Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1128 ATGGAAGGAAGAGAAGGTATCAATCCTGCGGTTACGGTGATAGCGCCAGAAGCTCCATCCGCATATCATGTCGCACCAAGGAATGAAGTTCCAGACCAAGTTCATAACCCTGAAGTAGCCACAGCTGCAGCAGCAGGAGGTTCTACTGCGGCTCCTGCTGCTGCTAATGTCGGTGTTTCCCCGGTGAGTGTTGGTTTGGATGGAACAGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGTCTGTCAACATGCCATTGTCACCGTTGCCTATCTCATCTTCAGCTCCGCCTTCTTCTAAAGACTTCTCATCCATGAAGCAAGTGAAACCACAGGGGATGGAATACAAGAGGGCGAAAAAATTTGTGATGGATCATCTAGGTGAAATGAATGGACACTCTGATGGTACAAACTTTATGCCGCATTTCATCACTGTCAATGCCGGCGAGGATATTACAAATAAGGTGATATCATTTTCACAACAAGGGCCGCGAGCAATATGTGTCTTATCGGCTACTGGAGTGATTTCAAATGTGACTCTCCGTCATCCAGATTCTTCTGGGGGTACTTTGACCTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGATAATAACCAAGGAACAAGAAGCAGGGCAGGTGGAATGAGTGTCTCACTGGCAAGCCCTGATGGTCGCGTAGTAGGCGGCGGAGTTGCTGGTGTTCTTATAGCTGCCACTCCTGTGCAGGTGGTGGTGGGAAGCTTTCTGCCTAGCGGCCATCAAGATCAGAAAATAAAGAAACCTAAGTCTGATTATGCAACAGCCACATTTACTCAGGCCATTGCGGTATCTGCAGCACCTCCGCCACCCCAAACTAATAATGCTGAAAAAGAGGATGCCATGGGTGGCGGTGGACATGTACTGCAAAATTCTGGAACCCTTAACTCAAATTTCACTTCTCCTCCGCCCACCGCCTTTCGAAGGGAGAACTGGGTCAACATGCACTCTATCCCGGACACAAGAAAAGCGGCTACTGATATTAACATATCTTTGCCTGATAATTAA 1074 0.4758 MEGREGINPAVTVIAPEAPSAYHVAPRNEVPDQVHNPEVATAAAAGGSTAAPAAANVGVSPVSVGLDGTVKKKRGRPRKYGPDGSVNMPLSPLPISSSAPPSSKDFSSMKQVKPQGMEYKRAKKFVMDHLGEMNGHSDGTNFMPHFITVNAGEDITNKVISFSQQGPRAICVLSATGVISNVTLRHPDSSGGTLTYEGRFEILSLSGSFMPTDNNQGTRSRAGGMSVSLASPDGRVVGGGVAGVLIAATPVQVVVGSFLPSGHQDQKIKKPKSDYATATFTQAIAVSAAPPPPQTNNAEKEDAMGGGGHVLQNSGTLNSNFTSPPPTAFRRENWVNMHSIPDTRKAATDINISLPDN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1128 357 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 356 - -
Mtr8g1128 357 Gene3D - 144 276 - -
Mtr8g1128 357 MobiDBLite consensus disorder prediction 287 308 - -
Mtr8g1128 357 MobiDBLite consensus disorder prediction 67 113 - -
Mtr8g1128 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 356 IPR039605 GO:0003680
Mtr8g1128 357 MobiDBLite consensus disorder prediction 90 110 - -
Mtr8g1128 357 ProSiteProfiles PPC domain profile profile. 139 281 IPR005175 -
Mtr8g1128 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 262 - -
Mtr8g1128 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 144 258 IPR005175 -
Mtr8g1128 357 CDD DUF296 144 258 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1128 Mtr-Chr8 13777138 13783053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g1128 11 289 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.592 7.32e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1128 - - gmx:100793726 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1871 7 34777525 34781584 Mtr8g1128 8 13777138 13783053 PCT