Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1154 ATGGCTTTTTCTTCATCTTCTTCACCTTTACAATTAAATCCTGAATGGATATATGACGTGTTCATCAATTTTAGATCAAAAGACACTGGCAAAAGTTTCGTTTCTCATCTCTATGCTGTCCTTAAAAAAGCCAGAATCAAACACATCGACATCGATCAGCTTCACGATGGAGTCTTGCTAGAGTCAGAACTATTTGAAGCAATAAAAATGTCCCGTATGTCTATCCTTGTTTTCTCCAAAAACTACACTGAATCTAGTTGGTGCCTCGACGAGCTGCAAAGAGTCATGGAGTGTCGCAGAACTCATGGGCAGATGGTTGTCCCTCTATTTTATGATGTTACTCCATCGGATGTGCGCTACCAGAAGGGTCATTTTGGAAAAAAACTTAGAGCTGCTGCAAAAAGAATCTCAGGAAAGGGAATGAGGGAACATGTGGTATCTGGTTGGAGGGTTGCACTCTCAGAAGCTGCTAACATCTCAGGTTGGGATGCCTCCAATTTCAGGAATGAAGCTGAACTACTGCGGAAAATTATTGAAGACGTCTTGAGAAAGCTAAAGGGCAGCCGCAGATTATTGTCTATTCCGGAATTTCCAGTTGGATTGGATACCCATGTGCAAGAAGCGATCCAGATTATTGAAAATCAATCAAACAATGTTTGCTCTATGGGGATCTGGGGTATGGGTGGATCGGGGAAAACAACCACAGCCAAAGCCATCTACAATCAAATTTATCACACATTTTTGTATCACCATTTCATTGCGAATATTAGACAAGTTTGTGAAAGAGGTGATGAAGGGATTATTCATTTACAAGAACAGCTTCTTGCAAATGTCTTGGGATTTAATGAGAAGATATATAACACTGCATCCGGGATAACCACAATTGAGGACAGACTTAGTGGGATAAAGGCACTTATTGTACTCGATGACGTAAGCACACTTGAGCAAGCAGAAGCCCTATGTGGAAACAGTAAATGGTTCGGTTCAGGAAGCGTATTGATCGTTACATCTAGGGATACACGCATACTTAGGTTACTTGAAGTTAAGTATAGGCTTACAATGAAGGAAATGGTCGAAGGTAAGTCTCTTGAGCTTTTTTGTTGGCATGCTTTTAGACAACCTAGTCCAATAGAAGACTTCAGTGAACTCTCAAGGAGCGTAGTTGCTTATTGTGGAGGATTACCACTGGCTCTTGAAATCATTGGGTCTATGTTACATTACAGGACAAAACAAGAATGGAGAAGTGTACTGTCAAAATTTGAGAAAATTCCCCATTATCTAATGCAGCAGATACTGAAAATAAGTTATGATGGTTTAATGGATGATATGGTAAAGGCTGTATTTCTTGACATATGTTGTTTCTTTATTGGTGAGGACAAAGCCTATGTTACAGAGATACTAAATGGCTGTGGACTTTGTGCTGATATTGGAATAGCTGTCCTCATAGAGCGGAGCCTCTTAAAAGTTGAGGACAATAACACCCTTGGAATGCATAAGTTAATAAGAGACATGGGAAGAGAAATTGTTCGTGAAAGTTCAGCAAAAGAGCCAGGGGAGCGTAGTCGATTGTGGTTTCATGACGATATACACGATGTTTTGACAGAAAATACTGGAAGGAAAAATGTAGAGGGGTTGGTTTTGAAGTCGCAAAGAACTGGCAGAGTTTGCTTCAGTACTGAATCTTTCAAGAGGATGAAGGACCTTAGACTTCTGAAACTTGATCGTGTTGACCTCACTGGAGATTATGGTTACCTTTCTAAAGAACTGAGGTGGGTCCATTGGAAAGGATTTACCTTCAACTATATACCTGATGACTTTCATCAAGGAAATCTAGTTGTTTTTGAATTAACACACAGCAATATTAAACACGTATGGAACGAAACCAAGGTGCTGGTGAATCTAAAAATTCTCAATCTCAGTCATTCAATTTACTTGGAAAGCTCCCCAGACTTTTCAAAATTACCCAATCTTGAAAAGCTCATCATGAACGATTGTCCATGTTTGTCTGAGATACACCCTTCCATTGGAGATCTCAATAATATTCATCTGATAAATTTGAAGAACTGTATAAGTCTTAGCAAGTTTCCAAAGAATATCTTTAAGTTGAAATCATTGAAGACTCTCATCCTTTTAGGTTGTACGAAGATTGGCTCGTTGGAAAAAGACATAGTGCAGATGGAATCCTTGACAGAACTGATTACAAATAATACACTTGTAAAAGAAGTGGTTTTTTCAAAACATAGAAGTGTTTCGGTACATTGCCAATCAGAGATTCATCTGAAAGAAGTATTAAGAAGATTTCTTGAAGGTCTATACGGTGCAGGTCTCACTAAAATTGGAACATCGCATGCATCACAAATTTCGGATCTTTCCTTGAGATCACTTTTGATTGGAATAGGAAAGAGCATATCACAGGGATTAACAACCAATGATTCTGGAGATTTTTCCCTTCCGGGGGACAATTACCCTTCTTGGTTAGCCTATACAGGTGAAGGATCTTCAGTAAATTTTCAAGTACCTGAGGATAGTGATTGCTGCTTGAAGGGAATAACTTTATGTGTTGTTTATTCATCAACACCTGAAAACATGGTAGCCGAATGTCTTAACGGTGTCTTAATCACTAATTACACAAAATGCACAATCCAAGCATACAAGAGAGACACATTATCCTCTTTTAACGATGAAGATTGGCAAGGTGTAGTGTCAAATTTAGGTGTTGGTGACAAGGTGGAGATAATTGTAGTTTTTGGGGACGGGTTGATTGTTAAGAAGACAACTGTCTATCTTATATATGACCAGTCAATTACTATAGAAGTTGATACTGATGAGAAAGATGCTTTGAAGAATGATGTTGATGCCAAGTCCAAAGGTGGTCCCTCAAGGTGTGATAATCAAAGAGATGTGGATGAAGCATGTAAAAGACACAAAGAAATTCTAAATCAATCAGAGGATGCAGATTATAAAGAGGCTTTGGTGAATGGTGTTGATGTCAACAAAAGGATGGCTGAGCAAATTCCATATGCTGTTGCTGAAAGCCTCTTTAACAGGTTGACTTCGGCAGCCTTTCGTGAACTTGGACAAGTTTTTGGTGTTATGGATGAGTTGGAAAGACTTAAGAACTCTGTTGAATGCGTAAGAGTTGTGCTCCTTGACGCCCAGGATAAACAGGAACAAAATTTTGTTGTACAGAATTGGATAAGAAGGCTCACAGATGTGCTTCATCTTGCAGATGACTTGCTAGATGAATTTATTATTGAAGGTATGAGATACAAAGTGGATGCAGGTGATAATAACCGAGTGACATGGATTCATTCATCTTCTTCAAGCAATTATTTTCTACACCAAAAAATGGCTCCTGAAATTGAAAAAGTACAAAAAAAGTTTGATGTTGTGCTAGAACAAATGTCTAAGTTGAATTTAAGCTCAAAAGTTCCAGTGGTTAAGCAAACTGACAGTTTAAGGAACAAATCTATCTCTTTTTTGTTAGAATCAAACATCATGGGAAGAGAAGATGATAAAAAGGAGATTATAAATCTCTTGACACAACCACATGGAAATATCTCGTCAATTGTTATTGTAGGTATTGGAGGTATTGGCAAGACAACTCTTGCTCGATTCGTATATAATGATGTGGAAGTGCAAAAGCATTTTGAAAAGAAAATGTGGGTATGTGTATCTAGTAACTTTGATGTCAAGACCATTGTGAAGAAAATGTTGGAGTCATTAATCGATCGCAAAATTGATGATAAGTTATCATTTGAATACATACAACAGAAACTTCATGAAAATTTAACTGGTGAAAGGTACTTGTTAGTCTTGGATGACATTTGCAATGCTAGTCATGAAAAATGGACTCAATTGAGAACTTATTTGATGTGTGGTGCTGAAGATAGTAAGGTTTTAATGACAAGGCGTAGTGCAGTTGTATCAGAGAGACTTGAAGCAAGCGAGCTCTATGTTTTGAGTGGTTTGACTCTAGATGTATCTTGGAGTATGTTAAAGAAAATTATATTTGGGAAAGAACTCAGTGTAGTGAATCTACAACTTGAATCAATTGGTATAAAAATAGCAGAAAAGTGCATGGGAGTTCCACTAGCAATTAGAACTTTGGGAGGCTTACTGCAAAGGAAAAGTGAAGAAAGGGAATGGATCGATGTCTTACAAGGTGACTTTTGGGAATTATGCGAAGACAAAGAAAGCATCTCGTCAATCCTGAAATTTAGTTACCAAAGTTTGTCGCTTCAATTGAGACAATGTTTTGCTTATTGCTCTTTATATCCCAAGGATTGGGAAATTGAGAAGGATGCGTTGATTCAACTTTGGATGGCACAGGGTTATCTTGAATGCACAGATGAAAAACAACTCATGGAAGATGCCGGTAACGAATTTGTGAAGATTTTGTTGATAAAGTCATTTTTCCAAGATGCAAAAGTGGGTGGAGATGGAGATATAGTTAGTTTCAAAATGCATAATTTAATGCATGATCTTGCAATGAAAGTAGCTGGCAATGATTGTTGTTACTTGGATAGTGAGGCAGAAAGATGTGTACAAAAACCCATGCATGTATCGTTGAAACCCAGTGCAGTTCATTTGCTGGACTCATTAGATGCAAGCAGGTTGCAAACTTTGATTTTTCTGTCTTCCAATGAGGAGGAGGAATTGAATGGGGTTGAATTGTCAGTTATTTTAAATTTTGAACACTTGCGTGTCTTGAAGCTGTCATACTGTTGTTTAACCAAGTTGTCTGGTTCAATTGGAAAATTGAAACATTTAAGGTATCTTAACTTATCGCACTGCAGACGACTGGGAAGTCTTCACAAATCCATTAGCAGCCTTGTTTTCTTACAAACACTAATATTGGCACCTAATGAAAAGGTGGAGTTTTCGACATTGGTTGTATCAAAATTAATCAATTTGAGAAACCTTCACATCTCTGATTGGGAAGCCTCCAGAGATGAGACACCATCTGAATTTGTAAACTTGAGCGTTTGGCAATATGAAGGGATGGTTTTTTCAAACTGGCTCTCACCACTCACAAATATTGTTAAAATATCTTTCTTTTTGTGCGGAAGTCTGCAGTATCTCCCACCGTTGGAGCGTCTCCCATTCCTTAAGTCACTTCATATAAGTTTCCTTGAAGAACTGGAGTACATATATTATGAACAAGATTTTACTTCAGCGTTCTTTCCATCTTTGGAGAGCCTCTCCTTGCAGTTTTGTTACAAGTTGAAGGGATGGTGGAGGATTGGAGATGATTTCAACAACTGTTCACAAAATCTCTCATTGCCTCCCTTTCCTCGCCTTTGTCAATTATCAATCATAGGATGTCTGATGTTGACTTTCATGCCCACCTTTCCAAATCTTGAGAACGGGTTGGAATTGTACAATAGTAGGGCGGAAACATTGATAGCAACACTGAACACAGCAGCAGTAGAAAGAATGAATGACTTCCCTCCTCTTTCCATGCTCAAATCCTTGCACATTGATGGAGTTAGACTGGATGTGAAAAGTATCCCAAATGTTTGGATGAAAAATCTTACTTCTCTCCAGCTTCTTCAAATTAATTGGTTTTCACGCCAAGCATTTCAGCAAATCGAAACCTGGTTTAAAGATGATCTAAAGTACCTTCCATCTCTACAAACAATTGCCTTTCATAATTGTGAAGACCTAGAGGCATTGCCGGATTGGATATGCAACCTCTCATCGCTTCAGCATCTTAGGGTGTATGACTGCATAAATTTGGCATCACTGCCTGAAGGAATGCTCAATCTAACCAACTTACAGACCCTAGAAATCATCGGATGTCCCATCTTAGTTGAAGAGTGCCAGACACAGACAGGTGAAACTTGGGATAAAACTGCTCATGTACCAAAGATAATCTTATCATCTCTTCATTAA 5898 0.3827 