Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1226 ATGGACGCTAACCGCCGCGTCGTGCGGACGCTAGTATCAAAACTAAGCTCCGTTTCAGAAAAAACCCGAATCGAATCACTCATCGAGCTTCGTCAATTATCAAAACAAGATCCATCAACCCGACCCATAATAGCCGAATCAGGCGCAATCCCTTACCTCGCTGAAACCCTCTATTCTTCTTTACACCCTTCTCAAGAAAACGCTACAGCAACACTTTTAAACCTTTCCATAACGGAAAAAGAACCTATCATGTCCACGCGCGGTGTTCTCGACGCGCTTGCGCATGTGATTTCTCATCATTCATCTACCTCCGCCGCCGCTGCTGTTCAATCCGCCGCCGCTACGATTCACAGCCTTCTTTCCTCGGTGGATGATTATCGTACTGTTGTTGGATCTAAACGTGAGATTGTTTATGCGCTTGTTGATATTCTTCGTTGCCACCGTTCCTCACCGCCAAGAACGGTGAAGGATTCATTGAAAGCGCTTTTTGCAATCGCACTTCATCCATTGAATCGTGCTACGATGGTTCAATTTGGTGTTGTTCCCGCGTTGTTTTCGTTGATCGTTAATGATGGTAGAGTAGGGATTGTTGAAGATGCTTCCGCAGTTATTGCGCAGGTCGCCGGTTGCGAGGAAAGTGTTGAGGCGTTTAAGAAGGTTTCTGGTGTGGGAGTGCTGGCGGATTTACTTGATCTTGCTACCGGTTCGAGTATGAGGACGAGGGAAAATGCGGTGTCGGCATTGCTTAATCTTGTGAGATGTGGTGGAGATGTGGTGGCTGGAGATGTAAGAGACGCGGTGGCGTTTGGTGCGATGGATGGAATTGCTGATGTTAAAGATAAAGGAAGTGTTAAGGGGCAGAGTAAGGCGATGGAGTTGATGAGAGTGATGGTTGGTGATGTTCGTAGTCACGGTGATGTTCGTAGTCAAGGTGATGTTCGTAATCATGGTAATGTTGGTTTGAATAGTGATTCGTCGTTTGGTTCTTATATGAATGAAGATAGTGGTACGTCATTTTGA 1020 0.4686 MDANRRVVRTLVSKLSSVSEKTRIESLIELRQLSKQDPSTRPIIAESGAIPYLAETLYSSLHPSQENATATLLNLSITEKEPIMSTRGVLDALAHVISHHSSTSAAAAVQSAAATIHSLLSSVDDYRTVVGSKREIVYALVDILRCHRSSPPRTVKDSLKALFAIALHPLNRATMVQFGVVPALFSLIVNDGRVGIVEDASAVIAQVAGCEESVEAFKKVSGVGVLADLLDLATGSSMRTRENAVSALLNLVRCGGDVVAGDVRDAVAFGAMDGIADVKDKGSVKGQSKAMELMRVMVGDVRSHGDVRSQGDVRNHGNVGLNSDSSFGSYMNEDSGTSF* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1226 339 SMART arm_5 210 253 IPR000225 GO:0005515
Mtr8g1226 339 SMART arm_5 37 77 IPR000225 GO:0005515
Mtr8g1226 339 SMART arm_5 168 209 IPR000225 GO:0005515
Mtr8g1226 339 PANTHER U BOX DOMAIN-CONTAINING 2 308 - -
Mtr8g1226 339 Gene3D - 1 280 IPR011989 -
Mtr8g1226 339 SUPERFAMILY ARM repeat 6 295 IPR016024 -
Mtr8g1226 339 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 308 - -
Mtr8g1226 339 MobiDBLite consensus disorder prediction 305 339 - -
Mtr8g1226 339 MobiDBLite consensus disorder prediction 315 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1226 8 320 U-box Gene Family AT2G23140 32.484 9.21e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1226 - - mtr:MTR_8g039560 603.979