Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1190 ATGAATACATGTTCCTTGCTGATCCTCTTTTACTTCTCCCTTTGTTTCATTATTTCTCTTTCTCATGCTCTAAACAATGGTTTTAGTGTTGAACTCATCCACCGCGACTCCTCAAAATCACCACTATACCAACCTACACAAAACAAATACCAACATATTGTCAATGCCGCACGCCGTTCTATCAATCGTGCCAATCATTTCTACAAAACTGCCCTCACAAACACACCTCAATCAACTGTAATCCCCGATCATGGCGAGTATCTCATGACCTATTCAGTTGGTACCCCACCATTTAAGTTATATGGCATTGCTGATACAGGTAGTGACATTGTTTGGCTTCAATGCGAGCCTTGCAAAGAATGTTACAATCAAACAACTCCTAAGTTTAAACCATCAAAATCGTCAACTTACAAAAACATTCCATGTTCGTCTGACCTATGTAAATCTGGGCAACAAGGTGCCGTTTGTACCGATCAAAATTTTTGTGAATATAGTATTTCTTATGGTGATAATTCACAATCGAAAGGAAATCTTAGTGTTGATACTCTTACATTAGAGTCCTCCACTGGACATCCTATTTCATTTCCTAAAACTGTGATAGGATGTGGAACTGACAATACAGTGTCATTTGAAGGTGCAAGTTCTGGTATAGTTGGCCTTGGAGGTGGACCAGCATCTCTTATTACACAATTGGGATCATCAATTGATGCAAAATTCTCTTATTGTTTGTTGCCAAACCCGGTTGAGTCAAACACGACAAGCAAACTCAATTTTGGAGACACGGCTGTGGTTTCCGGGGATGGTGTTGTGTCAACCCCTATAGTGAAAAAGGATCCTATAGTTTTCTACTATTTGACATTGGAAGCATTTAGTGTTGGTAACAAAAGAATAGAATTTGAAGGGTCTTCAAATGGTGGTCATGAAGGTAACATCATAATTGATTCAGGTACAACGTTGACGGTTATTCCAACTGATGTTTATAATAATTTGGAATCAGCGGTGTTGGAATTGGTGAAACTGAAGCGTGTTAATGATCCAACCCGATTATTTAACCTTTGCTATAGCGTCACATCAGATGGATATGATTTTCCTATAATAACGACACATTTTAAAGGTGCGGATGTTAAGTTGCATCCTATTAGTACATTTGTTGATGTTGCAGATGGCATTGTTTGTCTTGCTTTTGCAACTACTTCTGCATTCATTCCTTCTGACGTCGTTTCCATCTTCGGAAACTTAGCTCAGCAGAATTTGTTGGTTGGTTATGATCTTCAACAAAAAATTGTGTCGTTTAAGCCTACTGATTGTAGCAAAGTGTAA 1320 0.3848 MNTCSLLILFYFSLCFIISLSHALNNGFSVELIHRDSSKSPLYQPTQNKYQHIVNAARRSINRANHFYKTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCKSGQQGAVCTDQNFCEYSISYGDNSQSKGNLSVDTLTLESSTGHPISFPKTVIGCGTDNTVSFEGASSGIVGLGGGPASLITQLGSSIDAKFSYCLLPNPVESNTTSKLNFGDTAVVSGDGVVSTPIVKKDPIVFYYLTLEAFSVGNKRIEFEGSSNGGHEGNIIIDSGTTLTVIPTDVYNNLESAVLELVKLKRVNDPTRLFNLCYSVTSDGYDFPIITTHFKGADVKLHPISTFVDVADGIVCLAFATTSAFIPSDVVSIFGNLAQQNLLVGYDLQQKIVSFKPTDCSKV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1190 439 Pfam Xylanase inhibitor C-terminal 283 432 IPR032799 -
Mtr8g1190 439 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 437 - -
Mtr8g1190 439 CDD pepsin_A_like_plant 86 436 IPR034161 -
Mtr8g1190 439 Gene3D Acid Proteases 264 439 IPR021109 -
Mtr8g1190 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
Mtr8g1190 439 ProSiteProfiles Peptidase family A1 domain profile. 87 432 IPR033121 -
Mtr8g1190 439 PANTHER OS07G0603500 PROTEIN-RELATED 7 437 - -
Mtr8g1190 439 Gene3D Acid Proteases 66 260 IPR021109 -
Mtr8g1190 439 Pfam Xylanase inhibitor N-terminal 87 260 IPR032861 -
Mtr8g1190 439 SUPERFAMILY Acid proteases 80 437 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1190 Mtr-Chr8 14549722 14551041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1190 68 439 Miscellaneous Gene Families AT1G44130 25.628 2.69e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1190 - - mtr:MTR_4g109760 535.413