MAFSSSSSPLQLNPEWIYDVFINFRSKDTGKSFVSHLYAVLKKARIKHIDIDQLHDGVLLESELFEAIKMSRMSILVFSKNYTESSWCLDELQRVMECRRTHGQMVVPLFYDVTPSDVRYQKGHFGKKLRAAAKRISGKGMREHVVSGWRVALSEAANISGWDASNFRNEAELLRKIIEDVLRKLKGSRRLLSIPEFPVGLDTHVQEAIQIIENQSNNVCSMGIWGMGGSGKTTTAKAIYNQIYHTFLYHHFIANIRQVCERGDEGIIHLQEQLLANVLGFNEKIYNTASGITTIEDRLSGIKALIVLDDVSTLEQAEALCGNSKWFGSGSVLIVTSRDTRILRLLEVKYRLTMKEMVEGKSLELFCWHAFRQPSPIEDFSELSRSVVAYCGGLPLALEIIGSMLHYRTKQEWRSVLSKFEKIPHYLMQQILKISYDGLMDDMVKAVFLDICCFFIGEDKAYVTEILNGCGLCADIGIAVLIERSLLKVEDNNTLGMHKLIRDMGREIVRESSAKEPGERSRLWFHDDIHDVLTENTGRKNVEGLVLKSQRTGRVCFSTESFKRMKDLRLLKLDRVDLTGDYGYLSKELRWVHWKGFTFNYIPDDFHQGNLVVFELTHSNIKHVWNETKVLVNLKILNLSHSIYLESSPDFSKLPNLEKLIMNDCPCLSEIHPSIGDLNNIHLINLKNCISLSKFPKNIFKLKSLKTLILLGCTKIGSLEKDIVQMESLTELITNNTLVKEVVFSKHRSVSVHCQSEIHLKEVLRRFLEGLYGAGLTKIGTSHASQISDLSLRSLLIGIGKSISQGLTTNDSGDFSLPGDNYPSWLAYTGEGSSVNFQVPEDSDCCLKGITLCVVYSSTPENMVAECLNGVLITNYTKCTIQAYKRDTLSSFNDEDWQGVVSNLGVGDKVEIIVVFGDGLIVKKTTVYLIYDQSITIEVDTDEKDALKNDVDAKSKGGPSRCDNQRDVDEACKRHKEILNQSEDADYKEALVNGVDVNKRMAEQIPYAVAESLFNRLTSAAFRELGQVFGVMDELERLKNSVECVRVVLLDAQDKQEQNFVVQNWIRRLTDVLHLADDLLDEFIIEGMRYKVDAGDNNRVTWIHSSSSSNYFLHQKMAPEIEKVQKKFDVVLEQMSKLNLSSKVPVVKQTDSLRNKSISFLLESNIMGREDDKKEIINLLTQPHGNISSIVIVGIGGIGKTTLARFVYNDVEVQKHFEKKMWVCVSSNFDVKTIVKKMLESLIDRKIDDKLSFEYIQQKLHENLTGERYLLVLDDICNASHEKWTQLRTYLMCGAEDSKVLMTRRSAVVSERLEASELYVLSGLTLDVSWSMLKKIIFGKELSVVNLQLESIGIKIAEKCMGVPLAIRTLGGLLQRKSEEREWIDVLQGDFWELCEDKESISSILKFSYQSLSLQLRQCFAYCSLYPKDWEIEKDALIQLWMAQGYLECTDEKQLMEDAGNEFVKILLIKSFFQDAKVGGDGDIVSFKMHNLMHDLAMKVAGNDCCYLDSEAERCVQKPMHVSLKPSAVHLLDSLDASRLQTLIFLSSNEEEELNGVELSVILNFEHLRVLKLSYCCLTKLSGSIGKLKHLRYLNLSHCRRLGSLHKSISSLVFLQTLILAPNEKVEFSTLVVSKLINLRNLHISDWEASRDETPSEFVNLSVWQYEGMVFSNWLSPLTNIVKISFFLCGSLQYLPPLERLPFLKSLHISFLEELEYIYYEQDFTSAFFPSLESLSLQFCYKLKGWWRIGDDFNNCSQNLSLPPFPRLCQLSIIGCLMLTFMPTFPNLENGLELYNSRAETLIATLNTAAVERMNDFPPLSMLKSLHIDGVRLDVKSIPNVWMKNLTSLQLLQINWFSRQAFQQIETWFKDDLKYLPSLQTIAFHNCEDLEALPDWICNLSSLQHLRVYDCINLASLPEGMLNLTNLQTLEIIGCPILVEECQTQTGETWDKTAHVPKIILSSLH* 1966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1154 1965 Pfam Rx N-terminal domain 1011 1098 IPR041118 -
Mtr8g1154 1965 Gene3D - 1010 1123 - -
Mtr8g1154 1965 Gene3D - 1324 1408 IPR042197 -
Mtr8g1154 1965 Gene3D - 357 440 IPR042197 -
