Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1225 ATGAAAATCCCAATTTTTCTAACACCTTTCCTTCTCTGCCTCTTCATCTCCCTAGTCCAAGCACAAACCCCAAAATGTGACATCCAAGATGATGGCTCAACACTCAAAGTGTTCCATATCTTCAGCCAATGTTCTCCATTCAAACCATCAAAACCAATGTCATGGGAAGAAAGTGTCCTAAACCTACAAGCTAAAGACCAAGCTAGAATGCAATACTTCTCCAGCTTAGTTGCTAGGAAATCAGTTGTACCAATTGCATCAGCAAGACAAATAATTCAAAGTCCAACATACATTGTTAAGGCTAAGTTTGGTACTCCACCTCAAACTTTGCTTTTGGCTTTGGATACTAGTAGTGATGCTGCTTGGATTCCTTGTTCCGGTTGTGTTGGTTGTTCAACATCAAAACCTTTTGCTCCTATTAAGTCCACAAGTTTTAGGAATGTTAGCTGTGGTTCTCCTCATTGCAAACAGGTACCCAACCCCACTTGCGGTGGAAGCGCGTGTGCATTCAACTTCACTTATGGTAGTTCTTCCATTGCAGCTAGTGTGGTCCAAGACACACTTACCCTAGCAACTGACCCAATTCCAGGGTACACTTTTGGCTGTGTTAACAAAACAACAGGAAGTTCAGCACCACAACAAGGGCTATTGGGCTTGGGCCGAGGCCCATTGTCGCTCTTGTCCCAAAGCCAAAATCTCTACAAGTCCACATTCTCTTACTGTTTGCCTAGCTTTAAGTCGATTAACTTTAGTGGGTCGTTGAGACTTGGGCCAGTGTATCAGCCTAAGAGGATCAAGTATACCCCACTTCTCAGAAACCCTAGAAGATCGTCACTCTATTATGTTAACTTGGTTGCTATTAAAGTTGGTCGAAAAATCGTCGATATCCCTCCTGCAGCGCTAGCCTTCAACCCGACTACCGGTGCCGGGACCATTTTTGATTCAGGTACCGTATTTACTCGACTAGCTGAACCGGTATACACCGCCGTAAGAAACGAGTTTCGCCGACGAGTTGGCCCAAAACTACCTGTGACAACCCTAGGAGGGTTCGACACATGCTACAATGTCCCAATAGTTGTACCAACTATAACATTCTTGTTCTCAGGCATGAATGTAACACTACCACCAGACAACATCGTCATACACAGCACCGCCGGTAGCACAACATGTTTGGCCATGGCAGGAGCACCCGATAACGTGAACTCGGTGTTGAACGTGATAGCCAACATGCAACAACAAAACCACCGTGTGCTATTTGATGTACCCAACTCAAGAATTGGTATTGCTCGTGAGCTTTGCACCTAA 1305 0.449 MKIPIFLTPFLLCLFISLVQAQTPKCDIQDDGSTLKVFHIFSQCSPFKPSKPMSWEESVLNLQAKDQARMQYFSSLVARKSVVPIASARQIIQSPTYIVKAKFGTPPQTLLLALDTSSDAAWIPCSGCVGCSTSKPFAPIKSTSFRNVSCGSPHCKQVPNPTCGGSACAFNFTYGSSSIAASVVQDTLTLATDPIPGYTFGCVNKTTGSSAPQQGLLGLGRGPLSLLSQSQNLYKSTFSYCLPSFKSINFSGSLRLGPVYQPKRIKYTPLLRNPRRSSLYYVNLVAIKVGRKIVDIPPAALAFNPTTGAGTIFDSGTVFTRLAEPVYTAVRNEFRRRVGPKLPVTTLGGFDTCYNVPIVVPTITFLFSGMNVTLPPDNIVIHSTAGSTTCLAMAGAPDNVNSVLNVIANMQQQNHRVLFDVPNSRIGIARELCT* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1225 434 ProSiteProfiles Peptidase family A1 domain profile. 97 429 IPR033121 -
Mtr8g1225 434 Pfam Xylanase inhibitor C-terminal 280 429 IPR032799 -
Mtr8g1225 434 Pfam Xylanase inhibitor N-terminal 97 257 IPR032861 -
Mtr8g1225 434 PANTHER ASPARTYL PROTEASES 10 434 IPR001461 GO:0004190|GO:0006508
Mtr8g1225 434 PANTHER ASPARTYL PROTEASE AED3-LIKE 10 434 - -
Mtr8g1225 434 Gene3D Acid Proteases 258 434 IPR021109 -
Mtr8g1225 434 SUPERFAMILY Acid proteases 95 433 IPR021109 -
Mtr8g1225 434 Gene3D Acid Proteases 71 257 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1225 Mtr-Chr8 15072700 15076715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1225 97 433 Miscellaneous Gene Families AT1G77480 27.128 4.81e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1225 - - gmx:100788182 692.575