSIIKEACEKSLIVAKFFCVLHVTNKYLIDPVQTIGPSMLPTIDVTPSLYLAERISPRFGKAAQGDIVILRSPRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVWIEGDNKYKSNDSRNFGPVPYGLIESRLFWKVSPLKDFGSFWNK* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1241 162 Pfam Signal peptidase, peptidase S26 21 99 IPR019533 GO:0004252|GO:0006465
Mtr8g1241 162 Pfam Signal peptidase, peptidase S26 108 143 IPR019533 GO:0004252|GO:0006465
Mtr8g1241 162 Gene3D Umud Fragment, subunit A 28 162 - -
Mtr8g1241 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 31 47 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr8g1241 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 84 96 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr8g1241 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 132 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr8g1241 162 CDD S26_SPase_I 35 145 IPR019533 GO:0004252|GO:0006465
Mtr8g1241 162 ProSitePatterns Signal peptidases I signature 3. 118 131 IPR019758 GO:0004252|GO:0016021
Mtr8g1241 162 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 3 161 - -
Mtr8g1241 162 SUPERFAMILY LexA/Signal peptidase 31 160 IPR036286 -
Mtr8g1241 162 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 3 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1241 Mtr-Chr8 15240216 15242600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1241 43 157 MADS-box Gene Family AT1G29960 53.043 1.72e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1241 K09647 - csin:114265272 212.616