Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1155 ATGGCTTCTTCTTCATCATCCTCCACTTCTCAATGGGTTTACGACGTGTTCCTCAGCTTCAGGGGGGAAGATACTCGTCGTAATTTTGTTGCTCATCTCAATGCAGCACTCTCTAATGCTGAAATCAACACTTACATCGATGATCGGATTCAAAAAGGGACAGATCTGGAACCCGAACTATTCCGAGCCATTGAAGACTCTCGTATTTCCATCGTCGTCTTCTCCGAAAACTACGTCCATTCTAGTTGGTGTCTTAAAGAGCTTGAACAAATCATGAAATGCCGCGTAAATTGTGGCCAGATTGTTGAGCCCGTTTTTTACCACGTTGAACCATCGGTTTTGCGTCATCAAGCAGGTGATTTTGGAAAAGCTCTGGAAGAAACTGCTAAAAGAAGTTCCTCAGAAGGGGAAAAGATGAATACTGTGTTGTCCACCTGGCAGATTGCACTAACTGAAGTTGCAAATATATCTGGTTGGGATACAAAAAATTTCAAGGATGACGTTGAACTAATTTCTCAAATTGTTAAAGACATTAAGAGAAAGCTAAAGAACAGATTATTGAATATTACCAAATTTCCAGTTGGATTAGATACCCATGTGCAACAAATTATTGCATTTATTAAAAATCAATCAAGCAAAGTTTGCTTGATAGGGATCTGGGGGATGGGTGGATCAGGTAAAACAACAACAGCCACAGCCTTCTACAACCAATTTCATGGGAAATTCGTGGTTCACAGATTCATTGAAAATATTAGAGAAGTTTGTGAAAAGGAAGGTAGAGGGAATATTCATTTAAAACAACAACTTCTTTTGGATAACATGAAAACAATTGAGAAGAGATTTATGAGGGAAAAGGCACTCGTTGTACTCGATGATGTGAGCGCATTAGAGCAAGTAAATGCCCTATGTGGAAAACATAAATGTTTTGGTACCGGGAGTGTATTGATTGTTACATCCAGGGATGTACGCATACTTAAGTTACTTGAAGTTGACCATGTCTATAGCATGACGGAAATGGACGAATATGAGTCCCTCGAGCTTTTCAATTTACATGCTTTTAGAAAGTCAAGTGCAAAAGAAGACTTCAATCAACTGTCAAGAAGCATAATTGATTATTGTGGAGGATTACCACTAGCTCTTGAAGAAATTGGATCTTACTTATTTGATAGGACAAAACAACAGTGGAAAAGTACACTATCAAACTTGAGGAGAATTCCTAATGATAAAGTGCAAAAAAAACTGAAAATAAGCTATGATGGTTTAGATTGTGATTCCGAAAGGGGTATATTTCTTGACATTTGTTGTTTCTTTATCGGAAAGAAGAGAGCCTATGTTTCAGAGATTCTAGATGGTTGTGGACTTAATGCTGATATGGGAATAACTATCCTCATAGAGCGGAGCCTTCTAAAAGTCGAAAAGAATGATAAACTTGGAATGCATGGTTTACTACGAGACATGGGAAGAGAGATTGTTTGTAAAAGATCAGAAGAGGAGCTTGGGAAGCGTAGTCGATTGTGGTCTGATGAGGATGTACATGATGTTTTGAATCAAAATTGTGGAACAAAATTTGTGGAAGGATTGGTTTTGAAGTCCCAAAGCACCGAAAATGTTAGCTTCAATGCTGATTCTTTCAAGAAGATGAACAATTTGAGACTTTTGCAACTTGATCATGTTGATCTTACTGGAGACTTTTATCAGGAAAATCTAGCTGTTTTTGAGTTAAAACACAGCAATATTAAACTGGTCTGGAATGAAACTAAGTTGATGAATAAGCTGAAAATTCTCAATCTCAGTCATTCCAAGCACTTGACAAGCACCCCAGACTTTTCAAAATTACCAAATCTAGAAAAGCTCATTATGAAGAACTGTCCAAACTTGTCCAAGTTACACCACTCGATTGGGGATCTCAAGAATATTCTACTGCTCAATCTGAAGGACTGTACAAGTCTTGCCAGTCTCCCAGAGGTGATATATCAGTTGAAATCATTGAAAACTCTAATCTTTTCTGGTTGTTCAAAGATTGACAAGTTGGAAGAAGACATAGTCCAGATGGAATCCTTGACAACACTGATCGCAAAAGATACAGGTGTAAAAGAGATGCCATACTCAATACTAGGATTGAAAGGCATCGCATATATATCCCTATGTGGATGTGAAGGATTGTCATTTGAAGTTCTTCCTTCTGTCATTTGGTCTTGCGTGCCACCAACCATGAATTCTTCACCTCGTATTTCCCCATTTGATAACCAATACGATGTAGATTTTACTGAATCGGAAACATCACAAATCTCAAACCTTCCTTTGAGACCGCTTTTGATTGGAATAGGAAGTTGCCACATTGTCATTGATATTCTTAGCAGGAGCATATCACAGGGATTAACAAGCAATGATTCAGGCCATTTTTCTCTTCCGGTCGGTGACAATTATCCTTCTTGGTTAGCCTATAGATGTGATGGACCTTCAACACAATTTCACGTTCCTGAGAATATTGATTGTCACTTGAAGGGAATAATCTTATGTGTTGTTTATTCATCAGCACCTGAAAACATGGGAGCCGAATGTCTTATTAGTGTCTTGATTGTTAATTACACAAAATTCACCATCCAGATATACAAGCGAGGTACATTGAGGTCCTTTAATGATGAAGATTGGAAGAATGTAACATCAAATCTTGGACCAGGTGACAAAGTGGAGATTTTTGTACTTTTTGGGTGTGGATTGATTGTTAAGGAGACAGCTGTCTATCTACTTTATGGTCAGTCAATTACTACGGAATTCGAACAATCTATTTTCATGGAAGTTGAGCCATCAACTAACATGGAAATGGAGCCATCAGCGGAATTGAACGTGCAGCCGTCACCTAAAGTGAGCATGCAACCATCACCTAACGTGAAAGTGGAGGCATTAATTACTATGGAAATTGAACAATCAATTACTGTGGAAGTTGAGTCATTGACTAACATGGAAATGAAGACATCGGAGGAAGTGAACTTGCAACAGTCACCTAAAGTGGACGCGGAAGCATCAATTACTATGGAAATTGAACAGTCAATTACTATGGAAGTTGAGTCCTCAACTATCGTGGAAATGGTGCCGTTAGCCGAAGTAAACGTGCGTCCGCCACCTGAAGTGGACATGCAACCTTCACCAAAGCCGAATAATAGTAGCTTTACAAGACTTGCAAAAAGAATAGGTGCATGCTTATGCTTCAACCACCAGAGTTAA 