Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1239 ATGGCCCAACCTCTGTTATTCACAGTGAAGAGGTGTGCCCCTGAATATGTAAGACCATCAAAACCTGCACCTCATGAAATAAAATTACTTTCAGACATAGATGACCAAGAAGGGTTACGTTTTCAAATTCCAGCGATCCAATTTTATAAATATGATCCAAATATGGCAGGGAAAGACCCTGTTGATATTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAAGGTCCTGGTAGGAAGCTTATGGTAGATTGTAATGATGAAGGTATTTTGTTTATTGAAGCTGATGCTGATGTTAGTTTGAAAGAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGGATGAGCTTCTTTTATTGTAG 393 0.3664 MAQPLLFTVKRCAPEYVRPSKPAPHEIKLLSDIDDQEGLRFQIPAIQFYKYDPNMAGKDPVDIIRKALAKTLVFYYPFAGRLREGPGRKLMVDCNDEGILFIEADADVSLKEFGDALQPPFPCLDELLLL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1239 130 Gene3D - 8 130 IPR023213 -
Mtr8g1239 130 PANTHER ALCOHOL ACYLTRANSFERASE 7 128 - -
Mtr8g1239 130 Pfam Transferase family 13 125 - -
Mtr8g1239 130 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1239 Mtr-Chr8 15231252 15231674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1239 40 115 Monolignol Biosynthesis Gene Families AT5G48930 38.158 6.01e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1239 K19861 - mtr:MTR_1g040320 216.853