LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1210	ATGGCTTTTTCTTCCTCTCATGGCGCATCTCAGAAAAAATATGATGTTTTCATCAGCTTTCGAGGCGAAGATACTCGAACTTGTTTCACAAGCCATCTTCACGCTGCTCTTTGCCGAACCCATTTACATACCTACATAGACTACAAGATCGAGAAAGGAGATGATGTTTGGTCAGAACTTGTTAAAGCAATCAAACAATCCACTCTTTTTCTTGTTGTGTTCTCGGAGAACTACGCGTCTTCAACATGGTGTTTGAACGAACTGGTTGAAATAATGGAGTGTAGTAACAAAAATGAAGATGACAACGTTGTTGTTGTTCCTGTGTTCTACCATGTTGACCCTTCACACGTGCGGAAGCAGACTGGGAGTTACGGCACTGCGTTGGAAAAACATATGGAGCAAGACAACAATGGTGATAAGATGATGCAAAATTGGAAGAATGCTCTTTTTCAAGCTGCTAATTTGTCTGGTTTTCATTCTGCAACATACAGGACTGAATCTGACTTAATTGAAGACATTACCAGAGTTGTATTAGGAAAATTAAATCAGCAATGCACAAATGATCTTACATGTAATTTTATACTTGATGAAAACTATTGGAGCATTCAATCATTAATAAAATTTGATTCAGCACAAGTTCAAATCATTGGAATTTGGGGTATGGGAGGCACAGGTAAGACAACCCTTGCTTCTATTCTGTTTCAAAGGTTCTCTTTCAAATATGAAGGCAGCTGCTTGTTTGAAAAGGTGACAGAAGTATCGAAAAGGCATGGAATCAATTACGCGTGCAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTGATATTGACAGTCCCAAACTAATACCATCTATGATCAGAAGAAGACTCAAAAGCATGAAATCTTTCATTGTACTAGATGATGTACATAATTCAGAACTTCTTCAAAACTTGATTGGAGTGGGACATGGTTGGCTAGGATCTGGTAGCACAGTCATCGTGACTACGAGGGATAAGCATGTGCTGATAAGTGGAGGAATCGACAAAATTTATGAAGTTAAGAAGATGAACTCCCGCAATTCCGTTAAGCTTTTTAGCATGAATGCTTTTGACAAAGTCTCGCCTAAGGATGGATATGTGGAGCTCTCAAAAAGAGCAGTTGATTATGCCAACGGAAACCCGTTAGCTTTGAAAGTATTGGGATCTTTACTTCGTTGTAAAAGTGAAATTGAATGGGACTGTGCATTAGCTAAACTGAAAAAAATTCCAAACAACGAAATTGATTCTATATTCAGATTGAGTTATGATGAATTGGATGATAAAGAGAAAGATATATTTTTGGACATTGCATGCTTTTTCAAAGGACATGAAAGAAATAGCATAACAAAAATATTAAATGAGTGTGGTTTCTTTGCTGATATTGGGATAAGTCATCTTTTAGACAAGGCTCTTGTGAGGGTTGACTCTAAAAATTGCATACAAATGCACGACTTGATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCACATAAGAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTACGATGTATTGAAAAATAATAGAGGATCTAAGAATGTTGAAGCCATATTTTTTGATGCTACTCAATGCACACATGTAAATTTAAGACCAGACACATTTGAAAAGATGAAAAATCTAAGATTGCTTGCTTTTCAAGACCAAAAGGGAGTTAAATCTGTAAGTCTTCCGCACGGTCTTGGTTTATTGCCAGAAAATCTGAGATATTTTCTATGGGATGGCTATCCATTGAAAACTCTGCCTCCAACCTTTTGTCTTGAAATGCTTGTGGAGCTTTCCTTGACTGGAAGCCTTGTGGAAAAACTTTGGAATGGAGTCCTGAATGTGCCCAATTTAGAGAAAATTGACCTGAGTGGTTCCACAAAACTGATAGAGTGTCCAAATGTGTCTGGTTCTCCGAATCTAAAATATGTACTACTTGATGAATGTGAAAGCATGCCTGAAGTTGATTCATCAATTTTCCATCTCCAAAAGCTTGAAGTTTTAAACGTGTCTGGGTGTACGTCGCTTAAGAGCATTTCCAGTAACACTTGTTCACCAGCCCTCCGTCAATTGAGTGCGATTAATTGCTTCAATCTCAAAGATCTCTCAGTCCCATTTGATTACCTTGATGGTTTAGGTTTGAGTTTAACAGGATGGGATGGGAATGAACTTCCATCATCATTATTGCATGCAAAAAATCTTGGAAACTTTTTCTTTCCAATCAGTGATTGTCTTGTGAATCTTACTGAAAACTTTGTAGATCGTATTTGTCTTGTGAAACAACGGAATTGTCAACAAGACCCTTTCATCACCTTGGATAAAATGTTTACTAGTCCTGGCTTCCAGAGTGTAAAAAACTTGGTCTTTGTTGATATTCCTATGTTGTCTGAAATCCCAGACAGCATCTCCTTACTGTCGTCATTAGAGAGTTTAATACTATTTGATATGGCCATTAAAAGCTTACCTGAAACCGTTAAGTATCTTCCCCAACTCAAATTCGTTGATATTCATGATTGTAAATTGCTTCAATCTATTCCGGCACTTTCACAGTTCATTCAAATTTTGGTTGTCTGGAATTGTGAATCTCTTGAGGAAGTGTTGAGTTCAACGCGTGAACCATATGATGAACCTAACGTTTGTTTTATCTCGCTCCTTAACTGCAAAAACATGGATTCACATTCATACCAAACAGTTTTGAAAGATGCTATGGATGGGATTGAACTTGTAAATATGCGGATAATTATTAAGTTTTTCCATGTGGATAATGAAGATGTCAAAAGACACCTATTATCTGACCGGGCTTCTTAA	2850	0.3726	MAFSSSHGASQKKYDVFISFRGEDTRTCFTSHLHAALCRTHLHTYIDYKIEKGDDVWSELVKAIKQSTLFLVVFSENYASSTWCLNELVEIMECSNKNEDDNVVVVPVFYHVDPSHVRKQTGSYGTALEKHMEQDNNGDKMMQNWKNALFQAANLSGFHSATYRTESDLIEDITRVVLGKLNQQCTNDLTCNFILDENYWSIQSLIKFDSAQVQIIGIWGMGGTGKTTLASILFQRFSFKYEGSCLFEKVTEVSKRHGINYACNKLLSKLLREDLDIDSPKLIPSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIVTTRDKHVLISGGIDKIYEVKKMNSRNSVKLFSMNAFDKVSPKDGYVELSKRAVDYANGNPLALKVLGSLLRCKSEIEWDCALAKLKKIPNNEIDSIFRLSYDELDDKEKDIFLDIACFFKGHERNSITKILNECGFFADIGISHLLDKALVRVDSKNCIQMHDLIQEMGKQIVREESHKNPGQRSRLCDPKEVYDVLKNNRGSKNVEAIFFDATQCTHVNLRPDTFEKMKNLRLLAFQDQKGVKSVSLPHGLGLLPENLRYFLWDGYPLKTLPPTFCLEMLVELSLTGSLVEKLWNGVLNVPNLEKIDLSGSTKLIECPNVSGSPNLKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCSPALRQLSAINCFNLKDLSVPFDYLDGLGLSLTGWDGNELPSSLLHAKNLGNFFFPISDCLVNLTENFVDRICLVKQRNCQQDPFITLDKMFTSPGFQSVKNLVFVDIPMLSEIPDSISLLSSLESLILFDMAIKSLPETVKYLPQLKFVDIHDCKLLQSIPALSQFIQILVVWNCESLEEVLSSTREPYDEPNVCFISLLNCKNMDSHSYQTVLKDAMDGIELVNMRIIIKFFHVDNEDVKRHLLSDRAS*	950

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1210	949	SUPERFAMILY	L domain-like	488	861	-	-
	Mtr8g1210	949	Gene3D	Ribonuclease Inhibitor	788	939	IPR032675	-
	Mtr8g1210	949	Gene3D	-	10	188	IPR035897	-
	Mtr8g1210	949	ProSiteProfiles	TIR domain profile.	12	181	IPR000157	GO:0007165
	Mtr8g1210	949	SMART	till_3	13	155	IPR000157	GO:0007165
	Mtr8g1210	949	Pfam	TIR domain	13	187	IPR000157	GO:0007165
	Mtr8g1210	949	SUPERFAMILY	Toll/Interleukin receptor TIR domain	4	158	IPR035897	-
	Mtr8g1210	949	SMART	AAA_5	212	351	IPR003593	-
	Mtr8g1210	949	Gene3D	Ribonuclease Inhibitor	488	726	IPR032675	-
	Mtr8g1210	949	Pfam	NB-ARC domain	203	431	IPR002182	GO:0043531
	Mtr8g1210	949	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	192	443	IPR027417	-
	Mtr8g1210	949	Gene3D	-	189	341	IPR027417	-
	Mtr8g1210	949	Gene3D	-	349	433	IPR042197	-
	Mtr8g1210	949	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	9	837	IPR044974	GO:0006952
	Mtr8g1210	949	PRINTS	Disease resistance protein signature	215	230	-	-
	Mtr8g1210	949	PRINTS	Disease resistance protein signature	290	304	-	-
	Mtr8g1210	949	PRINTS	Disease resistance protein signature	384	398	-	-
	Mtr8g1210	949	PRINTS	Disease resistance protein signature	674	690	-	-
	Mtr8g1210	949	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	9	837	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1210	Mtr-Chr8	14770378	14774954	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr8g1210	9	829	WRKY Transcription Factor Family	AT4G12020	31.617	1.42e-94	327

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1210	-		-	mtr:MTR_8g038815	1875.52