Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1137 ATGGACAAGGGACCACCTCCTACCCTCTTTGTCAATGATGGTTCGTTTATGGAGAGGTTCAGGCAGCTCCAACAAGAGCAGGAGAGGGGGAAAAATGCCAAGCCAGAGGACTCTAAACCAATTAAAGTTGTTTCAGGACCTCTGACTCCCAAACCCTCCATTAGTAAGGCTAATGATGCAAAGAAATCTTCACAGGGTGGTTCCAGTGGCAAACTTGCTTTCAGCTTGAAACAAAAGTCAAAGCTAGTACCACCCCCTGTTAAGTTGGCTGATGACGATGAAGATGAAATAGATGCTGGGTATGTTTCAATTGATGCACCGACAAAACGGCAAAAATTGGGTCAGGATGACGGCATTGAGCAATCATCAAGACAACTTGATGTTGCACCTCCTCCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCCATTTGAGGATGTTACACGGCAAAAAAACCCTGGAGACTCACCTTTCAAGTTTTTATTTGATGTTAAATGTTCTGACTATAAATATTATGAACATCGGCTTGCTCAAGAGGAGAAGGCCCTTTCCCAGTCCAACGAACCACAGGCATATCAAAATGGGACAAGCGTTCCATCTTCCAGACCAACAAATGGTCCTCAGAGATCGTCCCAGCAGCAGTCAACTTACCAAATCCCTGCCTCTGCTTTATATGATAGTGCTGACGTACCAAGGGGTTCTGGATCTGCAGGACAAGCATTTTCAGTTGGAAGCTCGGATGAGCCCGGTGGATCATCAAAGGCCAATTCTTTAGCACTAATGGAGTTTTACATGAAGAAAGCCGCACAGGAAGAAAAGTTCAAACAACCTAGGCATTCAAAAGATGAGATGCCCCCTCCTCCATCTCTTCAAGGCTCAACTTATGATGCTTCAGCTTCAGCTTCAGGGAAAAAAGGCCATCACATGGGTGATTATATTCCTCAGGAAGAACTGGAGAAGTTCTTGGCTAGCTGTAACGACGCAGCAGCTATGAAAGCTGCAAAGGAGGCTGCTGAGAGGGCCAAAATTCAGGCTGATAATGTGGGCCACAAGCTTTTATCAAAAATGGGTTGGAAAGAAGGCGAGGGTCTAGGGGGCTCTAGGAAGGGTATTGCAGATCCTATAATGGCAGGCAGTGTTAAGAAAGATAACTTGGGAGTAGGTGCTGTCCAACCCGGGGAGGTGACTCCTGAGGATGACATCTATGAGCAGTATAAAAAGCGGATGATGCTTGGCTACCGTCACAGGCCAAATCCTCTGAACAATCCTCGCAAGGCTTACTACTGA 1323 0.4603 MDKGPPPTLFVNDGSFMERFRQLQQEQERGKNAKPEDSKPIKVVSGPLTPKPSISKANDAKKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSIDAPTKRQKLGQDDGIEQSSRQLDVAPPPPSDPTVKKVADKLASFVAKNGRPFEDVTRQKNPGDSPFKFLFDVKCSDYKYYEHRLAQEEKALSQSNEPQAYQNGTSVPSSRPTNGPQRSSQQQSTYQIPASALYDSADVPRGSGSAGQAFSVGSSDEPGGSSKANSLALMEFYMKKAAQEEKFKQPRHSKDEMPPPPSLQGSTYDASASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEAAERAKIQADNVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGSVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1137 440 MobiDBLite consensus disorder prediction 281 319 - -
Mtr8g1137 440 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 440 IPR040169 -
Mtr8g1137 440 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Mtr8g1137 440 MobiDBLite consensus disorder prediction 24 38 - -
Mtr8g1137 440 Gene3D Surp module 113 198 IPR035967 GO:0003723|GO:0006396
Mtr8g1137 440 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Mtr8g1137 440 MobiDBLite consensus disorder prediction 24 139 - -
Mtr8g1137 440 Pfam G-patch domain 358 401 IPR000467 GO:0003676
Mtr8g1137 440 MobiDBLite consensus disorder prediction 56 75 - -
Mtr8g1137 440 MobiDBLite consensus disorder prediction 194 234 - -
Mtr8g1137 440 Pfam Surp module 140 190 IPR000061 GO:0003723|GO:0006396
Mtr8g1137 440 ProSiteProfiles G-patch domain profile. 357 404 IPR000467 GO:0003676
Mtr8g1137 440 SUPERFAMILY Surp module (SWAP domain) 123 196 IPR035967 GO:0003723|GO:0006396
Mtr8g1137 440 MobiDBLite consensus disorder prediction 250 265 - -
Mtr8g1137 440 MobiDBLite consensus disorder prediction 192 267 - -
Mtr8g1137 440 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 440 - -
Mtr8g1137 440 SMART G-patch_5 355 402 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1137 Mtr-Chr8 13862682 13888082 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1137 343 440 C2H2 Transcription Factor Family AT5G26610 31.858 5.29e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1137 K13096 - gmx:100786213 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1137 8 13862682 13888082 Mtr8g1137 8 13862682 13888082 ECH