Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1230 ATGGAGCATGATGGGAATAGGAATAGCAGAATCAATCCAACAAGTGGGTTTTGTAGCTCCAATTCAATCTTCTACAGCAAGAGGAAACCCCTCCTACTTCCTCCAAATCAGTCCTTAGATGCCACCACCTTTATCTCCTCCCGCGCCCATCACGGCCACACTGCTTTCATCGACGCCTCCACCGGCCACCACTTTACCTACCAACAACTTTGGAGAGCCGTCGATGCTGTCTCCTCCTCTCTCTCCAACATGGGAATCAAAAAGGGTGATGTTATCCTCCTCCTTTCTCCTAACTCCATTTACTTCCCTGTGGTGTGTCTCAGTGTCATGTCCCTCGGCGCCATCATCACCACCACCAATCCCCTCAACACAGTACATGAAATCGCGAAGCAGATCGCGGATTCCAAACCTGTCCTCGCCTTTACAACCTCGCCCCTCGTTTCCAAAATCAATGCAGCATCGCCAACTCTTCCAATTATTCTTATGGAAGCCGATGGGAACTCGACATCATCAAACACACTGGAGGAAATGATGAAGAAAGAAGGTCAATCCTATGATGACACGTGGACTAAAAGTTCTGGACCGGCCAGAAGACCAAAGAGAGAGCAAGTCAACCAAGACGACACAGCTACTCTACTCTACTCATCTGGAACAACAGGACCAAGCAAAGGAGTAGTATCTTCACATAGAAACCTCATAGCAATGGTTCAAATTGTATGTGCTAGGTTTAACCACGAAGAATATGAGCGGGGAAATACATTCATATGCACAATTCCCATGTTTCACATATACGGTCTAGCAATGTTCGCTGGGCTTCTCTCTTTAGGTTCAACAATCGTTGTTCTCTCCAAGTTCGAAATGCATGACATGCTTTCATCCATTGAAAAGTTCAAAGTCACGTTCCTACCGCTTGTGCCACCCATATTCGTCGCTATGCTCAACAATGCTGATGCGATTAAGAGAAAATACGACTTGAGTTCCCTTCATACGGTGCTATGCGGTGGGGCTCCTCTTAGCAAAGAGGTTACTGAAGGGTTTGTTGATAAGTACCCTAATGTTGCCATCCTTCAGGGTTATGGTCTGACAGAATCCTTTGGAGCTGGGGCTTCTACTGATTCTTTGGAAGAGAGTCGTAAGTACGGCACGGCGGGGCTTTTGTCTTCCTCCATTGAGGCTATCATTGTTGACACTGAAACTGCTAAACTGCTTCCAGTTAACCAGACCGTTGAGCTTTGGCTCAGGGGTCCTACCACCATGCAAGGTTATTTAAATAACGAGGAGGCAACAAAATCAACCCTTACTGCAGAGGGTTGGTTAAGAACTGGGGATCTTTGCTATATTGATAGTGATGGATTCTTATTTGTGGTTGATAGGTTGAAAGAGCTAATTAAATACAAAGGGTATCAGGTCCCTCCAGCTGAACTAGAGGCTTTGTTGCTAACTCATCCTGCAATTTTAGATGCTGCTGTCATACCCTATCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATATGTGGTAAGGAAGGATGGAAGTAACATATCAGAAAGCCAAGTTATGGAATTTGTTGCAGGCCAGGTGGCTCCGTACAAAAGAATTCGAAAAGTTGCATTCATACCTTCCATACCTAAAAATCCGTCTGGTAAAATTCTTCGGAGGGATCTCATCAAGCTCGCTACTTCTAAACTCTGA 1692 0.4563 MEHDGNRNSRINPTSGFCSSNSIFYSKRKPLLLPPNQSLDATTFISSRAHHGHTAFIDASTGHHFTYQQLWRAVDAVSSSLSNMGIKKGDVILLLSPNSIYFPVVCLSVMSLGAIITTTNPLNTVHEIAKQIADSKPVLAFTTSPLVSKINAASPTLPIILMEADGNSTSSNTLEEMMKKEGQSYDDTWTKSSGPARRPKREQVNQDDTATLLYSSGTTGPSKGVVSSHRNLIAMVQIVCARFNHEEYERGNTFICTIPMFHIYGLAMFAGLLSLGSTIVVLSKFEMHDMLSSIEKFKVTFLPLVPPIFVAMLNNADAIKRKYDLSSLHTVLCGGAPLSKEVTEGFVDKYPNVAILQGYGLTESFGAGASTDSLEESRKYGTAGLLSSSIEAIIVDTETAKLLPVNQTVELWLRGPTTMQGYLNNEEATKSTLTAEGWLRTGDLCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQYPMAYVVRKDGSNISESQVMEFVAGQVAPYKRIRKVAFIPSIPKNPSGKILRRDLIKLATSKL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1230 563 Gene3D - 21 460 IPR042099 -
Mtr8g1230 563 Pfam AMP-binding enzyme C-terminal domain 474 549 IPR025110 -
Mtr8g1230 563 ProSitePatterns Putative AMP-binding domain signature. 212 223 IPR020845 -
Mtr8g1230 563 MobiDBLite consensus disorder prediction 180 207 - -
Mtr8g1230 563 SUPERFAMILY Acetyl-CoA synthetase-like 46 560 - -
Mtr8g1230 563 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 562 - -
Mtr8g1230 563 Gene3D - 461 562 IPR045851 -
Mtr8g1230 563 CDD 4CL 33 555 - -
Mtr8g1230 563 Pfam AMP-binding enzyme 48 465 IPR000873 -
Mtr8g1230 563 PANTHER BNAA06G14440D PROTEIN 10 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1230 Mtr-Chr8 15120156 15124004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1230 7 563 Monolignol Biosynthesis Gene Families AT1G20500 63.186 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1230 K10526 - gmx:100811344 816.224