LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr8g1151	ATGAATGAGAATGGTAATGCTAATGAACCCAACAAGAAGTGGAAATTTCCTTTCTTAGTTTTCTTCAATGATGCAAGACTTATTTTCAAGTTGGATGCACTTTCAAAGGAGATATTAGGGATTGCAATACCCTCTGCATTAGCTGTTGCTGCTGATCCTATTGCTTCTCTTATTGACACTGCATTCATAGGCCATTTGGGTCCCGTGGAACTTGCTGCTGCTGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAAGATCACCATATTTCCTCTTGTTAGTATTACAACTTCCTTTGTAGCTGAGGAAGATACTATCAAAAGGATGAATATCAAAGCAGCTGAAAATGATAAGAGTAAATTAACTGAAGTAACACCTGAGAGTGATGTGGTTCAAGACATAGAGAAAGGGACACCCAAAGAGAGTAATAAGGCTCAAAAAGAATCTGTGGTAGGACACAATGAAACAAATGGTACACTTGGGAACAATGATAAGACTAATGGAGTTGCAGTGATGAATAATGAACAAGAACCCCATTTACTATCCTCAGATTCTAGGAGCAGTAAGATTAAGGAGATAGTTGTGAAGAAGAAGAAGAGACACATTGCTTCTGCATCAACAGCACTACTCTTTGGCTCAATTCTTGGTCTCCTACAAGCTTCAGTCCTTATATTTGGAGCTAAACCTCTATTATATGTGATGGGTGTAAAACATGGCTCTCCAATGCTAAAACCAGCAGTGAAGTATTTGACATATAGATCATTTGGTGCTCCTGCGGTTCTTCTCTCATTGGCAATGCAAGGAATATTTCGAGGATTTAAGGACACAACAACTCCTTTATATGTCATTGTTGCGGGATATTCATTGAATGTGTTATTGGAGCCATTACTTATTTTTAAATTGAAAATGGGCATAAAAGGAGCAGCAATTGCACATGTTATCTCTCAGTACATGATGGCATTTACCCTCTTCTTCATATTAATGAAAAAAGTGTATCTCCTACCTCCAAGAATAAAGGATCTTCAGATTTTCAGGTTTCTTAGAAATGGAGGTCTGTTGATGACAAAGGTAATAGCAGTAACATTCTGTGTGACTTTAGCAGCAAGTTTGGCTGCAAGGTTAGGTTCAATTCCCATGGCTGCCTTTCAACCTTGCCTACAAGTTTGGTTAGCATCCTCCCTTTTTGCTGATGGTTTGGCTATAGCTGTACAGGCAATCCTAGCTGGTTCTTTCGCGGAGAAAGACTGTAACAAGACAACAGCAGCTGCGACGAGGACTCTACAATTCGGTTTTATTTTAGGGGCGGGACTCTCTCTTATTGTTGGATTTGGTTTATACTTTGGAGCCGGAATCTTTTCCAAAAACCTTCAAGTTATACACTTTATCCGAATAGGTGCCCCGATTGTAGCTGCTACTCAACCAATCAATACATTAGCCTTTGTCTTTGATGGTGTAAACTATGGAGCTTCTGATTTTGCATATGCTTCATATTCCTTGGTTACAGTGTCATTGGTAAGTGTTGGTGTAGAATTTCTTCTTTACAGGAGCAACCAATTCATTGGGATATGGATTGCACTATCCATCTATATGACTCTTCGCATGTTGGCCGGTGTATGGAGGATGGGAACAGGTACAGGACCTTGGAGCTATCTCAGAGGATAA	1662	0.3971	MNENGNANEPNKKWKFPFLVFFNDARLIFKLDALSKEILGIAIPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASKITIFPLVSITTSFVAEEDTIKRMNIKAAENDKSKLTEVTPESDVVQDIEKGTPKESNKAQKESVVGHNETNGTLGNNDKTNGVAVMNNEQEPHLLSSDSRSSKIKEIVVKKKKRHIASASTALLFGSILGLLQASVLIFGAKPLLYVMGVKHGSPMLKPAVKYLTYRSFGAPAVLLSLAMQGIFRGFKDTTTPLYVIVAGYSLNVLLEPLLIFKLKMGIKGAAIAHVISQYMMAFTLFFILMKKVYLLPPRIKDLQIFRFLRNGGLLMTKVIAVTFCVTLAASLAARLGSIPMAAFQPCLQVWLASSLFADGLAIAVQAILAGSFAEKDCNKTTAAATRTLQFGFILGAGLSLIVGFGLYFGAGIFSKNLQVIHFIRIGAPIVAATQPINTLAFVFDGVNYGASDFAYASYSLVTVSLVSVGVEFLLYRSNQFIGIWIALSIYMTLRMLAGVWRMGTGTGPWSYLRG*	554

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr8g1151	553	MobiDBLite	consensus disorder prediction	149	168	-	-
	Mtr8g1151	553	MobiDBLite	consensus disorder prediction	122	148	-	-
	Mtr8g1151	553	Pfam	MatE	356	509	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Mtr8g1151	553	Pfam	MatE	198	295	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Mtr8g1151	553	TIGRFAM	matE: MATE efflux family protein	44	523	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Mtr8g1151	553	MobiDBLite	consensus disorder prediction	122	168	-	-
	Mtr8g1151	553	PANTHER	MATE EFFLUX FAMILY PROTEIN	9	552	-	-
	Mtr8g1151	553	CDD	MATE_DinF_like	36	543	IPR044644	-
	Mtr8g1151	553	PANTHER	PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED	9	552	IPR044644	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr8g1151	Mtr-Chr8	14084707	14090527	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr8g1151	K03327		-	gmx:100792203	756.903

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr3g0692	3	9811410	9820038	Mtr8g1151	8	14084707	14090527	ECH
	Mtr8g1151	8	14084707	14090527	Mtr8g1151	8	14084707	14090527	ECH