3225 0.3864 MASSSSSSTSQWVYDVFLSFRGEDTRRNFVAHLNAALSNAEINTYIDDRIQKGTDLEPELFRAIEDSRISIVVFSENYVHSSWCLKELEQIMKCRVNCGQIVEPVFYHVEPSVLRHQAGDFGKALEETAKRSSSEGEKMNTVLSTWQIALTEVANISGWDTKNFKDDVELISQIVKDIKRKLKNRLLNITKFPVGLDTHVQQIIAFIKNQSSKVCLIGIWGMGGSGKTTTATAFYNQFHGKFVVHRFIENIREVCEKEGRGNIHLKQQLLLDNMKTIEKRFMREKALVVLDDVSALEQVNALCGKHKCFGTGSVLIVTSRDVRILKLLEVDHVYSMTEMDEYESLELFNLHAFRKSSAKEDFNQLSRSIIDYCGGLPLALEEIGSYLFDRTKQQWKSTLSNLRRIPNDKVQKKLKISYDGLDCDSERGIFLDICCFFIGKKRAYVSEILDGCGLNADMGITILIERSLLKVEKNDKLGMHGLLRDMGREIVCKRSEEELGKRSRLWSDEDVHDVLNQNCGTKFVEGLVLKSQSTENVSFNADSFKKMNNLRLLQLDHVDLTGDFYQENLAVFELKHSNIKLVWNETKLMNKLKILNLSHSKHLTSTPDFSKLPNLEKLIMKNCPNLSKLHHSIGDLKNILLLNLKDCTSLASLPEVIYQLKSLKTLIFSGCSKIDKLEEDIVQMESLTTLIAKDTGVKEMPYSILGLKGIAYISLCGCEGLSFEVLPSVIWSCVPPTMNSSPRISPFDNQYDVDFTESETSQISNLPLRPLLIGIGSCHIVIDILSRSISQGLTSNDSGHFSLPVGDNYPSWLAYRCDGPSTQFHVPENIDCHLKGIILCVVYSSAPENMGAECLISVLIVNYTKFTIQIYKRGTLRSFNDEDWKNVTSNLGPGDKVEIFVLFGCGLIVKETAVYLLYGQSITTEFEQSIFMEVEPSTNMEMEPSAELNVQPSPKVSMQPSPNVKVEALITMEIEQSITVEVESLTNMEMKTSEEVNLQQSPKVDAEASITMEIEQSITMEVESSTIVEMVPLAEVNVRPPPEVDMQPSPKPNNSSFTRLAKRIGACLCFNHQS* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1155 1074 Pfam TIR domain 14 188 IPR000157 GO:0007165
Mtr8g1155 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 159 IPR035897 -
Mtr8g1155 1074 SUPERFAMILY L domain-like 479 733 - -
Mtr8g1155 1074 Gene3D - 338 422 IPR042197 -
Mtr8g1155 1074 PRINTS Disease resistance protein signature 216 231 - -
Mtr8g1155 1074 PRINTS Disease resistance protein signature 280 294 - -
Mtr8g1155 1074 PRINTS Disease resistance protein signature 373 387 - -
Mtr8g1155 1074 PRINTS Disease resistance protein signature 587 603 - -
Mtr8g1155 1074 ProSiteProfiles TIR domain profile. 12 182 IPR000157 GO:0007165
Mtr8g1155 1074 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 919 - -
Mtr8g1155 1074 SMART till_3 13 156 IPR000157 GO:0007165
Mtr8g1155 1074 Gene3D - 184 333 IPR027417 -
Mtr8g1155 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 433 IPR027417 -
Mtr8g1155 1074 Gene3D - 11 183 IPR035897 -
Mtr8g1155 1074 Pfam NB-ARC domain 197 418 IPR002182 GO:0043531
Mtr8g1155 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 919 IPR044974 GO:0006952
Mtr8g1155 1074 Gene3D Ribonuclease Inhibitor 520 744 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1155 Mtr-Chr8 14162518 14167335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1155 14 727 WRKY Transcription Factor Family AT4G12020 28.518 3.55e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1155 - - mtr:MTR_8g037235 2126.29