Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1210 ATGGCTTTTTCTTCCTCTCATGGCGCATCTCAGAAAAAATATGATGTTTTCATCAGCTTTCGAGGCGAAGATACTCGAACTTGTTTCACAAGCCATCTTCACGCTGCTCTTTGCCGAACCCATTTACATACCTACATAGACTACAAGATCGAGAAAGGAGATGATGTTTGGTCAGAACTTGTTAAAGCAATCAAACAATCCACTCTTTTTCTTGTTGTGTTCTCGGAGAACTACGCGTCTTCAACATGGTGTTTGAACGAACTGGTTGAAATAATGGAGTGTAGTAACAAAAATGAAGATGACAACGTTGTTGTTGTTCCTGTGTTCTACCATGTTGACCCTTCACACGTGCGGAAGCAGACTGGGAGTTACGGCACTGCGTTGGAAAAACATATGGAGCAAGACAACAATGGTGATAAGATGATGCAAAATTGGAAGAATGCTCTTTTTCAAGCTGCTAATTTGTCTGGTTTTCATTCTGCAACATACAGGACTGAATCTGACTTAATTGAAGACATTACCAGAGTTGTATTAGGAAAATTAAATCAGCAATGCACAAATGATCTTACATGTAATTTTATACTTGATGAAAACTATTGGAGCATTCAATCATTAATAAAATTTGATTCAGCACAAGTTCAAATCATTGGAATTTGGGGTATGGGAGGCACAGGTAAGACAACCCTTGCTTCTATTCTGTTTCAAAGGTTCTCTTTCAAATATGAAGGCAGCTGCTTGTTTGAAAAGGTGACAGAAGTATCGAAAAGGCATGGAATCAATTACGCGTGCAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTGATATTGACAGTCCCAAACTAATACCATCTATGATCAGAAGAAGACTCAAAAGCATGAAATCTTTCATTGTACTAGATGATGTACATAATTCAGAACTTCTTCAAAACTTGATTGGAGTGGGACATGGTTGGCTAGGATCTGGTAGCACAGTCATCGTGACTACGAGGGATAAGCATGTGCTGATAAGTGGAGGAATCGACAAAATTTATGAAGTTAAGAAGATGAACTCCCGCAATTCCGTTAAGCTTTTTAGCATGAATGCTTTTGACAAAGTCTCGCCTAAGGATGGATATGTGGAGCTCTCAAAAAGAGCAGTTGATTATGCCAACGGAAACCCGTTAGCTTTGAAAGTATTGGGATCTTTACTTCGTTGTAAAAGTGAAATTGAATGGGACTGTGCATTAGCTAAACTGAAAAAAATTCCAAACAACGAAATTGATTCTATATTCAGATTGAGTTATGATGAATTGGATGATAAAGAGAAAGATATATTTTTGGACATTGCATGCTTTTTCAAAGGACATGAAAGAAATAGCATAACAAAAATATTAAATGAGTGTGGTTTCTTTGCTGATATTGGGATAAGTCATCTTTTAGACAAGGCTCTTGTGAGGGTTGACTCTAAAAATTGCATACAAATGCACGACTTGATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCACATAAGAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTACGATGTATTGAAAAATAATAGAGGATCTAAGAATGTTGAAGCCATATTTTTTGATGCTACTCAATGCACACATGTAAATTTAAGACCAGACACATTTGAAAAGATGAAAAATCTAAGATTGCTTGCTTTTCAAGACCAAAAGGGAGTTAAATCTGTAAGTCTTCCGCACGGTCTTGGTTTATTGCCAGAAAATCTGAGATATTTTCTATGGGATGGCTATCCATTGAAAACTCTGCCTCCAACCTTTTGTCTTGAAATGCTTGTGGAGCTTTCCTTGACTGGAAGCCTTGTGGAAAAACTTTGGAATGGAGTCCTGAATGTGCCCAATTTAGAGAAAATTGACCTGAGTGGTTCCACAAAACTGATAGAGTGTCCAAATGTGTCTGGTTCTCCGAATCTAAAATATGTACTACTTGATGAATGTGAAAGCATGCCTGAAGTTGATTCATCAATTTTCCATCTCCAAAAGCTTGAAGTTTTAAACGTGTCTGGGTGTACGTCGCTTAAGAGCATTTCCAGTAACACTTGTTCACCAGCCCTCCGTCAATTGAGTGCGATTAATTGCTTCAATCTCAAAGATCTCTCAGTCCCATTTGATTACCTTGATGGTTTAGGTTTGAGTTTAACAGGATGGGATGGGAATGAACTTCCATCATCATTATTGCATGCAAAAAATCTTGGAAACTTTTTCTTTCCAATCAGTGATTGTCTTGTGAATCTTACTGAAAACTTTGTAGATCGTATTTGTCTTGTGAAACAACGGAATTGTCAACAAGACCCTTTCATCACCTTGGATAAAATGTTTACTAGTCCTGGCTTCCAGAGTGTAAAAAACTTGGTCTTTGTTGATATTCCTATGTTGTCTGAAATCCCAGACAGCATCTCCTTACTGTCGTCATTAGAGAGTTTAATACTATTTGATATGGCCATTAAAAGCTTACCTGAAACCGTTAAGTATCTTCCCCAACTCAAATTCGTTGATATTCATGATTGTAAATTGCTTCAATCTATTCCGGCACTTTCACAGTTCATTCAAATTTTGGTTGTCTGGAATTGTGAATCTCTTGAGGAAGTGTTGAGTTCAACGCGTGAACCATATGATGAACCTAACGTTTGTTTTATCTCGCTCCTTAACTGCAAAAACATGGATTCACATTCATACCAAACAGTTTTGAAAGATGCTATGGATGGGATTGAACTTGTAAATATGCGGATAATTATTAAGTTTTTCCATGTGGATAATGAAGATGTCAAAAGACACCTATTATCTGACCGGGCTTCTTAA 