Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1235 ATGGCCGGTTCAGGTTCGTATTCCTATGTCTACGATGTGTTCATCAGCTTTAGAGGGGAGGATACTCGGCTAGGGTTTACTGGATTTCTGTACAAGACTCTATCTGAAAAGGGATTCCACACCTTCATTGACCACCACGCTGACGCGGGAAGAGGAACAACGAAGACACTTGTAGATGCAATTGAAGAGTCCAGGATTGGGATTGTTGTTTTTTCTGAGAACTATGCTTCCTCCACATGGTGTCTGGATGAACTTGCGTACATTATTGACTCCTTTTCCAATAAGAAAAACTTCCGTCGATCTGTTTTCCCAGTATTTTACAACGTAGATCCTTCTCACGTGCGACATCAGAGTGGGATTTATGGACAGGCACTTGACTCGCACCAGAAGAACAACAACTTCAATTCAGAGAAATTGAACAAATGGAAGAACGCTCTCAAACAAGCAGCTAATTTGTCCGGTTTCCATTTTAAACATGGGGATGGATATGAATATGAATTAATTGACAAGATTGTAGACTTGGTCTCCACCAAAATTGATTCCACCCCTTATTTACGTGTTGTGGATCACCCAATTGGTCTCAATTATCGAGTGTTAGAACTAAACTGGCTTCTCAATCATAATACTCATGCTGCTACTGCCACCGTTGGATCCCATGGACTCAAACTGCTCGGTATCTACGGTATGGGTGGAATAGGGAAAACAACCCTTGCTCGAGCTGTATTCAATTTCATTTCCCCCCAATTTGATGCCTTTTGTTTCCTCGAAGATGTCAGAGAAAATTCAGCAAACCACGGCTTAGTACATCTTCAACAAACTCTTCTCGCCACCTTAGCTGGACAGAAGAAGAAGAAGAAAGACTTCCAATTAGCAAGCATCAGTGAAGGACTTCTGCTATTAAAGAATATGCTCCACCGCAAGAAGGTCCTTTTGGTTCTTGATGACGTTAACAGCTCAGATCAGTTGCAAGCTACTCTTGGAAGAGGCCTCGACACTTTTGGTTATGGAACCACCATCATCATTACTACCCGGGACAAACACTTCCTAACAACTCACGGGGTTCATACGACATACAAGGTAGAGGAGTTGACCAAGGATGAGTCCCTCGAGTTGCTTTCTTGGAATGCTTTCAAGACCAACAAAATTTATCCAGATTATATCGACCTGTTAAACCGCGTAACAACTTGCGCATCTGGCCTTCCTTTGGCTTTGGAGGTTATAGGCTCATACCTGCATGGGAAAGGAGTAAAAGAATGGGAATCTGCATTAGACTCCTATGAAAAGATTCCTTCTAAAGATATCCAAACCATACTTAAGCAAACCTACAATGCTTTGGATGGAGATCTCAGGCAACTTTTTCTCGACATCGCATGTTTCTTCAAAGGATACGAACTCTCAGAGGTTGAATACCTACTCAGTGCTCACCACGGTTACTGCTTCAAACCCCACCGTTTCAGATTCTTGCTGGAAACATCTCTCATCAAGATTGACGAGCACAATCATGTGAAAATGCATGACTTGATACGGGACATGGCCAGAGAAATCGTGAGGCAGGAATCACCCGACCACCCCGGCAAACGCAGCAGGCTATGGCTTACTACGGATATCGTCGAAGTTTTAGAAAAAAACACGGGAACAAGTGAAATTCAAACCATCGTTCTGGATTTCCCCAGATATGAAAAAATGGTACGGTGGGACGGAAAAGCCTTCCAGAAGATGACAGGCCTCCAGACACTTATTATTAGAAGTCTGTGTTTTGCTGAAGGTCCGAAGAATCTTCCAAATAGTTTAAGAGTGCTGGAGTGGTGGGGATATCCTTCACAGTCTTTGCCTTCTTATTTTTACCCCAAGAAATTAGCTGTTCTGAAGTTACCGCACAGTTCCTTTATGTCACTGGAGCTGTCCAAGTCAAAGTTCGTAAATATGACACTTTTGAATTTTGATGAATGTAAAATTATAACACATATACCTGATGTATCTGGTGCCCCAAACTTAGAAAGGCTGTCTCTTGATTCTTGTGAGAATTTAGTTGAAATTCACGACTCTGTTGGATTCTTGGATAAACTTGAAATTCTGAATCTTGGGAGTTGCGCAAAGCTTCGGAATTTGCCACCCATCCATTTGACCTCTCTCCAACACCTCAATCTTTCACATTGTTCAAGTCTTGTGAGTTTTCCTGAGATATTAGGAAATATGAAAAATATTACAAGTCTTTCTTTGGAGTACACTGCCATAAGGGAATTTCCATATTCAATCGGAAATCTTCCCCGACTTAAAAGTTTAGAACTGCACGGATGTGGAAATCTTCTGTTACCAAGTAGCATTATTCTATTGTCAGAACTTGAGGAGTTGAGTATTTGGCAATGTGAAGGGTTGAAATCATATAAGCAAGACAAAGGTCCAGAAAAAGTTGGTTCAACAGTGTCTTCAAACGTGAAGTATATTGAGTTCTTTTCTTGCAATATATCGGACGACTTCATTCGAATAGGTCTTTCTTGGTTTTCAAATGTGGTAGAATTGAACCTTTCAGCAAACACTTTCACAGTTCTTCCAACATGCATCAAAGAATGCCGCTTTTTGACGATACTTATACTAGATTACTGCAGGCAACTTCGAGAAATCAGAGGAATTCCACCAAATTTAGAAATATTCTCTGCAATACGATGCACATCCTTGAACGATTTAGACCTCACGAATCTTCTTGTGTCCACCAAAGTCTGTTGTCCTTTGAGAGAGCTTGTTTTGGATGACTGTGAAAGTCTTCAAGAAATTAGAGGGATTCCACCCAGCATAGAACTTTTGTCCGCAAGAAACTGCAGATCCTTGACTATCTCGTGCAGAAGAATGTTACTGATTCAGGAGTTGCACGAGGCTGGAAATAAGAGCTTTTGTTTGCCCGGAACACAAATGCCGGATTGGTTTGAGCACCGTAGCAAAGGACATTCGATTTCTTTCTGGTTTCGTGGCAAGTTCCCTGCACTATCTCTCTGTTTTGTTGGACTCATGCATAAAATCCCTACCGGGTTCAGACCCATTGTGATCATCAATGGCAATATAATGAAAACAATGTTGCCAGCTGAAAAATGGTTTGATTTTGAGTTCCCAGTGTTAACTGATCATATATTTATTGTTGGTGAAAGACACATAAAATTTGAAGATAATATGGATGAAGTACTTTCAGAAAATGAATGGAATCATGCGGTGATTTCTATTGATATTGATTTTAAATGGAGCTCAAGTGGACTGTTTGCTGCGTGGATTGGACTCCATGTGATCAAACAAAAATGCAGCATGGACAGAATTCAATTCACCAATCCTTGCAACTGCTGA 3330 0.4129 MAGSGSYSYVYDVFISFRGEDTRLGFTGFLYKTLSEKGFHTFIDHHADAGRGTTKTLVDAIEESRIGIVVFSENYASSTWCLDELAYIIDSFSNKKNFRRSVFPVFYNVDPSHVRHQSGIYGQALDSHQKNNNFNSEKLNKWKNALKQAANLSGFHFKHGDGYEYELIDKIVDLVSTKIDSTPYLRVVDHPIGLNYRVLELNWLLNHNTHAATATVGSHGLKLLGIYGMGGIGKTTLARAVFNFISPQFDAFCFLEDVRENSANHGLVHLQQTLLATLAGQKKKKKDFQLASISEGLLLLKNMLHRKKVLLVLDDVNSSDQLQATLGRGLDTFGYGTTIIITTRDKHFLTTHGVHTTYKVEELTKDESLELLSWNAFKTNKIYPDYIDLLNRVTTCASGLPLALEVIGSYLHGKGVKEWESALDSYEKIPSKDIQTILKQTYNALDGDLRQLFLDIACFFKGYELSEVEYLLSAHHGYCFKPHRFRFLLETSLIKIDEHNHVKMHDLIRDMAREIVRQESPDHPGKRSRLWLTTDIVEVLEKNTGTSEIQTIVLDFPRYEKMVRWDGKAFQKMTGLQTLIIRSLCFAEGPKNLPNSLRVLEWWGYPSQSLPSYFYPKKLAVLKLPHSSFMSLELSKSKFVNMTLLNFDECKIITHIPDVSGAPNLERLSLDSCENLVEIHDSVGFLDKLEILNLGSCAKLRNLPPIHLTSLQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGNLPRLKSLELHGCGNLLLPSSIILLSELEELSIWQCEGLKSYKQDKGPEKVGSTVSSNVKYIEFFSCNISDDFIRIGLSWFSNVVELNLSANTFTVLPTCIKECRFLTILILDYCRQLREIRGIPPNLEIFSAIRCTSLNDLDLTNLLVSTKVCCPLRELVLDDCESLQEIRGIPPSIELLSARNCRSLTISCRRMLLIQELHEAGNKSFCLPGTQMPDWFEHRSKGHSISFWFRGKFPALSLCFVGLMHKIPTGFRPIVIINGNIMKTMLPAEKWFDFEFPVLTDHIFIVGERHIKFEDNMDEVLSENEWNHAVISIDIDFKWSSSGLFAAWIGLHVIKQKCSMDRIQFTNPCNC* 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1235 1109 SUPERFAMILY "Winged helix" DNA-binding domain 433 541 IPR036390 -
Mtr8g1235 1109 PRINTS Disease resistance protein signature 223 238 - -
Mtr8g1235 1109 PRINTS Disease resistance protein signature 303 317 - -
Mtr8g1235 1109 PRINTS Disease resistance protein signature 397 411 - -
Mtr8g1235 1109 PRINTS Disease resistance protein signature 706 722 - -
Mtr8g1235 1109 SUPERFAMILY L domain-like 570 895 - -
Mtr8g1235 1109 Pfam TIR domain 11 179 IPR000157 GO:0007165
Mtr8g1235 1109 Gene3D - 206 356 IPR027417 -
Mtr8g1235 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 456 IPR027417 -
Mtr8g1235 1109 ProSiteProfiles TIR domain profile. 9 179 IPR000157 GO:0007165
Mtr8g1235 1109 Pfam NB-ARC domain 220 446 IPR002182 GO:0043531
Mtr8g1235 1109 Gene3D - 5 184 IPR035897 -
Mtr8g1235 1109 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Mtr8g1235 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 902 1069 IPR044974 GO:0006952
Mtr8g1235 1109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 895 IPR044974 GO:0006952
Mtr8g1235 1109 Gene3D Ribonuclease Inhibitor 729 956 IPR032675 -
Mtr8g1235 1109 Gene3D Ribonuclease Inhibitor 565 728 IPR032675 -
Mtr8g1235 1109 Gene3D - 362 446 IPR042197 -
Mtr8g1235 1109 PANTHER ARCHAEAL ATPASE 902 1069 - -
Mtr8g1235 1109 PANTHER ARCHAEAL ATPASE 21 895 - -
Mtr8g1235 1109 SMART till_3 10 152 IPR000157 GO:0007165
Mtr8g1235 1109 SMART AAA_5 220 366 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1235 Mtr-Chr8 15185058 15190056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1235 6 795 WRKY Transcription Factor Family AT4G12020 31.204 3.51e-80 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1235 - - mtr:MTR_8g039870 2202.17