Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1143 ATGGCTCACAAAATAACCAAAAAAGAAGAAACAGAATTCCAAGTTCCTGAAACAATAACACCACCATGCATCAACCCAACACAAACAACAACAACACCAACAACAACCACAACAACAACGTTAACAGAACCATCTAGATTCTTTGAAGACAAATCATCTAAAGCCAGATCTGCCACGTCATCATTTTCACAAAAGAGATCTCACCCAAGCAACGATGATTCAAATGTTCAACCTCAAACAACGTCGTCAGAAGCAAAACGCGCCGTGAATCGTTGCTCCGGTTGTCGGAAGAGAGTCGGTCTTACCGGATTCCGTTGCCGATGCGGTGATCTTTTCTGCTCCGAGCATCGTTACTCCGATCGTCATGATTGTTCGTATGATTATAAAGCTGCTGGAAGAGAATCTATTGCTAGAGAAAATCCTGTTGTTAAAGCTGCGAAGATCGTTAAGCTCTGA 456 0.4254 MAHKITKKEETEFQVPETITPPCINPTQTTTTPTTTTTTTLTEPSRFFEDKSSKARSATSSFSQKRSHPSNDDSNVQPQTTSSEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKAAGRESIARENPVVKAAKIVKL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1143 151 MobiDBLite consensus disorder prediction 1 89 - -
Mtr8g1143 151 ProSiteProfiles Zinc finger AN1-type profile. 86 132 IPR000058 GO:0008270
Mtr8g1143 151 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 150 - -
Mtr8g1143 151 SMART AN1_Zf_4 92 129 IPR000058 GO:0008270
Mtr8g1143 151 MobiDBLite consensus disorder prediction 18 46 - -
Mtr8g1143 151 MobiDBLite consensus disorder prediction 54 88 - -
Mtr8g1143 151 Pfam AN1-like Zinc finger 92 129 IPR000058 GO:0008270
Mtr8g1143 151 SUPERFAMILY AN1-like Zinc finger 75 145 IPR035896 -
Mtr8g1143 151 Gene3D - 60 147 IPR035896 -
Mtr8g1143 151 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1143 Mtr-Chr8 13928092 13928960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1143 80 151 C2H2 Transcription Factor Family AT3G52800 61.111 1.13e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1143 - - lja:Lj3g3v0478150.1 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0673 3 9345951 9346999 Mtr8g1143 8 13928092 13928960 ECH
Mtr8g1143 8 13928092 13928960 Mtr8g1143 8 13928092 13928960 ECH