Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr8g1209 | ATGCATTCTCTCATGGACGAAGACGGCGATAATCCAATCCCCAACCTTGACGACGAAGTTCACGTTCATTTTACTGGAACGTTGTTGCTTGATGGTAAGAAGTTTGACTCTAGCAGCGACAGAGGAACAAGTACCTTCAGTTTCACGCTTGGACGAGGGCAAGTTATTAAAGGTTGGGGTGAGGGTATGAGAACAATGAGAAAAGGTGAAAAGGCCCTTTTCACTATTCCACCTGAGTTAGCTTATGGTAAATCTGGTCTTCCTCCAAATATTCCTCCTAATGCCACTCTACAATACGATGTTGAGCTACTGTCTTCGACCAGTTCAAAAGATATATGTGATATATGTATGGATGGAGGATTGTTTAAGGAGATACTCGATGAGGGGGAGAAATGGGAAAACCCCAAGGATCTTGATGAAGTGTTAGTTAAGTATGAAGCGCATCTTGATGATGGAACACTAGTAGCAAAATCTGATGGAGTGGAGTTCACAGTGAAGGAGGGTTTTTTTTGTCTTGCATTGTCAAAGGCTGTTAAGACTATGAAGAAGGGAGAGAATGTAGCATTGACTGTGAAGCCACAGTATGGATTTGGTGTGAAGGGCAAACCAGCTCATGGTGATGAAATTGCAGTTCCACCTAATGCAACATTGAAGATTAACCTTGAGTTGGTTTCTTGGAAGACTGTTTTTGAAGTAACCGATGACAAGAAGGTTATCAAAAAGATTCTCAAGGAAGGCGAAGGATACAAGTGTCCAAAAGATGGAGCTGCTGTAAAATTGAAACTTATTGGTAAGTTGCAAGATGACACTGTATTTTTGAAGAAGGGCCATGGCGATGAATTCACAACAGATGAAGAGCAAGTGATTGATGGGCTCGATAAAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCATTGTTGACTATTGCACCCGAGTATGCTTTTGGTTCATCTGAGTCTCAGCAGGAATTGGCAGTGGTCCCTCCTAATTCAACCTTGTATTATGAGGTTGAGTTAGTATCGTTCATAAAGATGACCCAGAATGGTTTTTCTTGTGTCCTATTGATTACAAGTATGCAAAGAGTAAAAGGTTTAAAAGGACAACAAAAAATGGTTTTTGGAAAGCTACTGGAAAGGACCGGAAGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAAACTCTTGTTTACTATAATGGTCGTGTTCCTGGTGTTAAAAGCAGCCGGGTGA | 1239 | 0.41 | MHSLMDEDGDNPIPNLDDEVHVHFTGTLLLDGKKFDSSSDRGTSTFSFTLGRGQVIKGWGEGMRTMRKGEKALFTIPPELAYGKSGLPPNIPPNATLQYDVELLSSTSSKDICDICMDGGLFKEILDEGEKWENPKDLDEVLVKYEAHLDDGTLVAKSDGVEFTVKEGFFCLALSKAVKTMKKGENVALTVKPQYGFGVKGKPAHGDEIAVPPNATLKINLELVSWKTVFEVTDDKKVIKKILKEGEGYKCPKDGAAVKLKLIGKLQDDTVFLKKGHGDEFTTDEEQVIDGLDKAVMTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTLYYEVELVSFIKMTQNGFSCVLLITSMQRVKGLKGQQKMVFGKLLERTGRLRLGVAIILLGLRKLLFTIMVVFLVLKAAG* | 413 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1209 | 412 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 236 | 346 | - | - | |
| Mtr8g1209 | 412 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 9 | 233 | - | - | |
| Mtr8g1209 | 412 | SUPERFAMILY | FKBP-like | 9 | 110 | - | - | |
| Mtr8g1209 | 412 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 138 | 227 | IPR001179 | GO:0003755 | |
| Mtr8g1209 | 412 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 | 9 | 233 | - | - | |
| Mtr8g1209 | 412 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 | 236 | 346 | - | - | |
| Mtr8g1209 | 412 | SUPERFAMILY | FKBP-like | 112 | 228 | - | - | |
| Mtr8g1209 | 412 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 250 | 340 | IPR001179 | GO:0003755 | |
| Mtr8g1209 | 412 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 14 | 104 | IPR001179 | GO:0003755 | |
| Mtr8g1209 | 412 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 133 | 224 | IPR001179 | GO:0003755 | |
| Mtr8g1209 | 412 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 255 | 343 | IPR001179 | GO:0003755 | |
| Mtr8g1209 | 412 | Gene3D | - | 111 | 227 | IPR046357 | GO:0003755 | |
| Mtr8g1209 | 412 | SUPERFAMILY | FKBP-like | 206 | 342 | - | - | |
| Mtr8g1209 | 412 | Gene3D | - | 228 | 345 | IPR046357 | GO:0003755 | |
| Mtr8g1209 | 412 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 17 | 107 | IPR001179 | GO:0003755 | |
| Mtr8g1209 | 412 | Gene3D | - | 3 | 110 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr8g1209 | Mtr-Chr8 | 14740017 | 14759045 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr8g1209 | 14 | 348 | Calmodulin-binding Proteins | AT3G25230 | 73.529 | 3.65e-170 | 486 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr8g1209 | K09571 | - | gmx:100803189 | 525.013 |