Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1135 ATGCAGTCACTACAATCCTTTGTTTTCATCTTAATATTTTTAGTACTTGCTTTTGATGTTTGTGAATCACAAGATTGTAGCAGTCCTTTCAAGATCATTACAGTCAGTGAATCAGGCGAAACAAATTTCCAAACAATTCAAAGTGCCATTGATTCTGTCCCTGATGGAAATTCTCAATGGATTCACATCCAAATTTCCCCTGGTGTTTATAGAGAGCAAATCTTTATTCGCAAGAGCAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAGTTCAACGAGTATTGAATGGAGTACACATGAGGATGCTACTTTCGTATCAAAAGCAAATAATACTGTTGCAAAGGGGATTACTTTCACGAATACATTGAACAACCCAGTATTATCAGAGGTCAGTAACATCATACCAGCCAAAGCTTTTCGAATACATGCAGATAAATGTGCTTTCTTTAGTTGTGCTTTTCTTGGGGTACAAGATACCCTATGTGATGATTATGGTCGCCATTACTACAATAATTGTTACATCCAAGGTGGAACTGATTTCATATATGGGGATGGCCAATCACTTTTTGAGGCATGTACAATACTTTTTTCAATGGGAAAATATGGTCCCAAAAGAGATGGGGTTATTACAGCACATGAAAGGGATTCACCAAATGATCCAAGTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGAACAGGAGGAAATGTTCAACTTGGAAGGGCAATGGGTGCTTATGCAAGAGTCATCATAACTGATTCATATCTATCAGATGTTGTTAGGCCTGAGGGTTGGAGCCCTAGAACCTATGTTGGCCATGAAGAAAACCTTACTTTTGTGGAAGAGGGATGTACAGGACCTGGAGCAAACAAATCGGAGCGTGTTAAATGGATGAAACACTTGAGTCAACCTGAACTTGATCAATTCTTGAATATCTCTTTTATTGATGAAGAAGGGTGGATTTCAAAATTGCCAACAACTTTTAGGAGGGTGGGAGATGGTGCAGACATTGATTTTTGGCGTGATCGTTGGTGCGGAGATGTTCCACTGTGTGACCGGTTTAGGCGCCTTTTTGACTTGAATGTTAACAAATCAATTTCAGTTAGGAATATGTTCTTGTTGGGGGTGGATGTGGGTGGGGAGGCGTTGCGGTGGCGTAGGCGGTTGTGGGCTTGGGAGGAGGAGTTGGTAGAGGAGTGTAGGGTTTTATTACTAACAATTTCTTTGCAGGAATCAGTGACAGACAGATGGCTTTGGTTACCTAATCAGGAGGGTGGGTATTCTTGCATTATGGCCAATGGTGCGGGCATGGCTAGGAGTGGTAGGGGTCGAATCTCAATCAACTTCAGATCATTGTCTGCAATTTATTAA 1374 0.4076 MQSLQSFVFILIFLVLAFDVCESQDCSSPFKIITVSESGETNFQTIQSAIDSVPDGNSQWIHIQISPGVYREQIFIRKSKPCIYLEGAGSSSTSIEWSTHEDATFVSKANNTVAKGITFTNTLNNPVLSEVSNIIPAKAFRIHADKCAFFSCAFLGVQDTLCDDYGRHYYNNCYIQGGTDFIYGDGQSLFEACTILFSMGKYGPKRDGVITAHERDSPNDPSGFVFKNCNISGTGGNVQLGRAMGAYARVIITDSYLSDVVRPEGWSPRTYVGHEENLTFVEEGCTGPGANKSERVKWMKHLSQPELDQFLNISFIDEEGWISKLPTTFRRVGDGADIDFWRDRWCGDVPLCDRFRRLFDLNVNKSISVRNMFLLGVDVGGEALRWRRRLWAWEEELVEECRVLLLTISLQESVTDRWLWLPNQEGGYSCIMANGAGMARSGRGRISINFRSLSAIY* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1135 457 Gene3D - 31 331 IPR012334 -
Mtr8g1135 457 Pfam Pectinesterase 33 317 IPR000070 GO:0030599|GO:0042545
Mtr8g1135 457 SUPERFAMILY Pectin lyase-like 31 329 IPR011050 -
Mtr8g1135 457 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 328 - -
Mtr8g1135 457 PANTHER PECTINESTERASE 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1135 Mtr-Chr8 13835939 13840000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1135 28 323 Carbohydrate Esterase AT5G47500 37.621 7.44e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1135 - - cam:101494460 507.679