2850 0.3726 MAFSSSHGASQKKYDVFISFRGEDTRTCFTSHLHAALCRTHLHTYIDYKIEKGDDVWSELVKAIKQSTLFLVVFSENYASSTWCLNELVEIMECSNKNEDDNVVVVPVFYHVDPSHVRKQTGSYGTALEKHMEQDNNGDKMMQNWKNALFQAANLSGFHSATYRTESDLIEDITRVVLGKLNQQCTNDLTCNFILDENYWSIQSLIKFDSAQVQIIGIWGMGGTGKTTLASILFQRFSFKYEGSCLFEKVTEVSKRHGINYACNKLLSKLLREDLDIDSPKLIPSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIVTTRDKHVLISGGIDKIYEVKKMNSRNSVKLFSMNAFDKVSPKDGYVELSKRAVDYANGNPLALKVLGSLLRCKSEIEWDCALAKLKKIPNNEIDSIFRLSYDELDDKEKDIFLDIACFFKGHERNSITKILNECGFFADIGISHLLDKALVRVDSKNCIQMHDLIQEMGKQIVREESHKNPGQRSRLCDPKEVYDVLKNNRGSKNVEAIFFDATQCTHVNLRPDTFEKMKNLRLLAFQDQKGVKSVSLPHGLGLLPENLRYFLWDGYPLKTLPPTFCLEMLVELSLTGSLVEKLWNGVLNVPNLEKIDLSGSTKLIECPNVSGSPNLKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCSPALRQLSAINCFNLKDLSVPFDYLDGLGLSLTGWDGNELPSSLLHAKNLGNFFFPISDCLVNLTENFVDRICLVKQRNCQQDPFITLDKMFTSPGFQSVKNLVFVDIPMLSEIPDSISLLSSLESLILFDMAIKSLPETVKYLPQLKFVDIHDCKLLQSIPALSQFIQILVVWNCESLEEVLSSTREPYDEPNVCFISLLNCKNMDSHSYQTVLKDAMDGIELVNMRIIIKFFHVDNEDVKRHLLSDRAS* 950
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1210 949 SUPERFAMILY L domain-like 488 861 - -
Mtr8g1210 949 Gene3D Ribonuclease Inhibitor 788 939 IPR032675 -
Mtr8g1210 949 Gene3D - 10 188 IPR035897 -
Mtr8g1210 949 ProSiteProfiles TIR domain profile. 12 181 IPR000157 GO:0007165
Mtr8g1210 949 SMART till_3 13 155 IPR000157 GO:0007165
Mtr8g1210 949 Pfam TIR domain 13 187 IPR000157 GO:0007165
Mtr8g1210 949 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 158 IPR035897 -
Mtr8g1210 949 SMART AAA_5 212 351 IPR003593 -
Mtr8g1210 949 Gene3D Ribonuclease Inhibitor 488 726 IPR032675 -
Mtr8g1210 949 Pfam NB-ARC domain 203 431 IPR002182 GO:0043531
Mtr8g1210 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 443 IPR027417 -
Mtr8g1210 949 Gene3D - 189 341 IPR027417 -
Mtr8g1210 949 Gene3D - 349 433 IPR042197 -
Mtr8g1210 949 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 837 IPR044974 GO:0006952
Mtr8g1210 949 PRINTS Disease resistance protein signature 215 230 - -
Mtr8g1210 949 PRINTS Disease resistance protein signature 290 304 - -
Mtr8g1210 949 PRINTS Disease resistance protein signature 384 398 - -
Mtr8g1210 949 PRINTS Disease resistance protein signature 674 690 - -
Mtr8g1210 949 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 837 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr8g1210 Mtr-Chr8 14770378 14774954 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1210 9 829 WRKY Transcription Factor Family AT4G12020 31.617 1.42e-94 327
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1210 - - mtr:MTR_8g038815 1875.52