Mtr8g1154 1965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 451 IPR027417 -
Mtr8g1154 1965 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1157 1415 - -
Mtr8g1154 1965 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 930 - -
Mtr8g1154 1965 Gene3D - 1409 1500 IPR036388 -
Mtr8g1154 1965 SUPERFAMILY L domain-like 1488 1794 - -
Mtr8g1154 1965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 930 IPR044974 GO:0006952
Mtr8g1154 1965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1157 1415 IPR044974 GO:0006952
Mtr8g1154 1965 SUPERFAMILY L domain-like 514 741 - -
Mtr8g1154 1965 Pfam TIR domain 18 189 IPR000157 GO:0007165
Mtr8g1154 1965 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Mtr8g1154 1965 Gene3D Ribonuclease Inhibitor 1788 1952 IPR032675 -
Mtr8g1154 1965 Gene3D Ribonuclease Inhibitor 526 753 IPR032675 -
Mtr8g1154 1965 Gene3D - 15 187 IPR035897 -
Mtr8g1154 1965 Gene3D - 1148 1318 IPR027417 -
Mtr8g1154 1965 PRINTS Disease resistance protein signature 221 236 - -
Mtr8g1154 1965 PRINTS Disease resistance protein signature 298 312 - -
Mtr8g1154 1965 PRINTS Disease resistance protein signature 391 405 - -
Mtr8g1154 1965 PRINTS Disease resistance protein signature 700 716 - -
Mtr8g1154 1965 Pfam NB-ARC domain 1169 1410 IPR002182 GO:0043531
Mtr8g1154 1965 Pfam NB-ARC domain 203 440 IPR002182 GO:0043531
Mtr8g1154 1965 SMART till_3 17 159 IPR000157 GO:0007165
Mtr8g1154 1965 CDD RX-CC_like 1007 1127 IPR038005 -
Mtr8g1154 1965 Gene3D - 188 352 IPR027417 -
Mtr8g1154 1965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1151 1423 IPR027417 -
Mtr8g1154 1965 Gene3D Ribonuclease Inhibitor 1522 1787 IPR032675 -
Mtr8g1154 1965 SUPERFAMILY RNI-like 1729 1938 - -
Mtr8g1154 1965 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 162 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1154 Mtr-Chr8 14141227 14154561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1154 18 745 WRKY Transcription Factor Family AT4G12020 28.877 2.44e-70 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1154 - - mtr:MTR_8g037220 3898.59